Factsheet for Os02t0189800-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0290700-01	Rice	cytosol, plasma membrane	12.57	63.51
Os01t0695800-01	Rice	plasma membrane	20.05	57.25
Os02t0190300-01	Rice	plasma membrane	86.1	51.73
Os02t0190000-00	Rice	plasma membrane	84.36	50.76
OQU84543	Sorghum	endoplasmic reticulum, plasma membrane	81.28	49.19
Zm00001d053706_P002	Maize	mitochondrion, plasma membrane	80.75	48.59
Os05t0137200-01	Rice	plasma membrane	25.13	47.84
Os04t0481700-01	Rice	plasma membrane	42.65	47.61
TraesCS7D01G068400.1	Wheat	plasma membrane	77.14	46.83
TraesCS4A01G370600.1	Wheat	plasma membrane	77.14	46.83
VIT_14s0066g02320.t01	Wine grape	peroxisome	66.58	43.04
Bra025328.1-P	Field mustard	endoplasmic reticulum, golgi	59.22	41.44
Os05t0548300-01	Rice	plasma membrane	31.95	41.07
CDX86445	Canola	plasma membrane	66.44	39.95
Bra025326.1-P	Field mustard	plasma membrane	66.31	39.87
AT3G28345.1	Thale cress	plasma membrane	66.04	39.84
CDY04018	Canola	plasma membrane	64.44	38.84
Bra025331.1-P	Field mustard	plasma membrane	58.96	38.72
CDX85192	Canola	plasma membrane	65.64	38.69
VIT_19s0085g00060.t01	Wine grape	endoplasmic reticulum, plasma membrane, plastid	60.83	37.14
AT3G28390.1	Thale cress	plasma membrane	60.7	37.06
AT3G28360.1	Thale cress	plasma membrane	59.49	36.24
Os02t0323000-01	Rice	cytosol, peroxisome	18.58	32.86
Os03t0181750-00	Rice	plasma membrane	37.03	28.7
Os01t0534700-00	Rice	plasma membrane	41.98	28.39
Os04t0459000-01	Rice	plasma membrane	44.79	26.61
Os02t0693700-02	Rice	plasma membrane	44.65	26.42
Os05t0548500-00	Rice	plasma membrane	42.78	25.4
Os01t0695700-00	Rice	plasma membrane	41.71	24.63
Os08t0564300-04	Rice	plasma membrane	40.64	22.62
GSMUA_Achr1P18340_001	Banana	plasma membrane	60.43	21.61
Os03t0280000-01	Rice	plasma membrane	39.44	20.91
Os01t0975900-02	Rice	plasma membrane	5.75	17.06
Os01t0533900-01	Rice	endoplasmic reticulum, vacuole	18.05	16.17
Os04t0642000-01	Rice	cytosol, peroxisome, plasma membrane	8.56	10.46
Os01t0976000-01	Rice	nucleus	1.87	2.47
Os03t0181675-00	Rice	cytosol, nucleus, peroxisome, plastid	0.27	0.34

Protein Annotations

Gene3D:1.20.1560.10	MapMan:24.1.3.1.1	Gene3D:3.40.50.300	EntrezGene:4328566	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom
InterPro:ABC1_TM_sf	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	ProteinID:BAF08058.1	ProteinID:BAS77387.1	ProteinID:EAZ22036.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	InterPro:IPR011527	InterPro:IPR036640
EnsemblPlantsGene:Os02g0189800	EnsemblPlants:Os02t0189800-00	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664	PIRSF:PIRSF002773
ScanProsite:PS00211	PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24221	PANTHER:PTHR24221:SF381	UniProt:Q0E380
SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF90123	TMHMM:TMhelix	UniParc:UPI0000DF05B7	RefSeq:XP_015625027.1
SEG:seg	:	:	:	:	:

Description

Similar to Felis catus multi-drug resistance related (Fragment). (Os02t0189800-00)

Coordinates

chr2:-:4969144..4971466

Molecular Weight (calculated)

82573.0 Da

IEP (calculated)

8.296

GRAVY (calculated)

-0.020

Length

748 amino acids

Sequence
(BLAST)

001: MSGGQKQRIA IARAILKSPK ILLLDEATSA LDTESERIVQ EALDMASMGR TTIIIAHRLS TIRNADIIVV MQSGEVMELG PHDELIANEN GLYSSLVHLQ
101: QTRDSNEIDQ ICVTGSTSAV EQSNIHIMTR RFSTVSRSNS ARSLGDARDA DNTKKQKLPV PSFRRLFMLN APEWKQSLMG GFSAILFGGI QPTYSYTLGS
201: MISAYFLTDH AEIKDKTRTN ALIFLGLAVL SFFLNIGQHY NFGAMGEYLT KRIKEQMLAK ILTFEIGWFD HDKNSSGALC SQLAKDANIV RSLVGDQMAL
301: MIETISTILI GYTMGLIIAW RLALFMIVMQ PPIIVCFYVR RVLFKSMSEK SKYAQAKSSK LAAEAVSNLQ TVTAFSSQER ILRLFNQAQD GARKESIRQS
401: WFAGLGLGTP MSLMICTWAL ELWYCGRLVA DHQITNTELF QTFYILINTC RVTEEAGSMT TDLAKGADAV ASVFSILDRE TEIDPNNPHG YKPEKLKGEV
501: DIRGVDFSYP SRPDVIIFKG FTLSIQPGKS TAIVGKSGSG KSTIIGLIER FYDPIRGSVK IDGRDIKAYN LRYLRRHIGL VSQEPTLFAG TIRENIVYGI
601: DIASEVEIED AARSANAHDF ISNLKDGYDT LCGERGVQLS GGQKQRIAIA RAILKNPAIL LLDEATSALD SQSEKVVQEA LDRVMVGRTS VVVAHRLSII
701: QKCDLITMLE KGTIVEKGTH TSLMAKGFSG TYCSLVSLQQ AGNQQVQL

Best Arabidopsis Sequence Match ( AT3G28345.1 )
(BLAST)

0001: MGKEEEKESG RNKMNCFGSV RSIFMHADGV DWLLMGLGLI GAVGDGFTTP LVLLITSKLM NNIGGSSFNT DTFMQSISKN SVALLYVACG SWVVCFLEGY
0101: CWTRTGERQT ARMREKYLRA VLRQDVGYFD LHVTSTSDVI TSVSSDSFVI QDVLSEKLPN FLMSASTFVG SYIVGFILLW RLAIVGLPFI VLLVIPGLMY
0201: GRALISISRK IREEYNEAGF VAEQAISSVR TVYAFSGERK TISKFSTALQ GSVKLGIKQG LAKGITIGSN GITFAMWGFM SWYGSRMVMY HGAQGGTVFA
0301: VAAAIAIGGV SLGGGLSNLK YFFEAASVGE RIMEVINRVP KIDSDNPDGH KLEKIRGEVE FKNVKFVYPS RLETSIFDDF CLRVPSGKTV ALVGGSGSGK
0401: STVISLLQRF YDPLAGEILI DGVSIDKLQV KWLRSQMGLV SQEPALFATT IKENILFGKE DASMDDVVEA AKASNAHNFI SQLPNGYETQ VGERGVQMSG
0501: GQKQRIAIAR AIIKSPTILL LDEATSALDS ESERVVQEAL ENASIGRTTI LIAHRLSTIR NADVISVVKN GHIVETGSHD ELMENIDGQY STLVHLQQIE
0601: KQDINVSVKI GPISDPSKDI RNSSRVSTLS RSSSANSVTG PSTIKNLSED NKPQLPSFKR LLAMNLPEWK QALYGCISAT LFGAIQPAYA YSLGSMVSVY
0701: FLTSHDEIKE KTRIYALSFV GLAVLSFLIN ISQHYNFAYM GEYLTKRIRE RMLSKVLTFE VGWFDRDENS SGAICSRLAK DANVVRSLVG DRMALVVQTV
0801: SAVTIAFTMG LVIAWRLALV MIAVQPVIIV CFYTRRVLLK SMSKKAIKAQ DESSKLAAEA VSNVRTITAF SSQERIMKML EKAQESPRRE SIRQSWFAGF
0901: GLAMSQSLTS CTWALDFWYG GRLIQDGYIT AKALFETFMI LVSTGRVIAD AGSMTTDLAK GSDAVGSVFA VLDRYTSIDP EDPDGYETER ITGQVEFLDV
1001: DFSYPTRPDV IIFKNFSIKI EEGKSTAIVG PSGSGKSTII GLIERFYDPL KGIVKIDGRD IRSYHLRSLR RHIALVSQEP TLFAGTIREN IIYGGVSDKI
1101: DEAEIIEAAK AANAHDFITS LTEGYDTYCG DRGVQLSGGQ KQRIAIARAV LKNPSVLLLD EATSALDSQS ERVVQDALER VMVGRTSVVI AHRLSTIQNC
1201: DAIAVLDKGK LVERGTHSSL LSKGPTGIYF SLVSLQTTSG

Arabidopsis Description

ABCB15ABC transporter B family member 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHD1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.