Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g013890.1.1 | Tomato | cytosol, plasma membrane | 54.23 | 71.17 |
| PGSC0003DMT400027962 | Potato | golgi, plasma membrane, vacuole | 69.65 | 69.54 |
| PGSC0003DMT400013988 | Potato | plasma membrane | 65.02 | 66.39 |
| Solyc07g018130.1.1 | Tomato | plasma membrane | 66.45 | 65.25 |
| VIT_14s0066g02320.t01 | Wine grape | peroxisome | 53.04 | 57.39 |
| Os04t0481700-01 | Rice | plasma membrane | 30.27 | 56.57 |
| VIT_17s0000g09760.t01 | Wine grape | plasma membrane | 53.99 | 56.47 |
| TraesCS2D01G339000.1 | Wheat | plasma membrane | 55.51 | 55.03 |
| TraesCS2B01G358200.1 | Wheat | plasma membrane | 55.51 | 54.94 |
| TraesCS2A01G323900.1 | Wheat | plasma membrane | 55.27 | 54.66 |
| VIT_19s0085g00060.t01 | Wine grape | endoplasmic reticulum, plasma membrane, plastid | 52.72 | 53.88 |
| VIT_11s0016g03160.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 48.72 | 49.8 |
| VIT_14s0108g00430.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 44.01 | 44.08 |
| VIT_18s0001g14660.t01 | Wine grape | peroxisome, plasma membrane, vacuole | 42.81 | 43.93 |
| VIT_02s0012g01660.t01 | Wine grape | plasma membrane | 41.21 | 41.51 |
| VIT_08s0007g05060.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 44.57 | 41.21 |
| VIT_10s0003g02550.t01 | Wine grape | cytosol, nucleus, peroxisome | 17.73 | 40.73 |
| VIT_10s0003g02540.t01 | Wine grape | plasma membrane | 39.94 | 40.62 |
| VIT_07s0005g02660.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 42.01 | 40.56 |
| VIT_10s0003g02570.t01 | Wine grape | plasma membrane | 39.7 | 40.11 |
| VIT_05s0020g00890.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 40.66 | 39.34 |
| VIT_10s0003g02580.t01 | Wine grape | plasma membrane | 39.38 | 38.97 |
| VIT_16s0098g00570.t01 | Wine grape | cytosol, plasma membrane, vacuole | 35.22 | 37.12 |
| VIT_13s0019g00310.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 35.06 | 33.77 |
| VIT_06s0004g04100.t01 | Wine grape | cytosol | 35.46 | 31.6 |
| VIT_09s0002g00750.t01 | Wine grape | peroxisome, plastid | 39.7 | 31.52 |
Protein Annotations
| Gene3D:1.20.1560.10 | EntrezGene:100254183 | wikigene:100254183 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase |
| InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | EMBL:AM460636 | ProteinID:CAN81180 |
| ProteinID:CAN81180.1 | ProteinID:CCB44009 | ProteinID:CCB44009.1 | UniProt:F6GVP6 | EMBL:FN594954 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 |
| GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 | InterPro:IPR011527 | InterPro:IPR036640 | EntrezGene:LOC100254183 |
| wikigene:LOC100254183 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 | PFscan:PS50893 |
| PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF212 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 |
| TMHMM:TMhelix | UniParc:UPI0002108353 | ArrayExpress:VIT_01s0137g00350 | EnsemblPlantsGene:VIT_01s0137g00350 | EnsemblPlants:VIT_01s0137g00350.t01 | RefSeq:XP_002282137 |
| RefSeq:XP_002282137.2 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr1:+:6879075..6883938
Molecular Weight (calculated)
137565.0 Da
IEP (calculated)
9.631
GRAVY (calculated)
0.095
Length
1252 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGRKGGMFRY ANGIDMLLML LGTLGSIGDG LMSPLTMLVL SDVINKYGDV DPSFSIQVVD KVRLDYCLLF TALTLAVLCC YWKGICWTRT SERQTSRMRM
0101: EYLKSVLRQE VGFFDKQAAS STTFQVISTI SSDAHSIQDV ISEKIPNCLA HLSSFIFCLI VAFFLSWRLA VAALPFSLMF IIPGVGFGKL MMNLGMKMKV
0201: AYGVAGEIAE QAISSVRTVY SYAGECQTLD RFSHALQKSM KLGIKLGFTK GLLIGSMGTI YAAWAFQAWV GTILVTEKGE GGGSVFISGV CNSQSQSRNF
0301: RSIMNALPNL SFILEATAAA TRIFEITDRI PEIDSENEKG KILAYVRGEI EFKEVEFSYP SRPTTKILQG FNLKVKAGKT VGLVGGSGSG KSTIISLLER
0401: FYDPVKGNIL LDGHKIKRLQ LKWLRSQIGL VNQEPVLFAT SIKENILFGK EGAPLELVVR AAKAANAHGF ISKLPQGYET QVGQFGIQLS GGQKQRIAIA
0501: RALIRDPRIL LLDEATSALD AESERIVQEA LDQASLGRTT IMIAHRLSTI HKADIIVVLQ SGRVVESGSH NDLIQMNNGQ GGAYSRMLQL QQSAMQSNSS
0601: FYRPADGTSH SRTMSAQTPV SVTSSLPSSP AFLFSPAFSI SMAPSIQLHS YDESDSENLE KSSYPPWQWR LVKMNLPEWK RGLIGCIGAA VFGAIQPTHA
0701: YCLGTVVSVY FLKDDSSIKS QTKFYCFIFL GLAVLSFIAN LLQHYNFAIM GERLIKRVRE KMLGKVLTFE IGWFDQDENT SAAICARLAT EANMVRSLIG
0801: DRISLLVQVF FSASLAFMVG LIVTWRLAIV MIAMQPLLIG SFYSKSVLMK SMSEKALKAQ NEGSQLASEA AVNHRTITAF SSQQRILGLF GATMEGPKKE
0901: NIKQSWISGF GLFSSQFLTT ASIALTYWYG GRLMIHGLIT PKHLFQAFFI LMSTGKNIAD AGSMTSDLAK GSRAMRSVFA ILDRQSKIEP EDPERIMVNK
1001: AIKGCIELKN VFFSYPTRPD QMIFKGLSLR IEAGKTAALV GESGSGKSTV IGLIERFYDP LNGSVQIDQH DIRSYNLRKL RSHIALVSQE PILFAGTIYE
1101: NIVYGKENAT EAEIRRAALL ANAHEFISSM KDGYKTYCGE RGVQLSGGQK QRIALARAIL KNPAIILLDE ATSALDSMSE NLVQEALEKM MVGRTCVVVA
1201: HRLSTIQKSD TIAVIKNGKV VEQGSHSDLL AVGHGGTYYS LIKLQGNHSP YR
0101: EYLKSVLRQE VGFFDKQAAS STTFQVISTI SSDAHSIQDV ISEKIPNCLA HLSSFIFCLI VAFFLSWRLA VAALPFSLMF IIPGVGFGKL MMNLGMKMKV
0201: AYGVAGEIAE QAISSVRTVY SYAGECQTLD RFSHALQKSM KLGIKLGFTK GLLIGSMGTI YAAWAFQAWV GTILVTEKGE GGGSVFISGV CNSQSQSRNF
0301: RSIMNALPNL SFILEATAAA TRIFEITDRI PEIDSENEKG KILAYVRGEI EFKEVEFSYP SRPTTKILQG FNLKVKAGKT VGLVGGSGSG KSTIISLLER
0401: FYDPVKGNIL LDGHKIKRLQ LKWLRSQIGL VNQEPVLFAT SIKENILFGK EGAPLELVVR AAKAANAHGF ISKLPQGYET QVGQFGIQLS GGQKQRIAIA
0501: RALIRDPRIL LLDEATSALD AESERIVQEA LDQASLGRTT IMIAHRLSTI HKADIIVVLQ SGRVVESGSH NDLIQMNNGQ GGAYSRMLQL QQSAMQSNSS
0601: FYRPADGTSH SRTMSAQTPV SVTSSLPSSP AFLFSPAFSI SMAPSIQLHS YDESDSENLE KSSYPPWQWR LVKMNLPEWK RGLIGCIGAA VFGAIQPTHA
0701: YCLGTVVSVY FLKDDSSIKS QTKFYCFIFL GLAVLSFIAN LLQHYNFAIM GERLIKRVRE KMLGKVLTFE IGWFDQDENT SAAICARLAT EANMVRSLIG
0801: DRISLLVQVF FSASLAFMVG LIVTWRLAIV MIAMQPLLIG SFYSKSVLMK SMSEKALKAQ NEGSQLASEA AVNHRTITAF SSQQRILGLF GATMEGPKKE
0901: NIKQSWISGF GLFSSQFLTT ASIALTYWYG GRLMIHGLIT PKHLFQAFFI LMSTGKNIAD AGSMTSDLAK GSRAMRSVFA ILDRQSKIEP EDPERIMVNK
1001: AIKGCIELKN VFFSYPTRPD QMIFKGLSLR IEAGKTAALV GESGSGKSTV IGLIERFYDP LNGSVQIDQH DIRSYNLRKL RSHIALVSQE PILFAGTIYE
1101: NIVYGKENAT EAEIRRAALL ANAHEFISSM KDGYKTYCGE RGVQLSGGQK QRIALARAIL KNPAIILLDE ATSALDSMSE NLVQEALEKM MVGRTCVVVA
1201: HRLSTIQKSD TIAVIKNGKV VEQGSHSDLL AVGHGGTYYS LIKLQGNHSP YR
0001: MGKEEEKESG RNKMNCFGSV RSIFMHADGV DWLLMGLGLI GAVGDGFTTP LVLLITSKLM NNIGGSSFNT DTFMQSISKN SVALLYVACG SWVVCFLEGY
0101: CWTRTGERQT ARMREKYLRA VLRQDVGYFD LHVTSTSDVI TSVSSDSFVI QDVLSEKLPN FLMSASTFVG SYIVGFILLW RLAIVGLPFI VLLVIPGLMY
0201: GRALISISRK IREEYNEAGF VAEQAISSVR TVYAFSGERK TISKFSTALQ GSVKLGIKQG LAKGITIGSN GITFAMWGFM SWYGSRMVMY HGAQGGTVFA
0301: VAAAIAIGGV SLGGGLSNLK YFFEAASVGE RIMEVINRVP KIDSDNPDGH KLEKIRGEVE FKNVKFVYPS RLETSIFDDF CLRVPSGKTV ALVGGSGSGK
0401: STVISLLQRF YDPLAGEILI DGVSIDKLQV KWLRSQMGLV SQEPALFATT IKENILFGKE DASMDDVVEA AKASNAHNFI SQLPNGYETQ VGERGVQMSG
0501: GQKQRIAIAR AIIKSPTILL LDEATSALDS ESERVVQEAL ENASIGRTTI LIAHRLSTIR NADVISVVKN GHIVETGSHD ELMENIDGQY STLVHLQQIE
0601: KQDINVSVKI GPISDPSKDI RNSSRVSTLS RSSSANSVTG PSTIKNLSED NKPQLPSFKR LLAMNLPEWK QALYGCISAT LFGAIQPAYA YSLGSMVSVY
0701: FLTSHDEIKE KTRIYALSFV GLAVLSFLIN ISQHYNFAYM GEYLTKRIRE RMLSKVLTFE VGWFDRDENS SGAICSRLAK DANVVRSLVG DRMALVVQTV
0801: SAVTIAFTMG LVIAWRLALV MIAVQPVIIV CFYTRRVLLK SMSKKAIKAQ DESSKLAAEA VSNVRTITAF SSQERIMKML EKAQESPRRE SIRQSWFAGF
0901: GLAMSQSLTS CTWALDFWYG GRLIQDGYIT AKALFETFMI LVSTGRVIAD AGSMTTDLAK GSDAVGSVFA VLDRYTSIDP EDPDGYETER ITGQVEFLDV
1001: DFSYPTRPDV IIFKNFSIKI EEGKSTAIVG PSGSGKSTII GLIERFYDPL KGIVKIDGRD IRSYHLRSLR RHIALVSQEP TLFAGTIREN IIYGGVSDKI
1101: DEAEIIEAAK AANAHDFITS LTEGYDTYCG DRGVQLSGGQ KQRIAIARAV LKNPSVLLLD EATSALDSQS ERVVQDALER VMVGRTSVVI AHRLSTIQNC
1201: DAIAVLDKGK LVERGTHSSL LSKGPTGIYF SLVSLQTTSG
0101: CWTRTGERQT ARMREKYLRA VLRQDVGYFD LHVTSTSDVI TSVSSDSFVI QDVLSEKLPN FLMSASTFVG SYIVGFILLW RLAIVGLPFI VLLVIPGLMY
0201: GRALISISRK IREEYNEAGF VAEQAISSVR TVYAFSGERK TISKFSTALQ GSVKLGIKQG LAKGITIGSN GITFAMWGFM SWYGSRMVMY HGAQGGTVFA
0301: VAAAIAIGGV SLGGGLSNLK YFFEAASVGE RIMEVINRVP KIDSDNPDGH KLEKIRGEVE FKNVKFVYPS RLETSIFDDF CLRVPSGKTV ALVGGSGSGK
0401: STVISLLQRF YDPLAGEILI DGVSIDKLQV KWLRSQMGLV SQEPALFATT IKENILFGKE DASMDDVVEA AKASNAHNFI SQLPNGYETQ VGERGVQMSG
0501: GQKQRIAIAR AIIKSPTILL LDEATSALDS ESERVVQEAL ENASIGRTTI LIAHRLSTIR NADVISVVKN GHIVETGSHD ELMENIDGQY STLVHLQQIE
0601: KQDINVSVKI GPISDPSKDI RNSSRVSTLS RSSSANSVTG PSTIKNLSED NKPQLPSFKR LLAMNLPEWK QALYGCISAT LFGAIQPAYA YSLGSMVSVY
0701: FLTSHDEIKE KTRIYALSFV GLAVLSFLIN ISQHYNFAYM GEYLTKRIRE RMLSKVLTFE VGWFDRDENS SGAICSRLAK DANVVRSLVG DRMALVVQTV
0801: SAVTIAFTMG LVIAWRLALV MIAVQPVIIV CFYTRRVLLK SMSKKAIKAQ DESSKLAAEA VSNVRTITAF SSQERIMKML EKAQESPRRE SIRQSWFAGF
0901: GLAMSQSLTS CTWALDFWYG GRLIQDGYIT AKALFETFMI LVSTGRVIAD AGSMTTDLAK GSDAVGSVFA VLDRYTSIDP EDPDGYETER ITGQVEFLDV
1001: DFSYPTRPDV IIFKNFSIKI EEGKSTAIVG PSGSGKSTII GLIERFYDPL KGIVKIDGRD IRSYHLRSLR RHIALVSQEP TLFAGTIREN IIYGGVSDKI
1101: DEAEIIEAAK AANAHDFITS LTEGYDTYCG DRGVQLSGGQ KQRIAIARAV LKNPSVLLLD EATSALDSQS ERVVQDALER VMVGRTSVVI AHRLSTIQNC
1201: DAIAVLDKGK LVERGTHSSL LSKGPTGIYF SLVSLQTTSG
Arabidopsis Description
ABCB15ABC transporter B family member 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHD1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.