Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER92449 | Sorghum | plasma membrane | 94.61 | 94.48 |
| TraesCS4A01G101600.3 | Wheat | cytosol, plasma membrane, plastid | 94.12 | 94.25 |
| Zm00001d028671_P002 | Maize | cytosol, plasma membrane, vacuole | 93.34 | 94.14 |
| TraesCS4D01G203900.2 | Wheat | cytosol, plasma membrane, plastid | 93.98 | 94.11 |
| Zm00001d047780_P002 | Maize | plasma membrane | 94.19 | 94.06 |
| TraesCS4B01G203000.1 | Wheat | cytosol, plasma membrane, plastid | 93.91 | 94.04 |
| HORVU4Hr1G058580.2 | Barley | cytosol, plasma membrane, plastid | 93.91 | 94.04 |
| GSMUA_Achr3P17720_001 | Banana | peroxisome | 75.97 | 85.62 |
| Solyc04g010310.2.1 | Tomato | plasma membrane | 74.27 | 81.56 |
| VIT_13s0019g00310.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 74.49 | 80.85 |
| KRG92957 | Soybean | nucleus | 79.94 | 80.63 |
| KRH36206 | Soybean | cytosol, golgi, plastid | 79.73 | 80.41 |
| KRH70512 | Soybean | extracellular | 78.81 | 79.32 |
| KRH01590 | Soybean | mitochondrion | 78.53 | 79.03 |
| CDY24958 | Canola | mitochondrion, plasma membrane, plastid | 77.25 | 78.14 |
| AT3G55320.1 | Thale cress | cytosol, peroxisome, plasma membrane | 77.75 | 77.91 |
| CDY20443 | Canola | cytosol, mitochondrion, plasma membrane | 77.18 | 77.73 |
| CDY07647 | Canola | cytosol | 77.04 | 77.59 |
| Bra000136.1-P | Field mustard | cytosol, mitochondrion, peroxisome | 77.04 | 77.48 |
| CDY53591 | Canola | cytosol, mitochondrion, plasma membrane | 77.25 | 77.41 |
| AT2G39480.1 | Thale cress | cytosol, mitochondrion, plasma membrane | 77.18 | 77.4 |
| Bra005036.1-P | Field mustard | mitochondrion | 77.18 | 77.34 |
| VIT_06s0004g04100.t01 | Wine grape | cytosol | 76.97 | 77.3 |
| CDX76106 | Canola | cytosol, golgi, peroxisome | 76.54 | 77.14 |
| CDY65312 | Canola | cytosol | 76.47 | 77.13 |
| Bra014756.1-P | Field mustard | cytosol, golgi, peroxisome | 76.47 | 77.07 |
| Os01t0695800-01 | Rice | plasma membrane | 9.64 | 51.91 |
| Os01t0290700-01 | Rice | cytosol, plasma membrane | 5.24 | 50.0 |
| Os04t0642000-01 | Rice | cytosol, peroxisome, plasma membrane | 19.56 | 45.1 |
| Os05t0137200-01 | Rice | plasma membrane | 12.19 | 43.77 |
| Os04t0459000-01 | Rice | plasma membrane | 38.34 | 42.97 |
| Os02t0693700-02 | Rice | plasma membrane | 36.99 | 41.3 |
| Os02t0190300-01 | Rice | plasma membrane | 35.01 | 39.68 |
| Os02t0189800-00 | Rice | mitochondrion | 20.91 | 39.44 |
| Os08t0564300-04 | Rice | plasma membrane | 37.42 | 39.29 |
| Os02t0190000-00 | Rice | plasma membrane | 34.59 | 39.26 |
| Os05t0548500-00 | Rice | plasma membrane | 34.73 | 38.89 |
| Os05t0548300-01 | Rice | plasma membrane | 15.95 | 38.66 |
| Os01t0534700-00 | Rice | plasma membrane | 29.2 | 37.25 |
| Os01t0695700-00 | Rice | plasma membrane | 32.81 | 36.54 |
| Os01t0533900-01 | Rice | endoplasmic reticulum, vacuole | 20.98 | 35.45 |
| Os03t0181750-00 | Rice | plasma membrane | 24.1 | 35.23 |
| Os04t0481700-01 | Rice | plasma membrane | 16.51 | 34.78 |
| Os02t0323000-01 | Rice | cytosol, peroxisome | 9.28 | 30.97 |
| Os01t0975900-02 | Rice | plasma membrane | 4.68 | 26.19 |
| Os03t0181675-00 | Rice | cytosol, nucleus, peroxisome, plastid | 7.09 | 17.15 |
| Os01t0976000-01 | Rice | nucleus | 4.25 | 10.58 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | EntrezGene:4332438 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom |
| InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | ProteinID:ABF95300.1 | ProteinID:BAS83562.1 | ncoils:Coil | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 |
| GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 | InterPro:IPR011527 | InterPro:IPR036640 | EnsemblPlantsGene:Os03g0280000 |
| EnsemblPlants:Os03t0280000-01 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | PFscan:PS50893 | PFscan:PS50929 |
| PANTHER:PTHR24222 | PANTHER:PTHR24222:SF27 | UniProt:Q10N72 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 |
| TMHMM:TMhelix | UniParc:UPI0000DB45AC | RefSeq:XP_015630569.1 | SEG:seg | : | : |
Description
ABC TRANSPORTER B FAMILY MEMBER 13Similar to MDR-like ABC transporter. (Os03t0280000-01)
Coordinates
chr3:-:9557535..9566491
Molecular Weight (calculated)
155654.0 Da
IEP (calculated)
6.449
GRAVY (calculated)
0.041
Length
1411 amino acids
Sequence
(BLAST)
(BLAST)
0001: MMPTGLFGWA SPHVQPLTPV SEVSEPPESP SPYGDGPAGD AGVGAREGEG LGPGEEEVED DEVEPPPSAV SFWRLFEFAD GIDWALMVAG ALAAAAHGAA
0101: LVIYLHYFGR SLNLLDSERV ESALHGRSDE LLHRFKEHAL YIVYIAGGVF AAGWIEVSCW ILTGERQTAV IRSKYVQVLL NQDMSFFDTY GNNGDIVSQV
0201: LSDVLLIQSA ISEKVGNYIH NMATFVGGLV VGLINCWQIT LLTLATGPLI VAAGGISNIF LHRLAENIQD AYAEAASIAE QAIAYIRTLY AFTNETLAKY
0301: SYATSLQATL RYGILISLVQ GIGLGFTYGL AICSCALQLW VGRHLIARGK ADGGQVVVAL FSVILSGLGL NQAATNFYSF EQGRIAAYRL YEMISRSTSS
0401: TNQEGSTLPL VQGNIEFRNV YFSYLSRPEI PILSGFFLTV PARKTVALVG RNGSGKSSII PLMERFYDPT LGEVLLDGEN IKNLKVEWLR SQIGLVTQEP
0501: ALLSLSIREN IAYGRSATFD QIEEAAKTAH AHGFISSLEK GYETQVGRAG MALSDEQKIK ISIARAVLSN PSILLLDEVT GGLDFEAEKA VQEALDVLML
0601: GRSTIIIARR LSLIKNADYI AVMEEGHLVE MGTHDELLNL DGLYAELLRC EEATKLPKRM PTKNGKERKS LQIEDLSASQ SFQESSSPKM AKSPSLQRTH
0701: GMLQFWRSDT NKNSHDSPKD QSPPSEQTID NGIPLVATER VPSIKRQDSF EMKLPDLPKV DIHPIQRQSS KNSEPDSPIS PLLTSDPKNE RSHSQTFSRP
0801: QSERDDTSSE QSEPEELQHH KPPSFWRLAA LSIAEWPYAL LGTIGAAIFG SFNPLLAYTI ALIVSAYYRI DVSDMHHEVN RWCLFIVGMG VITVLVNWLQ
0901: HFYFGIMGEK MTERIRRMMF SAILRNEVGW FDKEENSADT LSMRLANDAT FVRAAFSNRL SIFIQDTAAV SVALLIGMLL GWRVALVALA TLPVLVISAI
1001: AQKLWLAGFS KGIQEMHRKA SLVLEDAVRN IYTVVAFCAG NKIMELYRLH LCKILKQSLL QGLAIGFGFG FSQFLLFACN ALLLWYTAIS VDKQRLTIAT
1101: GLKEYILFSF ASFALVEPFG LAPYILKRRK SLISVFQIID REPKIDPDDN TGLKPPNVYG SIEFKNVDFS YPARPEILVL SNFNLKVSGG QTVAVVGVSG
1201: SGKSTIISLI ERFYDPVTGQ VLLDGRDIKS FNLRWLRSHM GLIQQEPVIF STTIRENIIY ARHNATEAEM KEAARIANAH HFISSLPHGY DTHVGMRGVD
1301: LTAGQKQRIA IARVVLKNAP ILLLDEASSA IESESSRVVQ EALDTLVMGN KTTILIAHRA AMMKHVDNIV VLNGGRIVEQ GTHDSLMDLN GLYVRLMQPH
1401: FGKGLRQHRL M
0101: LVIYLHYFGR SLNLLDSERV ESALHGRSDE LLHRFKEHAL YIVYIAGGVF AAGWIEVSCW ILTGERQTAV IRSKYVQVLL NQDMSFFDTY GNNGDIVSQV
0201: LSDVLLIQSA ISEKVGNYIH NMATFVGGLV VGLINCWQIT LLTLATGPLI VAAGGISNIF LHRLAENIQD AYAEAASIAE QAIAYIRTLY AFTNETLAKY
0301: SYATSLQATL RYGILISLVQ GIGLGFTYGL AICSCALQLW VGRHLIARGK ADGGQVVVAL FSVILSGLGL NQAATNFYSF EQGRIAAYRL YEMISRSTSS
0401: TNQEGSTLPL VQGNIEFRNV YFSYLSRPEI PILSGFFLTV PARKTVALVG RNGSGKSSII PLMERFYDPT LGEVLLDGEN IKNLKVEWLR SQIGLVTQEP
0501: ALLSLSIREN IAYGRSATFD QIEEAAKTAH AHGFISSLEK GYETQVGRAG MALSDEQKIK ISIARAVLSN PSILLLDEVT GGLDFEAEKA VQEALDVLML
0601: GRSTIIIARR LSLIKNADYI AVMEEGHLVE MGTHDELLNL DGLYAELLRC EEATKLPKRM PTKNGKERKS LQIEDLSASQ SFQESSSPKM AKSPSLQRTH
0701: GMLQFWRSDT NKNSHDSPKD QSPPSEQTID NGIPLVATER VPSIKRQDSF EMKLPDLPKV DIHPIQRQSS KNSEPDSPIS PLLTSDPKNE RSHSQTFSRP
0801: QSERDDTSSE QSEPEELQHH KPPSFWRLAA LSIAEWPYAL LGTIGAAIFG SFNPLLAYTI ALIVSAYYRI DVSDMHHEVN RWCLFIVGMG VITVLVNWLQ
0901: HFYFGIMGEK MTERIRRMMF SAILRNEVGW FDKEENSADT LSMRLANDAT FVRAAFSNRL SIFIQDTAAV SVALLIGMLL GWRVALVALA TLPVLVISAI
1001: AQKLWLAGFS KGIQEMHRKA SLVLEDAVRN IYTVVAFCAG NKIMELYRLH LCKILKQSLL QGLAIGFGFG FSQFLLFACN ALLLWYTAIS VDKQRLTIAT
1101: GLKEYILFSF ASFALVEPFG LAPYILKRRK SLISVFQIID REPKIDPDDN TGLKPPNVYG SIEFKNVDFS YPARPEILVL SNFNLKVSGG QTVAVVGVSG
1201: SGKSTIISLI ERFYDPVTGQ VLLDGRDIKS FNLRWLRSHM GLIQQEPVIF STTIRENIIY ARHNATEAEM KEAARIANAH HFISSLPHGY DTHVGMRGVD
1301: LTAGQKQRIA IARVVLKNAP ILLLDEASSA IESESSRVVQ EALDTLVMGN KTTILIAHRA AMMKHVDNIV VLNGGRIVEQ GTHDSLMDLN GLYVRLMQPH
1401: FGKGLRQHRL M
0001: MMISRGLFGW SPPHMQPLTP VSEVSEPPES PSPYLDPGAE SGGGTGTAAA LAEADEEMDD QDELEPPPAA VPFSQLFACA DRFDWVLMIV GSVAAAAHGT
0101: ALIVYLHYFA KIVDVLAFSN DSSQQRSEHQ FDRLVQLSLT IVYIAGGVFI SGWIEVSCWI LTGERQTAVI RSKYVQVLLN QDMSFFDTYG NNGDIVSQVL
0201: SDVLLIQSAL SEKVGNYIHN MATFISGLVI GFVNCWEIAL ITLATGPFIV AAGGISNIFL HRLAENIQDA YAEAAGIAEQ AISYIRTLYA FTNETLAKYS
0301: YATSLQATLR YGILISLVQG LGLGFTYGLA ICSCALQLWI GRFFVHNGRA NGGEIIAALF AVILSGLGLN QAATNFYSFD QGRIAAYRLF EMITRSSSVA
0401: NQEGAVLASV QGNIEFRNVY FSYLSRPEIP ILSGFYLTVP AKKAVALVGR NGSGKSSIIP LMERFYDPTL GEVLLDGENI KNLKLEWLRS QIGLVTQEPA
0501: LLSLSIRENI AYGRDATLDQ IEEAAKNAHA HTFISSLEKG YETQVGRAGL AMTEEQKIKL SIARAVLLNP TILLLDEVTG GLDFEAERIV QEALDLLMLG
0601: RSTIIIARRL SLIKNADYIA VMEEGQLVEM GTHDELINLG GLYAELLKCE EATKLPRRMP VRNYKESAVF EVERDSSAGC GVQEPSSPKM IKSPSLQRGS
0701: GVFRPQELCF DTEESPKAHS PASEKTGEDG MSLDCADKEP TIKRQDSFEM RLPHLPKVDV QCPQQKSNGS EPESPVSPLL TSDPKNERSH SQTFSRPLSS
0801: PDDTKANGKA SKDAQHKESP SFWRLAQLSF PEWLYAVLGS LGAAIFGSFN PLLAYVIALV VTEYYKSKGG HLREEVDKWC LIIACMGIVT VVANFLQHFY
0901: FGIMGEKMTE RVRRMMFSAM LRNEVGWFDD EENSPDTLSM RLANDATFVR AAFSNRLSIF IQDSFAVIVA LLIGLLLGWR LALVALATLP ILTLSAIAQK
1001: LWLAGFSKGI QEMHRKASLV LEDAVRNIYT VVAFCAGNKV MELYRMQLQR ILRQSYLHGM AIGFAFGFSQ FLLFACNALL LWCTALSVNR GYMKLSTAIT
1101: EYMVFSFATF ALVEPFGLAP YILKRRKSLI SVFEIVDRVP TIEPDDNSAL KPPNVYGSIE LKNVDFCYPT RPEILVLSNF SLKISGGQTV AVVGVSGSGK
1201: STIISLVERY YDPVAGQVLL DGRDLKLYNL RWLRSHMGLV QQEPIIFSTT IRENIIYARH NASEAEMKEA ARIANAHHFI SSLPHGYDTH IGMRGVELTP
1301: GQKQRIAIAR VVLKNAPIIL IDEASSSIES ESSRVVQEAL DTLIMGNKTT ILIAHRAAMM RHVDNIVVLN GGRIVEEGTH DSLAAKNGLY VRLMQPHFGK
1401: GLRQHRLI
0101: ALIVYLHYFA KIVDVLAFSN DSSQQRSEHQ FDRLVQLSLT IVYIAGGVFI SGWIEVSCWI LTGERQTAVI RSKYVQVLLN QDMSFFDTYG NNGDIVSQVL
0201: SDVLLIQSAL SEKVGNYIHN MATFISGLVI GFVNCWEIAL ITLATGPFIV AAGGISNIFL HRLAENIQDA YAEAAGIAEQ AISYIRTLYA FTNETLAKYS
0301: YATSLQATLR YGILISLVQG LGLGFTYGLA ICSCALQLWI GRFFVHNGRA NGGEIIAALF AVILSGLGLN QAATNFYSFD QGRIAAYRLF EMITRSSSVA
0401: NQEGAVLASV QGNIEFRNVY FSYLSRPEIP ILSGFYLTVP AKKAVALVGR NGSGKSSIIP LMERFYDPTL GEVLLDGENI KNLKLEWLRS QIGLVTQEPA
0501: LLSLSIRENI AYGRDATLDQ IEEAAKNAHA HTFISSLEKG YETQVGRAGL AMTEEQKIKL SIARAVLLNP TILLLDEVTG GLDFEAERIV QEALDLLMLG
0601: RSTIIIARRL SLIKNADYIA VMEEGQLVEM GTHDELINLG GLYAELLKCE EATKLPRRMP VRNYKESAVF EVERDSSAGC GVQEPSSPKM IKSPSLQRGS
0701: GVFRPQELCF DTEESPKAHS PASEKTGEDG MSLDCADKEP TIKRQDSFEM RLPHLPKVDV QCPQQKSNGS EPESPVSPLL TSDPKNERSH SQTFSRPLSS
0801: PDDTKANGKA SKDAQHKESP SFWRLAQLSF PEWLYAVLGS LGAAIFGSFN PLLAYVIALV VTEYYKSKGG HLREEVDKWC LIIACMGIVT VVANFLQHFY
0901: FGIMGEKMTE RVRRMMFSAM LRNEVGWFDD EENSPDTLSM RLANDATFVR AAFSNRLSIF IQDSFAVIVA LLIGLLLGWR LALVALATLP ILTLSAIAQK
1001: LWLAGFSKGI QEMHRKASLV LEDAVRNIYT VVAFCAGNKV MELYRMQLQR ILRQSYLHGM AIGFAFGFSQ FLLFACNALL LWCTALSVNR GYMKLSTAIT
1101: EYMVFSFATF ALVEPFGLAP YILKRRKSLI SVFEIVDRVP TIEPDDNSAL KPPNVYGSIE LKNVDFCYPT RPEILVLSNF SLKISGGQTV AVVGVSGSGK
1201: STIISLVERY YDPVAGQVLL DGRDLKLYNL RWLRSHMGLV QQEPIIFSTT IRENIIYARH NASEAEMKEA ARIANAHHFI SSLPHGYDTH IGMRGVELTP
1301: GQKQRIAIAR VVLKNAPIIL IDEASSSIES ESSRVVQEAL DTLIMGNKTT ILIAHRAAMM RHVDNIVVLN GGRIVEEGTH DSLAAKNGLY VRLMQPHFGK
1401: GLRQHRLI
Arabidopsis Description
ABCB20ABC transporter B family member 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9M3B9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.