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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 1
  • peroxisome 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:peroxisome
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY20842 Canola endoplasmic reticulum, golgi, plasma membrane 96.41 96.16
Bra002094.1-P Field mustard cytosol, peroxisome, plasma membrane 94.95 90.17
CDY58790 Canola peroxisome 87.85 83.43
CDY51560 Canola peroxisome 88.37 82.57
AT4G01830.1 Thale cress golgi, plasma membrane, vacuole 83.23 79.11
AT4G01820.1 Thale cress peroxisome, plasma membrane, vacuole 82.04 78.03
CDX89963 Canola cytosol, nucleus, plasma membrane 78.1 72.23
CDY51307 Canola cytosol, peroxisome, plasma membrane 77.67 71.84
CDY15249 Canola cytosol, peroxisome, plasma membrane 77.93 71.73
CDY15432 Canola cytosol 74.85 71.49
Os05t0137200-01 Rice plasma membrane 23.44 69.72
GSMUA_Achr8P29860_001 Banana endoplasmic reticulum 63.56 67.18
CDY25095 Canola cytosol 67.66 65.59
CDX67881 Canola cytosol 67.24 65.45
CDY27510 Canola cytosol 66.81 65.14
GSMUA_Achr1P25070_001 Banana plasma membrane 50.47 65.12
VIT_07s0005g02660.t01 Wine grape cytosol, peroxisome, plasma membrane 71.94 64.84
CDX80072 Canola cytosol 66.38 64.77
CDY48003 Canola cytosol 65.61 64.35
CDY37776 Canola cytosol, peroxisome, plasma membrane 68.09 64.04
OQU77362 Sorghum mitochondrion, plasma membrane 63.13 63.95
PGSC0003DMT400018820 Potato cytosol, peroxisome, plasma membrane 70.06 63.64
KRH69152 Soybean cytosol, peroxisome, plasma membrane 69.63 63.49
KRH33644 Soybean cytosol, peroxisome, plasma membrane 69.46 63.34
KRH68334 Soybean cytosol, peroxisome, plasma membrane 68.78 62.67
Solyc06g009280.1.1 Tomato cytosol, peroxisome, plasma membrane 67.75 61.44
PGSC0003DMT400018812 Potato cytosol, peroxisome, plasma membrane 63.05 60.81
Zm00001d008178_P001 Maize cytosol, peroxisome, plasma membrane, plastid 65.53 59.94
KXG32330 Sorghum plastid 65.61 59.92
CDX84897 Canola cytosol 5.9 58.47
CDY35168 Canola golgi, peroxisome, plasma membrane 54.32 58.2
TraesCS1A01G081300.1 Wheat unclear 63.3 57.99
TraesCS1B01G099000.1 Wheat cytosol, peroxisome, plasma membrane 63.05 57.8
Solyc06g009290.2.1 Tomato nucleus 69.2 57.79
TraesCS1D01G082900.2 Wheat cytosol, peroxisome, plasma membrane 63.05 57.76
Zm00001d040562_P002 Maize cytosol, peroxisome, plasma membrane 65.61 57.45
HORVU1Hr1G017460.3 Barley plasma membrane 62.79 57.21
CDX86437 Canola cytosol 7.1 55.7
GSMUA_Achr9P16700_001 Banana plasma membrane 59.45 54.72
CDX86442 Canola cytosol, mitochondrion, plastid 2.99 51.47
CDX93393 Canola plasma membrane 43.28 41.31
CDY37953 Canola plasma membrane 43.2 41.22
CDX94395 Canola plasma membrane 43.37 41.09
CDX86408 Canola plasma membrane 43.37 40.99
CDY00109 Canola plasma membrane 43.63 40.96
CDY20012 Canola plasma membrane 43.71 40.78
CDY65012 Canola plasma membrane 43.54 40.62
CDX92739 Canola plasma membrane 42.94 40.45
CDX89380 Canola plasma membrane 43.37 39.76
CDY27639 Canola plasma membrane 41.06 39.41
CDX86445 Canola plasma membrane 41.32 38.83
CDY04018 Canola plasma membrane 40.63 38.28
CDX85192 Canola plasma membrane 41.4 38.14
CDY46744 Canola cytosol, peroxisome, plasma membrane 43.11 37.67
CDX79704 Canola plasma membrane 43.11 37.58
CDY42770 Canola golgi, plasma membrane, vacuole 36.44 37.53
CDX84896 Canola plasma membrane 31.82 35.39
CDY64952 Canola peroxisome, plasma membrane, vacuole 28.23 33.5
CDY20443 Canola cytosol, mitochondrion, plasma membrane 38.24 31.91
CDY24958 Canola mitochondrion, plasma membrane, plastid 37.98 31.83
CDY07647 Canola cytosol 37.9 31.62
CDY53591 Canola cytosol, mitochondrion, plasma membrane 38.07 31.61
CDY65312 Canola cytosol 37.55 31.38
CDX76106 Canola cytosol, golgi, peroxisome 37.3 31.14
CDY21871 Canola endoplasmic reticulum, plasma membrane 1.45 23.61
Protein Annotations
Gene3D:1.20.1560.10MapMan:24.1.3.1.1Gene3D:3.40.50.300GO:A0A078GGB8UniProt:A0A078GGB8InterPro:AAA+_ATPase
InterPro:ABC1_TM_domInterPro:ABC1_TM_sfInterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEnsemblPlants:CDY24379ProteinID:CDY24379
ProteinID:CDY24379.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00026600001InterPro:IPR003439
InterPro:IPR011527InterPro:IPR036640InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664ScanProsite:PS00211
PFscan:PS50893PFscan:PS50929PANTHER:PTHR24221PANTHER:PTHR24221:SF292SMART:SM00382SUPFAM:SSF52540
SUPFAM:SSF90123TMHMM:TMhelixUniParc:UPI0004EE0E76SEG:seg::
Description
BnaA07g03040DBnaA07g03040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GGB8]
Coordinates
chrLK032157:-:562163..567562
Molecular Weight (calculated)
126865.0 Da
IEP (calculated)
7.669
GRAVY (calculated)
0.185
Length
1169 amino acids
Sequence
(BLAST)
0001: MFSPVLEVSC WVITGERQAA RIRSLYLKTI LRQDIVFFDV ETNTGEVVGR MSGDTVLILD AMGEKVGKFI QLFVTFLGGY ALAFVKGWLL TLVMLTSIPL
0101: LAMAGAAMSL IFTKASSQQQ AAYAKASTIV EQTCGSIRTV ASFTGEKQAT SSYKELINSA YKSSVKQGLS TGLGFGVMFL VFFCSYALAI WFGGEMILRK
0201: GYTGGAVINV MIIVVASSMD NIPHRSVKII KQCMSEMNQF ARSLGQAAPC LTSFAAGQAA AYKMFETIKR KPVIDSFDLN GKVLEDIQGE IELRDVCFSY
0301: PARPREEVFG GFSLMIPSGK TTALVGESGS GKSTVISLIE RFYDPSSGQV LIDGVDLKEF QLKWIRGKIG LVGQEPVLFS SSIMENIGYG KEGASVQEIE
0401: AAAKLANAAK FIDKLPRGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVL
0501: HRGKIVEEGS HLELLKDHEG AYSQLIRLQE INTESRRLEM SNGSIRNGSS RGNNVSRMHN DDESVSVLGL LAGQENTEKP KDMPQDVSIT RIAALNKPEA
0601: PILILGTLVC ALDGAIFPIF GLLFAKVIIA FFQPPHELRS DSRFWSIIFV LLGVLSLVVY PIHMSLFAVA GGRLIRRIRS MCFEKVVHME VGWFDEPENS
0701: SGAMGARLSA DAALIRTLVG DSLALTVKNV ASAVAGIIIA FAISWELAVI ILVMIPLTGI NNYVQVKFMK GFSADAKTKY EEASQVANDA VGSIRTVASF
0801: CAEEKVIEMY KKRCEDSIKS GTKQGVVAGL GFGLSFFVLY SVYAACFYAG ARLVKDGRTT YNGVFQVFLA LTMTTIGISA ASSFAPDSSK AKSAAASVFG
0901: IIDRKSKIDS RDESGMVLEN VKGDIDFCHI EFAYQTRPDI QIFRDLCLSI RAGKTVALVG ESGSGKSTVI SLLQRFYDPD SGHITLDGVE LKKLQLKWLR
1001: KQMGLVGQEP VLFNDTIRAN IAYGKGGEEA TEAEIVAASE LCNAHKFISS IQQGYDTVVG ERGIQLSGGQ KQRVAIARAI VKEPKILLLD EATSALDAES
1101: ERVVQDALDQ VMVNRTTIVV AHRLSTIKNA DVIAVVKNGV IAEKGTHETL MNIEGGVYAS LVQLHMSAF
Best Arabidopsis Sequence Match ( AT4G01830.1 )
(BLAST)
0001: MKKGNLEANT KTVPFYKLFF FSDSTDVLLM IVGSIGAIAN GVCSPLMTLL FGELIDAMGP NQNNEEIVER VSKVCLSLVY LGLGALGAAF LQVACWMITG
0101: ERQAARIRSL YLKTILRQDI GFFDVEMTTG EVVGRMSGDT VLILDAMGEK VGKFIQLIST FVGGFVIAFL RGWLLTLVML TSIPLLAMSG AAIAIIVTRA
0201: SSQEQAAYAK ASNVVEQTLG SIRTVASFTG EKQAMSSYKE LINLAYKSNV KQGFVTGLGL GVMFLVFFST YALGTWFGGE MILRKGYTGG AVINVMVTVV
0301: SSSIALGQAS PCLTAFTAGK AAAYKMFETI EREPLIDTFD LNGKVLEDIR GEIELRDVCF SYPARPKEEV FGGFSLLIPS GTTTALVGES GSGKSTVISL
0401: IERFYDPNSG QVLIDGVDLK EFQLKWIRGK IGLVSQEPVL FSSSIMENIG YGKEGATVEE IQAASKLANA AKFIDKLPLG LETLVGEHGT QLSGGQKQRI
0501: AIARAILKDP RILLLDEATS ALDAESERVV QEALDRIMVN RTTVIVAHRL STVRNADIIA VIHRGKIVEE GSHSELLKDH EGAYSQLLRL QEINKESKRL
0601: EISDGSISSG SSRGNNSTRQ DDDSFSVLGL LAGQDSTKMS QELSQKVSFT RIAALNKPEI PILILGTLVG AVNGTIFPIF GILFAKVIEA FFKAPHELKR
0701: DSRFWSMIFV LLGVAAVIVY PTTNYLFAIA GGRLIRRIRS MCFEKVVHME VGWFDEPGNS SGAMGARLSA DAALIRTLVG DSLCLSVKNV ASLVTGLIIA
0801: FTASWEVAII ILVIIPFIGI NGYIQIKFMK GFSADAKAKY EEASQVANDA VGSIRTVASF CAEEKVMEMY KKRCEDTIKS GIKQGLISGV GFGISFFVLY
0901: SVYASCFYVG ARLVKAGRTN FNDVFQVFLA LTLTAVGISQ ASSFAPDSSK GKGAAVSIFR IIDRISKIDS RDESGMVLEN VKGDIELCHI SFTYQTRPDV
1001: QVFRDLCLSI RAGQTVALVG ESGSGKSTVI SLLQRFYDPD SGHITLDGVE LKKLRLKWLR QQMGLVGQEP VLFNDTIRAN IAYGKGGEEA TEAEIIAASE
1101: LANAHRFISS IQKGYDTVVG ERGIQLSGGQ KQRVAIARAI VKEPKILLLD EATSALDAES ERVVQDALDR VMVNRTTIVV AHRLSTIKNA DVIAVVKNGV
1201: IAEKGTHETL INIEGGVYAS LVQLHINASN
Arabidopsis Description
ABCB5ABC transporter B family member 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYI3]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.