Skip to main content
crop-pal logo
Sorghum
Search for another protein from :
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:
  • plastid 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plasma membrane
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
MultiLoc:golgi
Predotar:mitochondrion
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os05t0137200-01 Rice plasma membrane 29.98 88.04
TraesCS1D01G082900.2 Wheat cytosol, peroxisome, plasma membrane 86.66 78.37
TraesCS1B01G099000.1 Wheat cytosol, peroxisome, plasma membrane 86.48 78.27
TraesCS1A01G081300.1 Wheat unclear 86.22 77.98
HORVU1Hr1G017460.3 Barley plasma membrane 86.31 77.63
KXG32330 Sorghum plastid 85.7 77.27
PGSC0003DMT400011703 Potato cytosol 11.01 76.05
GSMUA_Achr8P29860_001 Banana endoplasmic reticulum 68.72 71.7
GSMUA_Achr1P25070_001 Banana plasma membrane 56.24 71.63
VIT_07s0005g02660.t01 Wine grape cytosol, peroxisome, plasma membrane 72.79 64.76
KRH69152 Soybean cytosol, peroxisome, plasma membrane 71.14 64.04
KRH33644 Soybean cytosol, peroxisome, plasma membrane 70.88 63.81
KRH19486 Soybean cytosol, peroxisome, plasma membrane 69.84 63.27
VIT_05s0020g00890.t01 Wine grape cytosol, peroxisome, plasma membrane 70.8 63.14
CDY24379 Canola plasma membrane 63.95 63.13
CDY25095 Canola cytosol 65.68 62.85
CDX67881 Canola cytosol 65.34 62.78
CDY27510 Canola cytosol 65.16 62.72
PGSC0003DMT400018820 Potato cytosol, peroxisome, plasma membrane 69.84 62.63
KRH02481 Soybean plasma membrane 68.98 62.43
CDY48003 Canola cytosol 64.47 62.42
CDX80072 Canola cytosol 64.73 62.35
AT2G47000.1 Thale cress cytosol, peroxisome, plasma membrane 68.72 61.66
KRH68334 Soybean cytosol, peroxisome, plasma membrane 68.54 61.65
Solyc06g009280.1.1 Tomato cytosol, peroxisome, plasma membrane 68.8 61.6
CDY37776 Canola cytosol, peroxisome, plasma membrane 66.2 61.46
CDY20842 Canola endoplasmic reticulum, golgi, plasma membrane 62.39 61.43
PGSC0003DMT400018812 Potato cytosol, peroxisome, plasma membrane 64.47 61.39
CDY51307 Canola cytosol, peroxisome, plasma membrane 67.16 61.31
Bra004484.1-P Field mustard cytosol 68.2 61.29
Bra003490.1-P Field mustard cytosol, nucleus, plasma membrane 68.37 61.07
AT3G62150.2 Thale cress cytosol, nucleus, plasma membrane 68.54 61.03
Bra040475.1-P Field mustard cytosol 67.85 60.84
CDX89963 Canola cytosol, nucleus, plasma membrane 66.64 60.84
Bra030503.1-P Field mustard cytosol, peroxisome, plasma membrane 67.24 60.81
CDY15432 Canola cytosol 64.38 60.7
AT1G02520.1 Thale cress cytosol, peroxisome, plasma membrane 67.07 60.56
CDY15249 Canola cytosol, peroxisome, plasma membrane 66.46 60.39
AT4G01830.1 Thale cress golgi, plasma membrane, vacuole 63.95 60.0
Bra033331.1-P Field mustard cytosol, nucleus, plasma membrane 65.68 59.87
AT4G01820.1 Thale cress peroxisome, plasma membrane, vacuole 63.43 59.56
Bra002094.1-P Field mustard cytosol, peroxisome, plasma membrane 63.0 59.06
KRH02482 Soybean cytosol, peroxisome, plasma membrane 66.03 58.48
KRH19480 Soybean plasma membrane 60.92 58.29
Bra003445.1-P Field mustard peroxisome 62.91 57.89
Solyc06g009290.2.1 Tomato nucleus 69.93 57.64
CDY58790 Canola peroxisome 61.27 57.43
KRH02484 Soybean plasma membrane 62.48 56.95
CDY51560 Canola peroxisome 61.44 56.67
Solyc12g098840.1.1 Tomato peroxisome 62.05 55.94
KRH19479 Soybean plasma membrane 62.22 55.27
KXG33192 Sorghum cytosol 60.4 54.93
PGSC0003DMT400011930 Potato peroxisome 61.09 54.78
KXG35311 Sorghum plasma membrane 58.32 53.63
KXG32655 Sorghum peroxisome 59.79 53.45
Solyc11g067300.1.1 Tomato plasma membrane 57.54 52.7
EES01319 Sorghum cytosol 56.67 51.33
PGSC0003DMT400019085 Potato plasma membrane 55.2 49.23
EES12287 Sorghum cytosol, peroxisome, plasma membrane 44.37 40.57
EES05688 Sorghum plasma membrane 44.28 40.56
OQU84543 Sorghum endoplasmic reticulum, plasma membrane 43.41 40.53
EES12952 Sorghum cytosol, peroxisome, plasma membrane 44.02 40.13
EES05229 Sorghum plasma membrane 42.55 39.47
OQU78384 Sorghum plasma membrane 57.28 35.05
OQU79903 Sorghum peroxisome 38.21 34.81
OQU79902 Sorghum nucleus, peroxisome, plasma membrane 37.78 34.6
OQU80682 Sorghum plasma membrane 44.19 33.1
KXG34231 Sorghum cytosol, plasma membrane, vacuole 39.25 32.33
EER92449 Sorghum plasma membrane 39.51 32.27
KXG25805 Sorghum peroxisome, plastid 38.73 28.88
Protein Annotations
MapMan:24.1.3.1.1Gene3D:3.40.50.300UniProt:A0A1Z5R0Q4InterPro:AAA+_ATPaseInterPro:ABC1_TM_domInterPro:ABC1_TM_sf
InterPro:ABC_transporter-likeInterPro:ABC_transporter_CSGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215
GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085InterPro:IPR003439
InterPro:IPR011527InterPro:IPR036640EnsemblPlants:OQU77362ProteinID:OQU77362ProteinID:OQU77362.1InterPro:P-loop_NTPase
PFAM:PF00005PFAM:PF00664ScanProsite:PS00211PFscan:PS50893PFscan:PS50929PANTHER:PTHR24221
PANTHER:PTHR24221:SF292SMART:SM00382EnsemblPlantsGene:SORBI_3009G034500SUPFAM:SSF52540SUPFAM:SSF90123TMHMM:TMhelix
UniParc:UPI000B8BB0A9SEG:seg::::
Description
hypothetical protein
Coordinates
chr9:+:3158508..3164909
Molecular Weight (calculated)
124561.0 Da
IEP (calculated)
7.320
GRAVY (calculated)
0.119
Length
1154 amino acids
Sequence
(BLAST)
0001: MITGERQAAR IRGLYLGAIL RQEVAFFDQR ATTGEVVGRM SGDTVLIQDA MGEKVGKCIQ LLVAFAGGFA VAFAQGWLLA LVMLATIPPL VLAGALMSSV
0101: VARMASLGQA AYADAAGVVD QTIGSITTVA SFTGEQRAVE KYSSSLKRAY SSGVWEGLAA GVGMGIVMVL LFCGYSLGIW YGAKLILDKG YTGAQVMNVI
0201: FAVLTGSLAL GQASPSMKAF AGGQAAAYKM FETINREPEI DAYSTAGRKL DDIQGDIEFR DVYFSYPTRP DEQIFSGFSL TIQSGTTVAL VGQSGSGKST
0301: VISLIERFYD PQLGEVLIDG VDLREFQLRW IRSKIGLVSQ EPVLFTASIR DNIAYGKYNA TDEEIRAAAE LANASKFIDK MPQGFATSVG EHGTQLSGGQ
0401: KQRIAIARAI LKDPRILLLD EATSALDTES ERIVQEALDR VMTNRTTVIV AHRLSTVRNA GTIAVIHRGS VVEKGSHHDL IRDPEGAYSQ LIQLQEASHA
0501: SEGANYQNKS NRKGDSGIHL GKQMSTNQSP SQRSPQNNSS NHSFSVSHGV PLEIDVQNSS SKNIDEEIQH EVPLSRLASL NKPEIPVLIL GSIASAVSGM
0601: IFPIFAILLS NVIKAFYEPP RILRKDAEFW SSMFLVFGAV YFLSLPLGSY LFSVAGCKLI RRIRLMTFEK VVNMEIEWFD YPENSSGAIG ARLSADAAKV
0701: RGLVGDALQL VVQNLATLVA GLVIAFVSNW ELSLIILALI PLIGLNGWIQ MKFIQGFSAD AKLMYEEASQ VATDAVSSIR TVASFSAEEK VMDLYKKKCE
0801: GPLRAGIRTG ITNGIGFGVS FFLLFGVYAA SFYAGARLVE NDKTTFPKVF RVFLALSMAA IGVSHTSTLT SDSSKAKSAV SSIFAIMDRK SRIDPSDDAG
0901: VTLEPLSGNI EFRHVRFRYP TRPDVQIFQD LCLTIQSGKT VALVGESGSG KSTAIALLQR FYDPNAGHIL LDGVDIQKFQ LRWLRQQMGL VSQEPSLFND
1001: TIRANIAYGK DGQATELDIV AAARLANAHK FISSLHQGYD TMVGERGAQL SGGQKQRVAI ARAIIKDPKI LLLDEATSAL DAESERSVQD ALDRVMVNRT
1101: TVIVAHRLST IQGADVIAVV KDGVIVEKGR HDALIKIEGG AYASLVALHS AAPS
Best Arabidopsis Sequence Match ( AT2G47000.1 )
(BLAST)
0001: MASESGLNGD PNILEEVSET KRDKEEEEEV KKTEKKDEEH EKTKTVPFYK LFAFADSFDF LLMILGTLGS IGNGLGFPLM TLLFGDLIDA FGENQTNTTD
0101: KVSKVALKFV WLGIGTFAAA FLQLSGWMIS GERQAARIRS LYLKTILRQD IAFFDIDTNT GEVVGRMSGD TVLIQDAMGE KVGKAIQLLA TFVGGFVIAF
0201: VRGWLLTLVM LSSIPLLVMA GALLAIVIAK TASRGQTAYA KAATVVEQTI GSIRTVASFT GEKQAISNYN KHLVTAYKAG VIEGGSTGLG LGTLFLVVFC
0301: SYALAVWYGG KLILDKGYTG GQVLNIIIAV LTGSMSLGQT SPCLSAFAAG QAAAYKMFET IERRPNIDSY STNGKVLDDI KGDIELKDVY FTYPARPDEQ
0401: IFRGFSLFIS SGTTVALVGQ SGSGKSTVVS LIERFYDPQA GDVLIDGINL KEFQLKWIRS KIGLVSQEPV LFTASIKDNI AYGKEDATTE EIKAAAELAN
0501: ASKFVDKLPQ GLDTMVGEHG TQLSGGQKQR IAVARAILKD PRILLLDEAT SALDAESERV VQEALDRIMV NRTTVVVAHR LSTVRNADMI AVIHQGKIVE
0601: KGSHTELLKD PEGAYSQLIR LQEEKKSDEN AAEEQKMSSI ESFKQSSLRK SSLGRSLSKG GSSRGNSSRH SFNMFGFPAG IDGNVVQDQE EDDTTQPKTE
0701: PKKVSIFRIA ALNKPEIPVL ILGSISAAAN GVILPIFGIL ISSVIKAFFQ PPKKLKEDTS FWAIIFMVLG FASIIAYPAQ TFFFAIAGCK LVQRIRSMCF
0801: EKVVHMEVGW FDEPENSSGT IGARLSADAA TIRGLVGDSL AQTVQNLSSI LAGLIIAFLA CWQLAFVVLA MLPLIALNGF LYMKFMKGFS ADAKKMYGEA
0901: SQVANDAVGS IRTVASFCAE DKVMNMYSKK CEGPMKNGIR QGIVSGIGFG FSFFVLFSSY AASFYVGARL VDDGKTTFDS VFRVFFALTM AAMAISQSSS
1001: LSPDSSKADV AAASIFAIMD RESKIDPSVE SGRVLDNVKG DIELRHVSFK YPARPDVQIF QDLCLSIRAG KTVALVGESG SGKSTVIALL QRFYDPDSGE
1101: ITLDGVEIKS LRLKWLRQQT GLVSQEPILF NETIRANIAY GKGGDASESE IVSSAELSNA HGFISGLQQG YDTMVGERGI QLSGGQKQRV AIARAIVKDP
1201: KVLLLDEATS ALDAESERVV QDALDRVMVN RTTIVVAHRL STIKNADVIA VVKNGVIVEK GKHDTLINIK DGVYASLVQL HLTAAS
Arabidopsis Description
ABCB4ABC transporter B family member 4 [Source:UniProtKB/Swiss-Prot;Acc:O80725]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.