Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42770 | Canola | golgi, plasma membrane, vacuole | 88.48 | 96.74 |
| CDX94395 | Canola | plasma membrane | 87.35 | 87.84 |
| CDX89380 | Canola | plasma membrane | 87.67 | 85.33 |
| AT4G25960.1 | Thale cress | plasma membrane | 87.51 | 85.31 |
| CDY37953 | Canola | plasma membrane | 77.28 | 78.29 |
| CDX93393 | Canola | plasma membrane | 77.2 | 78.2 |
| VIT_02s0012g01660.t01 | Wine grape | plasma membrane | 75.75 | 75.62 |
| KRH74394 | Soybean | plasma membrane | 74.21 | 73.92 |
| KRH39563 | Soybean | peroxisome | 73.89 | 73.65 |
| Solyc08g076720.2.1 | Tomato | unclear | 73.65 | 72.71 |
| KRH45417 | Soybean | plasma membrane | 73.25 | 72.49 |
| PGSC0003DMT400045176 | Potato | peroxisome | 73.33 | 72.39 |
| EES05688 | Sorghum | plasma membrane | 71.96 | 70.87 |
| Os02t0693700-02 | Rice | plasma membrane | 71.47 | 70.17 |
| Zm00001d051514_P002 | Maize | mitochondrion | 71.23 | 70.05 |
| TraesCS6A01G264900.3 | Wheat | golgi | 71.31 | 69.91 |
| TraesCS6B01G291900.1 | Wheat | peroxisome | 71.07 | 69.83 |
| TraesCS6D01G250000.1 | Wheat | golgi | 70.83 | 69.71 |
| HORVU6Hr1G067170.3 | Barley | endoplasmic reticulum, vacuole | 50.44 | 65.48 |
| HORVU6Hr1G067200.1 | Barley | plastid | 70.83 | 64.87 |
| CDX84897 | Canola | cytosol | 6.04 | 63.56 |
| CDX86437 | Canola | cytosol | 6.93 | 57.72 |
| CDX86442 | Canola | cytosol, mitochondrion, plastid | 2.82 | 51.47 |
| CDX86408 | Canola | plasma membrane | 48.99 | 49.15 |
| CDY00109 | Canola | plasma membrane | 48.75 | 48.59 |
| CDY65012 | Canola | plasma membrane | 48.99 | 48.52 |
| CDY27639 | Canola | plasma membrane | 47.62 | 48.52 |
| CDY20012 | Canola | plasma membrane | 48.91 | 48.44 |
| CDY35168 | Canola | golgi, peroxisome, plasma membrane | 39.81 | 45.28 |
| CDX84896 | Canola | plasma membrane | 38.28 | 45.2 |
| CDY46744 | Canola | cytosol, peroxisome, plasma membrane | 48.35 | 44.84 |
| CDX79704 | Canola | plasma membrane | 48.19 | 44.59 |
| CDX67881 | Canola | cytosol | 42.95 | 44.38 |
| CDY25095 | Canola | cytosol | 43.11 | 44.36 |
| CDY27510 | Canola | cytosol | 42.55 | 44.04 |
| CDY48003 | Canola | cytosol | 42.22 | 43.96 |
| CDX80072 | Canola | cytosol | 41.98 | 43.49 |
| CDY15432 | Canola | cytosol | 42.87 | 43.46 |
| CDX89963 | Canola | cytosol, nucleus, plasma membrane | 44.08 | 43.28 |
| CDY51307 | Canola | cytosol, peroxisome, plasma membrane | 43.92 | 43.12 |
| CDY15249 | Canola | cytosol, peroxisome, plasma membrane | 44.08 | 43.07 |
| CDY24379 | Canola | plasma membrane | 40.45 | 42.94 |
| CDY58790 | Canola | peroxisome | 42.39 | 42.73 |
| CDY20842 | Canola | endoplasmic reticulum, golgi, plasma membrane | 40.13 | 42.49 |
| CDY37776 | Canola | cytosol, peroxisome, plasma membrane | 42.3 | 42.24 |
| CDY51560 | Canola | peroxisome | 41.66 | 41.33 |
| CDX86445 | Canola | plasma membrane | 40.93 | 40.84 |
| CDX85192 | Canola | plasma membrane | 40.93 | 40.03 |
| CDY04018 | Canola | plasma membrane | 39.81 | 39.81 |
| GSMUA_Achr4P17010_001 | Banana | peroxisome | 35.29 | 39.64 |
| CDY24958 | Canola | mitochondrion, plasma membrane, plastid | 41.18 | 36.63 |
| CDY20443 | Canola | cytosol, mitochondrion, plasma membrane | 41.26 | 36.55 |
| CDY07647 | Canola | cytosol | 41.18 | 36.47 |
| CDY53591 | Canola | cytosol, mitochondrion, plasma membrane | 41.18 | 36.29 |
| CDY65312 | Canola | cytosol | 40.61 | 36.03 |
| CDY64952 | Canola | peroxisome, plasma membrane, vacuole | 28.53 | 35.94 |
| CDX76106 | Canola | cytosol, golgi, peroxisome | 40.53 | 35.93 |
| CDY21871 | Canola | endoplasmic reticulum, plasma membrane | 1.69 | 29.17 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | GO:A0A078DWB4 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom |
| InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | EnsemblPlants:CDX92739 | ProteinID:CDX92739 | ProteinID:CDX92739.1 |
| ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00154559001 | InterPro:IPR003439 |
| InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 |
| PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF415 | SMART:SM00382 | SUPFAM:SSF52540 |
| SUPFAM:SSF90123 | TMHMM:TMhelix | UniParc:UPI0004EDF4B4 | SEG:seg | : | : |
Description
BnaC07g39970D
Coordinates
chrLK031873:+:579803..585549
Molecular Weight (calculated)
136695.0 Da
IEP (calculated)
8.419
GRAVY (calculated)
0.149
Length
1241 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEPSHDLATE MEKEKKAATP NVSFLKLFSF ADFNDCVLMT LGSIGACIHG ASVPVFFIFF GKLINIIGTA YMDRHQASHK VAKYSLDFVY LSVVILFSSW
0101: IEVACWMHTG ERQAAKMRRA YLRSMLSQDI SLFDTEASTG EVISAITSDM LVVQDALSEK VGNFLHYISR FIAGFAIGFT SVWQISLVTL AIVPLIALAG
0201: GIYAFVAIGL IARVRKSYIK AGQVAEEVIG NVRTVQAFTG EERAAKLYRG ALKNTYKYGR KAGLMKGLGL GSLHCVLFLS WALLVWFTSV VVHKGIANAG
0301: ESFTTMLNVV IAGLSLGQAA PDISAFVRAK AAAHPIFQMI ERDTAAKTSA KFGRKLRKVD GHIQFTDVTF SYPSRPDVLI FDKLNLAIPA GKMVALVGGS
0401: GSGKSTVISL IERFYEPTSG AVLLDGNDIR ELDIKWLRGH IGLVSQEPAL FATTIRENIM YGKDDATDEE IGRAAKLSEA FSFINNLPEG FETQVGERGI
0501: QLSGGQKQRI AISRAILKNP SILLLDEATS ALDAELEKSV QEALERVMVG KTTVVVAHRL STVRNADIIA VVHEGKIIEF GNHENLISNP DGAYSALLRL
0601: QETASLECNP SLDRTLSRPH SIQYSREQSR TSSCLEKESV TREDGEDQSK EAKVTMRRLY SMIRPDWMYG ICGTLCAFIA GSLMPLFALG VSHSLVSYYE
0701: KGWDNTQKEV KKIAILFCFA SAITLIVHTI EHLCFGIMGE RLTRRVREKM FLAILKNEMG WFDEVDNTSS MLASRLESDA TLLKTIVVDR STILLQNLGL
0801: VVTSFVISFM LNWRLTLVVL ATYPLVISGH ISEKLFMQGY GGNLSKAYLK ANMLAGESVS NIRTVAAFCA EEKVLELYSK ELLEPSKRSF RRGQVAGLFY
0901: GISQFFIFSS YGLALWYGST LMDNKISSFN IVMKTFMVLI VTALAMGETL ALAPDLLKGN QMIASIFEIL DRKSQLVGET SEELTNVEGT IELKGIQFSY
1001: PSRPHVVIFK DFDLIVRSGQ SMALVGQSGS GKSSVISLIL RFYDPTAGTI MIEGKDIKKV DLKALRKHIG LVQQEPALFA TTIYENILYG NEEASHSEVI
1101: ESAMFANAHS FITSLPEGYN TKVGERGVQM SGGQRQRIAI ARAILRNPEI LLLDEATSAL DTVSERVVQQ ALDRLMTNRT TVVIAHRLST IKNADTISVL
1201: HGGKIVQQGS HRWLVLNKVG PYFNLFNLQQ QPAATTSLNT I
0101: IEVACWMHTG ERQAAKMRRA YLRSMLSQDI SLFDTEASTG EVISAITSDM LVVQDALSEK VGNFLHYISR FIAGFAIGFT SVWQISLVTL AIVPLIALAG
0201: GIYAFVAIGL IARVRKSYIK AGQVAEEVIG NVRTVQAFTG EERAAKLYRG ALKNTYKYGR KAGLMKGLGL GSLHCVLFLS WALLVWFTSV VVHKGIANAG
0301: ESFTTMLNVV IAGLSLGQAA PDISAFVRAK AAAHPIFQMI ERDTAAKTSA KFGRKLRKVD GHIQFTDVTF SYPSRPDVLI FDKLNLAIPA GKMVALVGGS
0401: GSGKSTVISL IERFYEPTSG AVLLDGNDIR ELDIKWLRGH IGLVSQEPAL FATTIRENIM YGKDDATDEE IGRAAKLSEA FSFINNLPEG FETQVGERGI
0501: QLSGGQKQRI AISRAILKNP SILLLDEATS ALDAELEKSV QEALERVMVG KTTVVVAHRL STVRNADIIA VVHEGKIIEF GNHENLISNP DGAYSALLRL
0601: QETASLECNP SLDRTLSRPH SIQYSREQSR TSSCLEKESV TREDGEDQSK EAKVTMRRLY SMIRPDWMYG ICGTLCAFIA GSLMPLFALG VSHSLVSYYE
0701: KGWDNTQKEV KKIAILFCFA SAITLIVHTI EHLCFGIMGE RLTRRVREKM FLAILKNEMG WFDEVDNTSS MLASRLESDA TLLKTIVVDR STILLQNLGL
0801: VVTSFVISFM LNWRLTLVVL ATYPLVISGH ISEKLFMQGY GGNLSKAYLK ANMLAGESVS NIRTVAAFCA EEKVLELYSK ELLEPSKRSF RRGQVAGLFY
0901: GISQFFIFSS YGLALWYGST LMDNKISSFN IVMKTFMVLI VTALAMGETL ALAPDLLKGN QMIASIFEIL DRKSQLVGET SEELTNVEGT IELKGIQFSY
1001: PSRPHVVIFK DFDLIVRSGQ SMALVGQSGS GKSSVISLIL RFYDPTAGTI MIEGKDIKKV DLKALRKHIG LVQQEPALFA TTIYENILYG NEEASHSEVI
1101: ESAMFANAHS FITSLPEGYN TKVGERGVQM SGGQRQRIAI ARAILRNPEI LLLDEATSAL DTVSERVVQQ ALDRLMTNRT TVVIAHRLST IKNADTISVL
1201: HGGKIVQQGS HRWLVLNKVG PYFNLFNLQQ QPAATTSLNT I
0001: MYISLIFFLS NHFPPLISIP IFIFLSFSSP TNYTHLKLKK MQPSGDPAPE KEKEMTQPKV SLLKLFSFAD FYDCVLMTLG SVGACIHGAS VPIFFIFFGK
0101: LINIIGLAYL FPKQASHRVA KYSLDFVYLS VAILFSSWLE VACWMHTGER QAAKMRRAYL RSMLSQDISL FDTEASTGEV ISAITSDILV VQDALSEKVG
0201: NFLHYISRFI AGFAIGFTSV WQISLVTLSI VPLIALAGGI YAFVAIGLIA RVRKSYIKAG EIAEEVIGNV RTVQAFTGEE RAVRLYREAL ENTYKYGRKA
0301: GLTKGLGLGS MHCVLFLSWA LLVWFTSVVV HKDIADGGKS FTTMLNVVIA GLSLGQAAPD ISAFVRAKAA AYPIFKMIER NTVTKTSAKS GRKLGKVDGH
0401: IQFKDATFSY PSRPDVVIFD RLNLAIPAGK IVALVGGSGS GKSTVISLIE RFYEPISGAV LLDGNNISEL DIKWLRGQIG LVNQEPALFA TTIRENILYG
0501: KDDATAEEIT RAAKLSEAIS FINNLPEGFE TQVGERGIQL SGGQKQRIAI SRAIVKNPSI LLLDEATSAL DAESEKSVQE ALDRVMVGRT TVVVAHRLST
0601: VRNADIIAVV HEGKIVEFGN HENLISNPDG AYSSLLRLQE TASLQRNPSL NRTLSRPHSI KYSRELSRTR SSFCSERESV TRPDGADPSK KVKVTVGRLY
0701: SMIRPDWMYG VCGTICAFIA GSQMPLFALG VSQALVSYYS GWDETQKEIK KIAILFCCAS VITLIVYTIE HICFGTMGER LTLRVRENMF RAILKNEIGW
0801: FDEVDNTSSM LASRLESDAT LLKTIVVDRS TILLQNLGLV VTSFIIAFIL NWRLTLVVLA TYPLVISGHI SEKLFMQGYG GDLNKAYLKA NMLAGESVSN
0901: IRTVAAFCAE EKILELYSRE LLEPSKSSFR RGQIAGLFYG VSQFFIFSSY GLALWYGSTL MDKGLAGFKS VMKTFMVLIV TALAMGETLA LAPDLLKGNQ
1001: MVASVFEILD RKTQIVGETS EELNNVEGTI ELKGVHFSYP SRPDVVIFRD FDLIVRAGKS MALVGQSGSG KSSVISLILR FYDPTAGKVM IEGKDIKKLD
1101: LKALRKHIGL VQQEPALFAT TIYENILYGN EGASQSEVVE SAMLANAHSF ITSLPEGYST KVGERGVQMS GGQRQRIAIA RAILKNPAIL LLDEATSALD
1201: VESERVVQQA LDRLMANRTT VVVAHRLSTI KNADTISVLH GGKIVEQGSH RKLVLNKSGP YFKLISLQQQ QQP
0101: LINIIGLAYL FPKQASHRVA KYSLDFVYLS VAILFSSWLE VACWMHTGER QAAKMRRAYL RSMLSQDISL FDTEASTGEV ISAITSDILV VQDALSEKVG
0201: NFLHYISRFI AGFAIGFTSV WQISLVTLSI VPLIALAGGI YAFVAIGLIA RVRKSYIKAG EIAEEVIGNV RTVQAFTGEE RAVRLYREAL ENTYKYGRKA
0301: GLTKGLGLGS MHCVLFLSWA LLVWFTSVVV HKDIADGGKS FTTMLNVVIA GLSLGQAAPD ISAFVRAKAA AYPIFKMIER NTVTKTSAKS GRKLGKVDGH
0401: IQFKDATFSY PSRPDVVIFD RLNLAIPAGK IVALVGGSGS GKSTVISLIE RFYEPISGAV LLDGNNISEL DIKWLRGQIG LVNQEPALFA TTIRENILYG
0501: KDDATAEEIT RAAKLSEAIS FINNLPEGFE TQVGERGIQL SGGQKQRIAI SRAIVKNPSI LLLDEATSAL DAESEKSVQE ALDRVMVGRT TVVVAHRLST
0601: VRNADIIAVV HEGKIVEFGN HENLISNPDG AYSSLLRLQE TASLQRNPSL NRTLSRPHSI KYSRELSRTR SSFCSERESV TRPDGADPSK KVKVTVGRLY
0701: SMIRPDWMYG VCGTICAFIA GSQMPLFALG VSQALVSYYS GWDETQKEIK KIAILFCCAS VITLIVYTIE HICFGTMGER LTLRVRENMF RAILKNEIGW
0801: FDEVDNTSSM LASRLESDAT LLKTIVVDRS TILLQNLGLV VTSFIIAFIL NWRLTLVVLA TYPLVISGHI SEKLFMQGYG GDLNKAYLKA NMLAGESVSN
0901: IRTVAAFCAE EKILELYSRE LLEPSKSSFR RGQIAGLFYG VSQFFIFSSY GLALWYGSTL MDKGLAGFKS VMKTFMVLIV TALAMGETLA LAPDLLKGNQ
1001: MVASVFEILD RKTQIVGETS EELNNVEGTI ELKGVHFSYP SRPDVVIFRD FDLIVRAGKS MALVGQSGSG KSSVISLILR FYDPTAGKVM IEGKDIKKLD
1101: LKALRKHIGL VQQEPALFAT TIYENILYGN EGASQSEVVE SAMLANAHSF ITSLPEGYST KVGERGVQMS GGQRQRIAIA RAILKNPAIL LLDEATSALD
1201: VESERVVQQA LDRLMANRTT VVVAHRLSTI KNADTISVLH GGKIVEQGSH RKLVLNKSGP YFKLISLQQQ QQP
Arabidopsis Description
ABCB2ABC transporter B family member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPK2]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.