Factsheet for Os04t0481700-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
plasma membrane 2
mitochondrion 2
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0290700-01	Rice	cytosol, plasma membrane	13.13	59.46
Os01t0695800-01	Rice	plasma membrane	20.9	53.44
Os05t0137200-01	Rice	plasma membrane	27.01	46.06
Os02t0189800-00	Rice	mitochondrion	47.61	42.65
TraesCS2B01G358200.1	Wheat	plasma membrane	77.76	41.19
TraesCS2D01G339000.1	Wheat	plasma membrane	77.46	41.09
TraesCS2A01G323900.1	Wheat	plasma membrane	77.46	41.0
Os05t0548300-01	Rice	plasma membrane	34.78	40.03
Solyc05g013890.1.1	Tomato	cytosol, plasma membrane	53.58	37.63
VIT_01s0137g00350.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	56.57	30.27
PGSC0003DMT400027962	Potato	golgi, plasma membrane, vacuole	53.28	28.47
Os02t0190300-01	Rice	plasma membrane	50.6	27.23
PGSC0003DMT400049576	Potato	plasma membrane	50.6	26.93
Solyc07g064120.1.1	Tomato	plasma membrane	50.15	26.69
VIT_17s0000g09760.t01	Wine grape	plasma membrane	47.61	26.65
Os02t0190000-00	Rice	plasma membrane	48.96	26.39
Solyc07g018130.1.1	Tomato	plasma membrane	50.0	26.27
PGSC0003DMT400013988	Potato	plasma membrane	47.46	25.94
Os03t0181750-00	Rice	plasma membrane	34.18	23.73
Os01t0534700-00	Rice	plasma membrane	34.48	20.89
Os04t0459000-01	Rice	plasma membrane	38.96	20.73
Os02t0693700-02	Rice	plasma membrane	37.61	19.94
Os08t0564300-04	Rice	plasma membrane	38.81	19.35
Os05t0548500-00	Rice	plasma membrane	35.37	18.81
Os01t0695700-00	Rice	plasma membrane	34.33	18.15
Os03t0280000-01	Rice	plasma membrane	34.78	16.51
Os02t0323000-01	Rice	cytosol, peroxisome	10.0	15.84
Os01t0975900-02	Rice	plasma membrane	5.82	15.48
Os01t0533900-01	Rice	endoplasmic reticulum, vacuole	10.3	8.26
Os01t0976000-01	Rice	nucleus	1.79	2.12
Os03t0181675-00	Rice	cytosol, nucleus, peroxisome, plastid	0.15	0.17
Os04t0642000-01	Rice	cytosol, peroxisome, plasma membrane	0.0	0.0

Protein Annotations

Gene3D:1.20.1560.10	MapMan:24.1.3.1.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	ProteinID:BAF15027.1	ProteinID:BAS89750.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626
GO:GO:0055085	InterPro:IPR003439	InterPro:IPR011527	InterPro:IPR036640	EnsemblPlantsGene:Os04g0481700	EnsemblPlants:Os04t0481700-01
InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664	ScanProsite:PS00211	PFscan:PS50893	PFscan:PS50929
PANTHER:PTHR24221	PANTHER:PTHR24221:SF212	UniProt:Q0JCB0	SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF90123
TMHMM:TMhelix	UniParc:UPI0000DD9136	SEG:seg	:	:	:

Description

MULTIDRUG RESISTANCE 1Similar to MDR-like ABC transporter. (Os04t0481700-01)

Coordinates

chr4:+:24096146..24098246

Molecular Weight (calculated)

73283.8 Da

IEP (calculated)

9.806

GRAVY (calculated)

-0.032

Length

670 amino acids

Sequence
(BLAST)

001: MVHLQKAPPV AAREERHRAV DVVESEMVSF RSVEIMSAVS ATEHRPSPAP SFCSVEHSTE IGRKLVDHGV ARSRKPSKLR LLKMNRPEWK QALLGCVGAV
101: VFGAVLPLYS YSLGSLPEVY FLADDGQIRS KTRLYYFLFL GIAVVCITAN IVQHYNFAVM GERLTERVRG QMLAKILSFE VGWFDEDENS SAAVCARLAT
201: QSSKVRSLVG DRMCLLVQAG ATASLGFSLA LAVSWRLATV MMAMQPLIIA SFYFKKVLMA AMSKKAKKAQ VQGSQLASEA VVNHRTITAF SSQRRMLRLY
301: EAAQQGPKKD NVAHSWFSGF CLCLCQFSNT GSMAVALWYG GKLMAKGLIT PTHLFQVFFM LMTMGRVIAD AGSLTSDLAQ GGDAVRSVLD TLDREPTIKD
401: DDNDNERKKK KRKEIKGAIE FKNVHFSYPT RPEVAVLAGF SLEIGAGKTV ALVGPSGSGK STVIGLIERF YDAQRGSVLV DGEDIRSYSL ARLRSQVALV
501: SQEPTLFSGT IRDNIAYGAA EEHATEDEVA RAAALANAHG FISAMERGYD TRVGERGAQL SGGQRQRIAL ARAVLKDARI LLLDEATSAL DAASERLVQD
601: AVDRMLRGRT CVVVAHRLST VEKSDTIAVV KDGRVAERGR HHELLAVGRA GTYYNLIKLQ HGRSPCLSPM

Best Arabidopsis Sequence Match ( AT3G28345.1 )
(BLAST)

0001: MGKEEEKESG RNKMNCFGSV RSIFMHADGV DWLLMGLGLI GAVGDGFTTP LVLLITSKLM NNIGGSSFNT DTFMQSISKN SVALLYVACG SWVVCFLEGY
0101: CWTRTGERQT ARMREKYLRA VLRQDVGYFD LHVTSTSDVI TSVSSDSFVI QDVLSEKLPN FLMSASTFVG SYIVGFILLW RLAIVGLPFI VLLVIPGLMY
0201: GRALISISRK IREEYNEAGF VAEQAISSVR TVYAFSGERK TISKFSTALQ GSVKLGIKQG LAKGITIGSN GITFAMWGFM SWYGSRMVMY HGAQGGTVFA
0301: VAAAIAIGGV SLGGGLSNLK YFFEAASVGE RIMEVINRVP KIDSDNPDGH KLEKIRGEVE FKNVKFVYPS RLETSIFDDF CLRVPSGKTV ALVGGSGSGK
0401: STVISLLQRF YDPLAGEILI DGVSIDKLQV KWLRSQMGLV SQEPALFATT IKENILFGKE DASMDDVVEA AKASNAHNFI SQLPNGYETQ VGERGVQMSG
0501: GQKQRIAIAR AIIKSPTILL LDEATSALDS ESERVVQEAL ENASIGRTTI LIAHRLSTIR NADVISVVKN GHIVETGSHD ELMENIDGQY STLVHLQQIE
0601: KQDINVSVKI GPISDPSKDI RNSSRVSTLS RSSSANSVTG PSTIKNLSED NKPQLPSFKR LLAMNLPEWK QALYGCISAT LFGAIQPAYA YSLGSMVSVY
0701: FLTSHDEIKE KTRIYALSFV GLAVLSFLIN ISQHYNFAYM GEYLTKRIRE RMLSKVLTFE VGWFDRDENS SGAICSRLAK DANVVRSLVG DRMALVVQTV
0801: SAVTIAFTMG LVIAWRLALV MIAVQPVIIV CFYTRRVLLK SMSKKAIKAQ DESSKLAAEA VSNVRTITAF SSQERIMKML EKAQESPRRE SIRQSWFAGF
0901: GLAMSQSLTS CTWALDFWYG GRLIQDGYIT AKALFETFMI LVSTGRVIAD AGSMTTDLAK GSDAVGSVFA VLDRYTSIDP EDPDGYETER ITGQVEFLDV
1001: DFSYPTRPDV IIFKNFSIKI EEGKSTAIVG PSGSGKSTII GLIERFYDPL KGIVKIDGRD IRSYHLRSLR RHIALVSQEP TLFAGTIREN IIYGGVSDKI
1101: DEAEIIEAAK AANAHDFITS LTEGYDTYCG DRGVQLSGGQ KQRIAIARAV LKNPSVLLLD EATSALDSQS ERVVQDALER VMVGRTSVVI AHRLSTIQNC
1201: DAIAVLDKGK LVERGTHSSL LSKGPTGIYF SLVSLQTTSG

Arabidopsis Description

ABCB15ABC transporter B family member 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHD1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.