Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- plasma membrane 4
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH74394 | Soybean | plasma membrane | 82.78 | 82.58 |
| KRH39563 | Soybean | peroxisome | 82.3 | 82.17 |
| PGSC0003DMT400045176 | Potato | peroxisome | 80.85 | 79.95 |
| Solyc08g076720.2.1 | Tomato | unclear | 80.69 | 79.79 |
| KRH45417 | Soybean | plasma membrane | 79.97 | 79.27 |
| CDX94395 | Canola | plasma membrane | 77.88 | 78.44 |
| Bra013936.1-P | Field mustard | plasma membrane | 77.8 | 78.36 |
| AT1G10680.1 | Thale cress | plasma membrane | 76.67 | 77.67 |
| AT4G25960.1 | Thale cress | plasma membrane | 79.32 | 77.45 |
| CDY37953 | Canola | plasma membrane | 75.22 | 76.33 |
| CDX93393 | Canola | plasma membrane | 75.14 | 76.24 |
| CDX89380 | Canola | plasma membrane | 78.04 | 76.08 |
| EES05688 | Sorghum | plasma membrane | 76.91 | 75.87 |
| CDX92739 | Canola | plasma membrane | 75.62 | 75.75 |
| Zm00001d051514_P002 | Maize | mitochondrion | 76.75 | 75.59 |
| Bra019907.1-P | Field mustard | plasma membrane | 74.5 | 75.59 |
| Os02t0693700-02 | Rice | plasma membrane | 76.75 | 75.47 |
| Bra019135.1-P | Field mustard | plasma membrane | 75.14 | 75.26 |
| TraesCS6B01G291900.1 | Wheat | peroxisome | 76.27 | 75.06 |
| TraesCS6D01G250000.1 | Wheat | golgi | 75.86 | 74.78 |
| TraesCS6A01G264900.3 | Wheat | golgi | 76.11 | 74.72 |
| CDY42770 | Canola | golgi, plasma membrane, vacuole | 67.74 | 74.19 |
| HORVU6Hr1G067170.3 | Barley | endoplasmic reticulum, vacuole | 55.51 | 72.18 |
| HORVU6Hr1G067200.1 | Barley | plastid | 75.78 | 69.52 |
| VIT_14s0108g00430.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 50.93 | 50.64 |
| VIT_18s0001g14660.t01 | Wine grape | peroxisome, plasma membrane, vacuole | 49.56 | 50.49 |
| VIT_10s0003g02550.t01 | Wine grape | cytosol, nucleus, peroxisome | 20.43 | 46.61 |
| VIT_08s0007g05060.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 48.59 | 44.61 |
| VIT_14s0066g02320.t01 | Wine grape | peroxisome | 41.35 | 44.43 |
| VIT_10s0003g02540.t01 | Wine grape | plasma membrane | 43.93 | 44.35 |
| VIT_10s0003g02570.t01 | Wine grape | plasma membrane | 43.44 | 43.58 |
| VIT_07s0005g02660.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 44.81 | 42.95 |
| VIT_05s0020g00890.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 44.17 | 42.43 |
| VIT_17s0000g09760.t01 | Wine grape | plasma membrane | 40.79 | 42.36 |
| VIT_10s0003g02580.t01 | Wine grape | plasma membrane | 42.64 | 41.9 |
| VIT_11s0016g03160.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 40.63 | 41.22 |
| VIT_01s0137g00350.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 41.51 | 41.21 |
| VIT_19s0085g00060.t01 | Wine grape | endoplasmic reticulum, plasma membrane, plastid | 40.47 | 41.06 |
| GSMUA_Achr4P17010_001 | Banana | peroxisome | 36.44 | 41.0 |
| VIT_16s0098g00570.t01 | Wine grape | cytosol, plasma membrane, vacuole | 37.89 | 39.65 |
| VIT_13s0019g00310.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 39.98 | 38.23 |
| VIT_06s0004g04100.t01 | Wine grape | cytosol | 40.79 | 36.09 |
| VIT_09s0002g00750.t01 | Wine grape | peroxisome, plastid | 40.31 | 31.77 |
Protein Annotations
| EntrezGene:100248951 | wikigene:100248951 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom |
| InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | ProteinID:CBI33860 | ProteinID:CBI33860.3 | UniProt:D7TTU5 |
| EMBL:FN596247 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 | InterPro:IPR011527 |
| InterPro:IPR036640 | EntrezGene:LOC100248951 | wikigene:LOC100248951 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 |
| ScanProsite:PS00211 | PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF415 | SMART:SM00382 |
| SUPFAM:SSF52540 | SUPFAM:SSF90123 | TMHMM:TMhelix | UniParc:UPI0001982BDF | ArrayExpress:VIT_02s0012g01660 | EnsemblPlantsGene:VIT_02s0012g01660 |
| EnsemblPlants:VIT_02s0012g01660.t01 | unigene:Vvi.1243 | RefSeq:XP_002277547 | RefSeq:XP_002277547.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr2:-:7963945..7972385
Molecular Weight (calculated)
136299.0 Da
IEP (calculated)
8.605
GRAVY (calculated)
0.170
Length
1243 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDGPNPFSGQ KKEGEEGKKP RRVPLLKLFA FADLYDCFLM AVGSVGACIH GASVPVFFIF FGKLIDIIGL AYLFPAAASH KVAKYSLDFV YLSLVILFSS
0101: WAEVACWMHT GERQAAKMRM AYVRSMLNQD ISLFDTEATT GEVISAITSD IIVVQDALSE KVGNFMHYIS RFIAGFAIGF IRVWQISLVT LAIVPLIAIA
0201: GGVYAYIATG LIARVRKSYV KAGEIAEEVI GNVRTVQAFA GEEKAVKLYK TALSNTYIYG RKAGLAKGLG LGSMHCVLFL SWALLVWFTS VVVHKNIANG
0301: GESFTTMLNV VIAGLSLGQA APDISAFIRA KASAYPIFEM IERNTISNTN SKTGRQLHKL EGHIQFRDIS FSYPSRPDIL IFNKLCFDIP SGKIVALVGG
0401: SGSGKSTVIS LIERFYEPLA GEILLDGNDI RQLDLQWLRQ QIGLVNQEPA LFATSIRENI LYGKDDATLD EITRAAKLSE AISFINNLPD RYETQVGERG
0501: IQLSGGQKQR IAIARAIVKN PSILLLDEAT SALDAESEKS VQEALDRVMV GRTTVVVAHR LSTIRNADMI AVVQHGKIVE TGSHEELISN PSSAYASLVQ
0601: LQETASLKRH PSQGPTMGRP LSMKCSRELS RTTTSFGASF HSDRESVGRI GAEGVEPVKS KQVSARRLYS MVGPDWYYGL VGTICALIAG AQMPLFALGV
0701: TEALVSYYMD WDTTRHQVKK IAFLFCGGAF ITVIVHAIEH TCFGIMGERL TLRIREMLFS AILGNEIGWF DDANNTSSML SSRLESDATL FRTIIVDRST
0801: ILIQNLGLVV TSFIIAFILN WRITLVVLAT YPLIISGHIS EKLFMQGYGG NLSKAYLKAN MIAGEAVSNM RTVAAFCSEE KVLDLYSREL VEPANKSFTR
0901: GQIAGLFYGI SQFFIFSSYG LALWYGSILM GKELASFKSV MKSFMVLIVT ALAMGETLAL APDLLKGNQM VASVFELMDR KTEVMGDAGE ELTRVEGTID
1001: LKGIEFRYPS RPDVVIFKDF DLRVRAGKSM ALVGQSGSGK SSVLSLILRF YDPIAGKVMI DGKDIKKLKL KSLRKHIGLV QQEPALFATS IFENILYGKE
1101: GASEAEVMEA AKLANAHSFI CGLPEGYSTK VGERGVQLSG GQKQRVAIAR AVLKNPEILL LDEATSALDV ESERVVQQAL DRLMVNRTTV LVAHRLSTIK
1201: NADQISVIQD GKIIEQGTHS TLVENREGAY FKLINLQQQQ QQQ
0101: WAEVACWMHT GERQAAKMRM AYVRSMLNQD ISLFDTEATT GEVISAITSD IIVVQDALSE KVGNFMHYIS RFIAGFAIGF IRVWQISLVT LAIVPLIAIA
0201: GGVYAYIATG LIARVRKSYV KAGEIAEEVI GNVRTVQAFA GEEKAVKLYK TALSNTYIYG RKAGLAKGLG LGSMHCVLFL SWALLVWFTS VVVHKNIANG
0301: GESFTTMLNV VIAGLSLGQA APDISAFIRA KASAYPIFEM IERNTISNTN SKTGRQLHKL EGHIQFRDIS FSYPSRPDIL IFNKLCFDIP SGKIVALVGG
0401: SGSGKSTVIS LIERFYEPLA GEILLDGNDI RQLDLQWLRQ QIGLVNQEPA LFATSIRENI LYGKDDATLD EITRAAKLSE AISFINNLPD RYETQVGERG
0501: IQLSGGQKQR IAIARAIVKN PSILLLDEAT SALDAESEKS VQEALDRVMV GRTTVVVAHR LSTIRNADMI AVVQHGKIVE TGSHEELISN PSSAYASLVQ
0601: LQETASLKRH PSQGPTMGRP LSMKCSRELS RTTTSFGASF HSDRESVGRI GAEGVEPVKS KQVSARRLYS MVGPDWYYGL VGTICALIAG AQMPLFALGV
0701: TEALVSYYMD WDTTRHQVKK IAFLFCGGAF ITVIVHAIEH TCFGIMGERL TLRIREMLFS AILGNEIGWF DDANNTSSML SSRLESDATL FRTIIVDRST
0801: ILIQNLGLVV TSFIIAFILN WRITLVVLAT YPLIISGHIS EKLFMQGYGG NLSKAYLKAN MIAGEAVSNM RTVAAFCSEE KVLDLYSREL VEPANKSFTR
0901: GQIAGLFYGI SQFFIFSSYG LALWYGSILM GKELASFKSV MKSFMVLIVT ALAMGETLAL APDLLKGNQM VASVFELMDR KTEVMGDAGE ELTRVEGTID
1001: LKGIEFRYPS RPDVVIFKDF DLRVRAGKSM ALVGQSGSGK SSVLSLILRF YDPIAGKVMI DGKDIKKLKL KSLRKHIGLV QQEPALFATS IFENILYGKE
1101: GASEAEVMEA AKLANAHSFI CGLPEGYSTK VGERGVQLSG GQKQRVAIAR AVLKNPEILL LDEATSALDV ESERVVQQAL DRLMVNRTTV LVAHRLSTIK
1201: NADQISVIQD GKIIEQGTHS TLVENREGAY FKLINLQQQQ QQQ
0001: MYISLIFFLS NHFPPLISIP IFIFLSFSSP TNYTHLKLKK MQPSGDPAPE KEKEMTQPKV SLLKLFSFAD FYDCVLMTLG SVGACIHGAS VPIFFIFFGK
0101: LINIIGLAYL FPKQASHRVA KYSLDFVYLS VAILFSSWLE VACWMHTGER QAAKMRRAYL RSMLSQDISL FDTEASTGEV ISAITSDILV VQDALSEKVG
0201: NFLHYISRFI AGFAIGFTSV WQISLVTLSI VPLIALAGGI YAFVAIGLIA RVRKSYIKAG EIAEEVIGNV RTVQAFTGEE RAVRLYREAL ENTYKYGRKA
0301: GLTKGLGLGS MHCVLFLSWA LLVWFTSVVV HKDIADGGKS FTTMLNVVIA GLSLGQAAPD ISAFVRAKAA AYPIFKMIER NTVTKTSAKS GRKLGKVDGH
0401: IQFKDATFSY PSRPDVVIFD RLNLAIPAGK IVALVGGSGS GKSTVISLIE RFYEPISGAV LLDGNNISEL DIKWLRGQIG LVNQEPALFA TTIRENILYG
0501: KDDATAEEIT RAAKLSEAIS FINNLPEGFE TQVGERGIQL SGGQKQRIAI SRAIVKNPSI LLLDEATSAL DAESEKSVQE ALDRVMVGRT TVVVAHRLST
0601: VRNADIIAVV HEGKIVEFGN HENLISNPDG AYSSLLRLQE TASLQRNPSL NRTLSRPHSI KYSRELSRTR SSFCSERESV TRPDGADPSK KVKVTVGRLY
0701: SMIRPDWMYG VCGTICAFIA GSQMPLFALG VSQALVSYYS GWDETQKEIK KIAILFCCAS VITLIVYTIE HICFGTMGER LTLRVRENMF RAILKNEIGW
0801: FDEVDNTSSM LASRLESDAT LLKTIVVDRS TILLQNLGLV VTSFIIAFIL NWRLTLVVLA TYPLVISGHI SEKLFMQGYG GDLNKAYLKA NMLAGESVSN
0901: IRTVAAFCAE EKILELYSRE LLEPSKSSFR RGQIAGLFYG VSQFFIFSSY GLALWYGSTL MDKGLAGFKS VMKTFMVLIV TALAMGETLA LAPDLLKGNQ
1001: MVASVFEILD RKTQIVGETS EELNNVEGTI ELKGVHFSYP SRPDVVIFRD FDLIVRAGKS MALVGQSGSG KSSVISLILR FYDPTAGKVM IEGKDIKKLD
1101: LKALRKHIGL VQQEPALFAT TIYENILYGN EGASQSEVVE SAMLANAHSF ITSLPEGYST KVGERGVQMS GGQRQRIAIA RAILKNPAIL LLDEATSALD
1201: VESERVVQQA LDRLMANRTT VVVAHRLSTI KNADTISVLH GGKIVEQGSH RKLVLNKSGP YFKLISLQQQ QQP
0101: LINIIGLAYL FPKQASHRVA KYSLDFVYLS VAILFSSWLE VACWMHTGER QAAKMRRAYL RSMLSQDISL FDTEASTGEV ISAITSDILV VQDALSEKVG
0201: NFLHYISRFI AGFAIGFTSV WQISLVTLSI VPLIALAGGI YAFVAIGLIA RVRKSYIKAG EIAEEVIGNV RTVQAFTGEE RAVRLYREAL ENTYKYGRKA
0301: GLTKGLGLGS MHCVLFLSWA LLVWFTSVVV HKDIADGGKS FTTMLNVVIA GLSLGQAAPD ISAFVRAKAA AYPIFKMIER NTVTKTSAKS GRKLGKVDGH
0401: IQFKDATFSY PSRPDVVIFD RLNLAIPAGK IVALVGGSGS GKSTVISLIE RFYEPISGAV LLDGNNISEL DIKWLRGQIG LVNQEPALFA TTIRENILYG
0501: KDDATAEEIT RAAKLSEAIS FINNLPEGFE TQVGERGIQL SGGQKQRIAI SRAIVKNPSI LLLDEATSAL DAESEKSVQE ALDRVMVGRT TVVVAHRLST
0601: VRNADIIAVV HEGKIVEFGN HENLISNPDG AYSSLLRLQE TASLQRNPSL NRTLSRPHSI KYSRELSRTR SSFCSERESV TRPDGADPSK KVKVTVGRLY
0701: SMIRPDWMYG VCGTICAFIA GSQMPLFALG VSQALVSYYS GWDETQKEIK KIAILFCCAS VITLIVYTIE HICFGTMGER LTLRVRENMF RAILKNEIGW
0801: FDEVDNTSSM LASRLESDAT LLKTIVVDRS TILLQNLGLV VTSFIIAFIL NWRLTLVVLA TYPLVISGHI SEKLFMQGYG GDLNKAYLKA NMLAGESVSN
0901: IRTVAAFCAE EKILELYSRE LLEPSKSSFR RGQIAGLFYG VSQFFIFSSY GLALWYGSTL MDKGLAGFKS VMKTFMVLIV TALAMGETLA LAPDLLKGNQ
1001: MVASVFEILD RKTQIVGETS EELNNVEGTI ELKGVHFSYP SRPDVVIFRD FDLIVRAGKS MALVGQSGSG KSSVISLILR FYDPTAGKVM IEGKDIKKLD
1101: LKALRKHIGL VQQEPALFAT TIYENILYGN EGASQSEVVE SAMLANAHSF ITSLPEGYST KVGERGVQMS GGQRQRIAIA RAILKNPAIL LLDEATSALD
1201: VESERVVQQA LDRLMANRTT VVVAHRLSTI KNADTISVLH GGKIVEQGSH RKLVLNKSGP YFKLISLQQQ QQP
Arabidopsis Description
ABCB2ABC transporter B family member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPK2]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.