Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- plasma membrane 1
- mitochondrion 1
- plastid 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G296900.1 | Wheat | peroxisome | 69.98 | 27.2 |
| TraesCS4A01G006900.1 | Wheat | peroxisome | 69.64 | 27.16 |
| KXG25805 | Sorghum | peroxisome, plastid | 71.18 | 26.81 |
| Zm00001d004442_P001 | Maize | plastid | 69.64 | 26.76 |
| HORVU4Hr1G077060.1 | Barley | mitochondrion, peroxisome, plastid | 62.26 | 26.1 |
| TraesCS4B01G298100.1 | Wheat | mitochondrion, plasma membrane | 51.46 | 22.83 |
| Os04t0642000-01 | Rice | cytosol, peroxisome, plasma membrane | 19.9 | 18.95 |
| KRH06234 | Soybean | peroxisome, plastid | 45.63 | 17.56 |
| PGSC0003DMT400058977 | Potato | plastid | 44.77 | 17.09 |
| VIT_09s0002g00750.t01 | Wine grape | peroxisome, plastid | 44.77 | 16.55 |
| Os01t0533900-01 | Rice | endoplasmic reticulum, vacuole | 13.72 | 9.58 |
| Os04t0459000-01 | Rice | plasma membrane | 20.24 | 9.37 |
| Os02t0190300-01 | Rice | plasma membrane | 18.87 | 8.84 |
| Os08t0564300-04 | Rice | plasma membrane | 19.04 | 8.26 |
| Os02t0693700-02 | Rice | plasma membrane | 17.84 | 8.23 |
| Os05t0548500-00 | Rice | plasma membrane | 17.67 | 8.17 |
| Os01t0695700-00 | Rice | plasma membrane | 17.5 | 8.05 |
| Os02t0190000-00 | Rice | plasma membrane | 17.15 | 8.05 |
| Os03t0280000-01 | Rice | plasma membrane | 17.15 | 7.09 |
| Os01t0975900-02 | Rice | plasma membrane | 2.06 | 4.76 |
| Os01t0534700-00 | Rice | plasma membrane | 7.72 | 4.07 |
| Os03t0181750-00 | Rice | plasma membrane | 1.37 | 0.83 |
| Os01t0976000-01 | Rice | nucleus | 0.34 | 0.35 |
| Os02t0189800-00 | Rice | mitochondrion | 0.34 | 0.27 |
| Os05t0548300-01 | Rice | plasma membrane | 0.17 | 0.17 |
| Os04t0481700-01 | Rice | plasma membrane | 0.17 | 0.15 |
| Os05t0137200-01 | Rice | plasma membrane | 0.0 | 0.0 |
| Os02t0323000-01 | Rice | cytosol, peroxisome | 0.0 | 0.0 |
| Os01t0290700-01 | Rice | cytosol, plasma membrane | 0.0 | 0.0 |
| Os01t0695800-01 | Rice | plasma membrane | 0.0 | 0.0 |
| Bra032855.1-P | Field mustard | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:35.1 | UniProt:A0A0P0VTS6 | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf | ProteinID:BAS82631.1 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 |
| GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR011527 | InterPro:IPR036640 | EnsemblPlantsGene:Os03g0181675 |
| EnsemblPlants:Os03t0181675-00 | PFAM:PF00664 | PFscan:PS50929 | PANTHER:PTHR24222 | PANTHER:PTHR24222:SF21 | SUPFAM:SSF90123 |
| TMHMM:TMhelix | UniParc:UPI00039388CD | SEG:seg | : | : | : |
Description
ABC TRANSPORTER B FAMILY MEMBER 12ABC transporter, transmembrane domain domain containing protein. (Os03t0181675-00)
Coordinates
chr3:+:4279300..4281410
Molecular Weight (calculated)
63179.0 Da
IEP (calculated)
8.998
GRAVY (calculated)
-0.119
Length
583 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDFSFSHSG PQGGGRHRRR GSPYSVPDSS TSFAAGLPPS PRGGPRRRDV VVDDMSWQSS VSWQPDTSWA QPHGLGAAVG PWAPARMGSA GRRGPALFRR
101: TAREYYVSRR SARPRYRDVS SSAHRPVAAA AGGGGGRRLE LQSVVTDASR AIVVVPNTSF ASNDDSVVVA DSAVYSAPGH DAGRGGRAMV RYSDTNAAAA
201: ASREVSFSRD NHDQLYVSAA RRDPPSFGYD ISVASFSGQS RYEDAVGDYD DDDDEIDVRV GKPVGVAGLF KYSTAMDIVL LVLGCVGAMI NGGSLPWYSY
301: LFGNFVNKIV NVDKTQMMKD VKQISVYMAF LAAVVVVGAY LEITCWRIIG ERSALRMRRE YLKAVLRQEI GFFDTEVSTG EVMHSISGDV AQIQEVMGEK
401: IPGFVHHVFT FVFGYVVGFA KSWRIALAVF AVTPAMMACG MAYKAIYGGL TAKEEASYQR AGDVAQQAIS SIRTVMSFVM EERLAGEYAE WLDKAAPIGV
501: KMGFAKGAGM GVIYLVTYSQ WALALWYGSR LVANGEIKGG DAIACFFGVM VGGRHAHQPP RTASCCRQWR RSPEFRGWCG GDL
101: TAREYYVSRR SARPRYRDVS SSAHRPVAAA AGGGGGRRLE LQSVVTDASR AIVVVPNTSF ASNDDSVVVA DSAVYSAPGH DAGRGGRAMV RYSDTNAAAA
201: ASREVSFSRD NHDQLYVSAA RRDPPSFGYD ISVASFSGQS RYEDAVGDYD DDDDEIDVRV GKPVGVAGLF KYSTAMDIVL LVLGCVGAMI NGGSLPWYSY
301: LFGNFVNKIV NVDKTQMMKD VKQISVYMAF LAAVVVVGAY LEITCWRIIG ERSALRMRRE YLKAVLRQEI GFFDTEVSTG EVMHSISGDV AQIQEVMGEK
401: IPGFVHHVFT FVFGYVVGFA KSWRIALAVF AVTPAMMACG MAYKAIYGGL TAKEEASYQR AGDVAQQAIS SIRTVMSFVM EERLAGEYAE WLDKAAPIGV
501: KMGFAKGAGM GVIYLVTYSQ WALALWYGSR LVANGEIKGG DAIACFFGVM VGGRHAHQPP RTASCCRQWR RSPEFRGWCG GDL
0001: MDNDGGAPPP PPTLVVEEPK KAEIRGVAFK ELFRFADGLD YVLMGIGSVG AFVHGCSLPL FLRFFADLVN SFGSNSNNVE KMMEEVLKYA LYFLVVGAAI
0101: WASSWAEISC WMWSGERQTT KMRIKYLEAA LNQDIQFFDT EVRTSDVVFA INTDAVMVQD AISEKLGNFI HYMATFVSGF IVGFTAVWQL ALVTLAVVPL
0201: IAVIGGIHTT TLSKLSNKSQ ESLSQAGNIV EQTVVQIRVV MAFVGESRAS QAYSSALKIA QKLGYKTGLA KGMGLGATYF VVFCCYALLL WYGGYLVRHH
0301: LTNGGLAIAT MFAVMIGGLA LGQSAPSMAA FAKAKVAAAK IFRIIDHKPT IERNSESGVE LDSVTGLVEL KNVDFSYPSR PDVKILNNFC LSVPAGKTIA
0401: LVGSSGSGKS TVVSLIERFY DPNSGQVLLD GQDLKTLKLR WLRQQIGLVS QEPALFATSI KENILLGRPD ADQVEIEEAA RVANAHSFII KLPDGFDTQV
0501: GERGLQLSGG QKQRIAIARA MLKNPAILLL DEATSALDSE SEKLVQEALD RFMIGRTTLI IAHRLSTIRK ADLVAVLQQG SVSEIGTHDE LFSKGENGVY
0601: AKLIKMQEAA HETAMSNARK SSARPSSARN SVSSPIMTRN SSYGRSPYSR RLSDFSTSDF SLSIDASSYP NYRNEKLAFK DQANSFWRLA KMNSPEWKYA
0701: LLGSVGSVIC GSLSAFFAYV LSAVLSVYYN PDHEYMIKQI DKYCYLLIGL SSAALVFNTL QHSFWDIVGE NLTKRVREKM LSAVLKNEMA WFDQEENESA
0801: RIAARLALDA NNVRSAIGDR ISVIVQNTAL MLVACTAGFV LQWRLALVLV AVFPVVVAAT VLQKMFMTGF SGDLEAAHAK GTQLAGEAIA NVRTVAAFNS
0901: EAKIVRLYTA NLEPPLKRCF WKGQIAGSGY GVAQFCLYAS YALGLWYASW LVKHGISDFS KTIRVFMVLM VSANGAAETL TLAPDFIKGG QAMRSVFELL
1001: DRKTEIEPDD PDTTPVPDRL RGEVELKHID FSYPSRPDIQ IFRDLSLRAR AGKTLALVGP SGCGKSSVIS LIQRFYEPSS GRVMIDGKDI RKYNLKAIRK
1101: HIAIVPQEPC LFGTTIYENI AYGHECATEA EIIQAATLAS AHKFISALPE GYKTYVGERG VQLSGGQKQR IAIARALVRK AEIMLLDEAT SALDAESERS
1201: VQEALDQACS GRTSIVVAHR LSTIRNAHVI AVIDDGKVAE QGSHSHLLKN HPDGIYARMI QLQRFTHTQV IGMTSGSSSR VKEDDA
0101: WASSWAEISC WMWSGERQTT KMRIKYLEAA LNQDIQFFDT EVRTSDVVFA INTDAVMVQD AISEKLGNFI HYMATFVSGF IVGFTAVWQL ALVTLAVVPL
0201: IAVIGGIHTT TLSKLSNKSQ ESLSQAGNIV EQTVVQIRVV MAFVGESRAS QAYSSALKIA QKLGYKTGLA KGMGLGATYF VVFCCYALLL WYGGYLVRHH
0301: LTNGGLAIAT MFAVMIGGLA LGQSAPSMAA FAKAKVAAAK IFRIIDHKPT IERNSESGVE LDSVTGLVEL KNVDFSYPSR PDVKILNNFC LSVPAGKTIA
0401: LVGSSGSGKS TVVSLIERFY DPNSGQVLLD GQDLKTLKLR WLRQQIGLVS QEPALFATSI KENILLGRPD ADQVEIEEAA RVANAHSFII KLPDGFDTQV
0501: GERGLQLSGG QKQRIAIARA MLKNPAILLL DEATSALDSE SEKLVQEALD RFMIGRTTLI IAHRLSTIRK ADLVAVLQQG SVSEIGTHDE LFSKGENGVY
0601: AKLIKMQEAA HETAMSNARK SSARPSSARN SVSSPIMTRN SSYGRSPYSR RLSDFSTSDF SLSIDASSYP NYRNEKLAFK DQANSFWRLA KMNSPEWKYA
0701: LLGSVGSVIC GSLSAFFAYV LSAVLSVYYN PDHEYMIKQI DKYCYLLIGL SSAALVFNTL QHSFWDIVGE NLTKRVREKM LSAVLKNEMA WFDQEENESA
0801: RIAARLALDA NNVRSAIGDR ISVIVQNTAL MLVACTAGFV LQWRLALVLV AVFPVVVAAT VLQKMFMTGF SGDLEAAHAK GTQLAGEAIA NVRTVAAFNS
0901: EAKIVRLYTA NLEPPLKRCF WKGQIAGSGY GVAQFCLYAS YALGLWYASW LVKHGISDFS KTIRVFMVLM VSANGAAETL TLAPDFIKGG QAMRSVFELL
1001: DRKTEIEPDD PDTTPVPDRL RGEVELKHID FSYPSRPDIQ IFRDLSLRAR AGKTLALVGP SGCGKSSVIS LIQRFYEPSS GRVMIDGKDI RKYNLKAIRK
1101: HIAIVPQEPC LFGTTIYENI AYGHECATEA EIIQAATLAS AHKFISALPE GYKTYVGERG VQLSGGQKQR IAIARALVRK AEIMLLDEAT SALDAESERS
1201: VQEALDQACS GRTSIVVAHR LSTIRNAHVI AVIDDGKVAE QGSHSHLLKN HPDGIYARMI QLQRFTHTQV IGMTSGSSSR VKEDDA
Arabidopsis Description
ABCB1ABC transporter B family member 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZR72]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.