Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G101600.3 | Wheat | cytosol, plasma membrane, plastid | 99.57 | 99.57 |
| HORVU4Hr1G058580.2 | Barley | cytosol, plasma membrane, plastid | 99.22 | 99.22 |
| TraesCS4B01G203000.1 | Wheat | cytosol, plasma membrane, plastid | 99.08 | 99.08 |
| Os03t0280000-01 | Rice | plasma membrane | 94.11 | 93.98 |
| EER92449 | Sorghum | plasma membrane | 93.75 | 93.49 |
| Zm00001d047780_P002 | Maize | plasma membrane | 93.61 | 93.35 |
| Zm00001d028671_P002 | Maize | cytosol, plasma membrane, vacuole | 92.62 | 93.28 |
| GSMUA_Achr3P17720_001 | Banana | peroxisome | 75.37 | 84.82 |
| Solyc04g010310.2.1 | Tomato | plasma membrane | 74.02 | 81.17 |
| TraesCS3D01G541700.1 | Wheat | cytosol, plasma membrane, vacuole | 80.34 | 80.45 |
| VIT_13s0019g00310.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 73.88 | 80.08 |
| KRG92957 | Soybean | nucleus | 78.57 | 79.13 |
| KRH36206 | Soybean | cytosol, golgi, plastid | 78.5 | 79.06 |
| KRH01590 | Soybean | mitochondrion | 77.86 | 78.25 |
| KRH70512 | Soybean | extracellular | 77.71 | 78.1 |
| CDY20443 | Canola | cytosol, mitochondrion, plasma membrane | 76.86 | 77.3 |
| CDY24958 | Canola | mitochondrion, plasma membrane, plastid | 76.37 | 77.13 |
| CDY07647 | Canola | cytosol | 76.3 | 76.73 |
| CDY53591 | Canola | cytosol, mitochondrion, plasma membrane | 76.65 | 76.7 |
| AT2G39480.1 | Thale cress | cytosol, mitochondrion, plasma membrane | 76.58 | 76.69 |
| Bra005036.1-P | Field mustard | mitochondrion | 76.58 | 76.63 |
| VIT_06s0004g04100.t01 | Wine grape | cytosol | 76.37 | 76.58 |
| AT3G55320.1 | Thale cress | cytosol, peroxisome, plasma membrane | 76.51 | 76.56 |
| Bra000136.1-P | Field mustard | cytosol, mitochondrion, peroxisome | 76.15 | 76.48 |
| CDY65312 | Canola | cytosol | 75.66 | 76.2 |
| CDX76106 | Canola | cytosol, golgi, peroxisome | 75.51 | 76.0 |
| Bra014756.1-P | Field mustard | cytosol, golgi, peroxisome | 75.44 | 75.93 |
| TraesCS2D01G322600.1 | Wheat | cytosol, peroxisome, plasma membrane | 37.83 | 42.2 |
| TraesCS2D01G523100.2 | Wheat | cytosol | 37.76 | 41.86 |
| TraesCS6D01G250000.1 | Wheat | golgi | 36.69 | 41.0 |
| TraesCS6D01G107600.1 | Wheat | cytosol, plasma membrane, vacuole | 25.55 | 39.6 |
| TraesCS1D01G082900.2 | Wheat | cytosol, peroxisome, plasma membrane | 35.27 | 38.95 |
| TraesCS7D01G284100.1 | Wheat | cytosol | 37.9 | 38.84 |
| TraesCS3D01G258100.1 | Wheat | plasma membrane | 34.21 | 38.56 |
| TraesCS7D01G068400.1 | Wheat | plasma membrane | 33.43 | 38.23 |
| TraesCS3D01G257900.1 | Wheat | peroxisome | 34.21 | 38.19 |
| TraesCS3D01G257500.1 | Wheat | plasma membrane | 34.0 | 38.14 |
| TraesCS2D01G010500.1 | Wheat | plasma membrane | 33.78 | 37.84 |
| TraesCS1D01G374300.1 | Wheat | cytosol, peroxisome, plasma membrane | 34.07 | 37.83 |
| TraesCS2D01G010400.1 | Wheat | plasma membrane | 33.5 | 37.67 |
| TraesCS3D01G258300.1 | Wheat | cytosol, peroxisome, plasma membrane | 32.93 | 36.68 |
| TraesCS3D01G258200.2 | Wheat | peroxisome | 32.72 | 36.62 |
| TraesCS3D01G362700.1 | Wheat | cytosol, peroxisome, plasma membrane | 33.07 | 36.43 |
| TraesCS7D01G298600.1 | Wheat | peroxisome | 31.65 | 35.45 |
| TraesCS2D01G339000.1 | Wheat | plasma membrane | 31.09 | 34.68 |
| TraesCS7D01G298400.1 | Wheat | peroxisome | 30.38 | 33.86 |
| TraesCS6D01G131900.1 | Wheat | plasma membrane | 29.67 | 33.31 |
| TraesCS4D01G296900.1 | Wheat | peroxisome | 30.8 | 28.93 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 |
| InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | PFscan:PS50893 |
| PFscan:PS50929 | PANTHER:PTHR24222 | PANTHER:PTHR24222:SF27 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 |
| TMHMM:TMhelix | EnsemblPlantsGene:TraesCS4D01G203900 | EnsemblPlants:TraesCS4D01G203900.2 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr4D:+:351456948..351465288
Molecular Weight (calculated)
155532.0 Da
IEP (calculated)
6.517
GRAVY (calculated)
0.027
Length
1409 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVPSGLFGWA SPHVQPLTPV SEVSEPPESP SPYGDGPSGD AGVGVREGEG ADDEDVEEDE VEPPPAAVSF WRLFEFADGL DWALMAAGAL AAAAHGAALV
0101: VYLHYFGRSL NLLDSERIQS ALHGRSDELL NQFKQHALYI IYIAAGVFVA GWIEVSCWIL TGERQTAVIR SRYVQVLLNQ DMSFFDTYGN NGDIVSQVLS
0201: DVLLIQSAIS EKVGNYIHNM ATFVGGLIVG LLNCWQIALL TLATGPLIVA AGGISNIFLH RLAENIQDAY AEAASIAEQA TSYIRTLYAF TNETLAKYSY
0301: ATSLQATLRY GILISLVQGI GLGFTYGLAI CSCALQLWVG RHLISRGKAD GGQVVVALFA VILSGLGLNQ AATNFYSFEQ GRIAAYRLYE MISRSTSSTN
0401: LEGTTIPQVQ GNIEFRNVYF SYLSRPEIPI LSGFFLSVPA RKTVALVGRN GSGKSSIIPL MERFYDPTLG EVLLDGENIK NLKVEWLRSQ IGLVTQEPAL
0501: LSLSIRENIA YGRFATFDQI EEAAKTAHAH GFISSLEKGY ETQVGRAGMA LTDEQKIKIS IARAVLSSPS ILLLDEVTGG LDFEAEKAVQ GALDVLMLGR
0601: STIIIARRLS LIKHADYIAV MEEGHLVEMG THDELLNLDG LYAELLRCEE ATKLPKRMPT KNSRERKSLQ FEDPPISQNF QESSSPKMAK SPSLQRTHGM
0701: LQFWRSDTTR NSHDSPKDRS PPPEQTTDNG IPLVATERAP SIKRHDSFEM ELPNLPKVDI HPIQRQSSKN AGPDSPISPL LTSDPKNERS HSQTFSRPQS
0801: ERDDTSSEQS EPDELQHHKP PSFWRLAALS IAEWPYALLG TIGAAIFGSF NPLLAYTIAL TVSAYYQIEV SDMRHEVNRW CLFIVGMGVI TVLVNWLQHF
0901: YFGIMGEKMT ERIRRMMFSA MLRNEAGWFD KEENSADTLS MRLANDATFV RAAFSNRLSI FIQDTAAISV ALLIGMLLGW RVALVALATL PVLVISAIAQ
1001: KLWLAGFSKG IQEMHRKASL VLEDAVRNIY TVVAFCAGDK IMELYKLHLC KILKQSLVHG LAIGFGFGFS QFLLFACNAL LLWYIATSVD KQRLTIATGL
1101: KQYILFSFAS FALVEPFGLA PYILKRRKSL TSVFEIIDRE PKIDPDDNTG LKPPNVYGSI EFKNVDFSYP VRPEIFVLSN FNLKVSGGQT VAVVGVSGSG
1201: KSTIISLIER FYDPMSGQVL LDGRDLKSFN LRWLRSHMGL IQQEPVIFST TIRENIIYAR HNATEAEMKE AARIANAHHF ISSLPHGYDT HVGMRGVDLT
1301: PGQKQRIAIA RVVLKNAPIL LLDEASSAIE SESSRVVQEA LDTLVMGNKT TVLIAHRAAM MKHVDNIVVL NGGRIVEQGT HDSLMDLNGL YVRLMQPHFA
1401: KGLRQHRLG
0101: VYLHYFGRSL NLLDSERIQS ALHGRSDELL NQFKQHALYI IYIAAGVFVA GWIEVSCWIL TGERQTAVIR SRYVQVLLNQ DMSFFDTYGN NGDIVSQVLS
0201: DVLLIQSAIS EKVGNYIHNM ATFVGGLIVG LLNCWQIALL TLATGPLIVA AGGISNIFLH RLAENIQDAY AEAASIAEQA TSYIRTLYAF TNETLAKYSY
0301: ATSLQATLRY GILISLVQGI GLGFTYGLAI CSCALQLWVG RHLISRGKAD GGQVVVALFA VILSGLGLNQ AATNFYSFEQ GRIAAYRLYE MISRSTSSTN
0401: LEGTTIPQVQ GNIEFRNVYF SYLSRPEIPI LSGFFLSVPA RKTVALVGRN GSGKSSIIPL MERFYDPTLG EVLLDGENIK NLKVEWLRSQ IGLVTQEPAL
0501: LSLSIRENIA YGRFATFDQI EEAAKTAHAH GFISSLEKGY ETQVGRAGMA LTDEQKIKIS IARAVLSSPS ILLLDEVTGG LDFEAEKAVQ GALDVLMLGR
0601: STIIIARRLS LIKHADYIAV MEEGHLVEMG THDELLNLDG LYAELLRCEE ATKLPKRMPT KNSRERKSLQ FEDPPISQNF QESSSPKMAK SPSLQRTHGM
0701: LQFWRSDTTR NSHDSPKDRS PPPEQTTDNG IPLVATERAP SIKRHDSFEM ELPNLPKVDI HPIQRQSSKN AGPDSPISPL LTSDPKNERS HSQTFSRPQS
0801: ERDDTSSEQS EPDELQHHKP PSFWRLAALS IAEWPYALLG TIGAAIFGSF NPLLAYTIAL TVSAYYQIEV SDMRHEVNRW CLFIVGMGVI TVLVNWLQHF
0901: YFGIMGEKMT ERIRRMMFSA MLRNEAGWFD KEENSADTLS MRLANDATFV RAAFSNRLSI FIQDTAAISV ALLIGMLLGW RVALVALATL PVLVISAIAQ
1001: KLWLAGFSKG IQEMHRKASL VLEDAVRNIY TVVAFCAGDK IMELYKLHLC KILKQSLVHG LAIGFGFGFS QFLLFACNAL LLWYIATSVD KQRLTIATGL
1101: KQYILFSFAS FALVEPFGLA PYILKRRKSL TSVFEIIDRE PKIDPDDNTG LKPPNVYGSI EFKNVDFSYP VRPEIFVLSN FNLKVSGGQT VAVVGVSGSG
1201: KSTIISLIER FYDPMSGQVL LDGRDLKSFN LRWLRSHMGL IQQEPVIFST TIRENIIYAR HNATEAEMKE AARIANAHHF ISSLPHGYDT HVGMRGVDLT
1301: PGQKQRIAIA RVVLKNAPIL LLDEASSAIE SESSRVVQEA LDTLVMGNKT TVLIAHRAAM MKHVDNIVVL NGGRIVEQGT HDSLMDLNGL YVRLMQPHFA
1401: KGLRQHRLG
0001: MSFFDTYGNN GDIVSQVLSD VLLIQSALSE KVGNYIHNMA TFISGLIIGF VNCWEIALIT LATGPFIVAA GGISNIFLHR LAENIQDAYA EAASIAEQAV
0101: SYVRTLYAFT NETLAKYSYA TSLQATLRYG ILISLVQGLG LGFTYGLAIC SCAMQLWIGR FFVIHHRANG GEIITALFAV ILSGLGLNQA ATNFYSFDQG
0201: RIAAYRLFEM ISRSSSGTNQ EGIILSAVQG NIEFRNVYFS YLSRPEIPIL SGFYLTVPAK KAVALVGRNG SGKSSIIPLM ERFYDPTLGE VLLDGENIKN
0301: LKLEWLRSQI GLVTQEPALL SLSIRENIAY GRDATLDQIE EAAKKAHAHT FISSLEKGYE TQVGKTGLTL TEEQKIKLSI ARAVLLDPTI LLLDEVTGGL
0401: DFEAERVVQE ALDLLMLGRS TIIIARRLSL IRNADYIAVM EEGQLLEMGT HDELINLGNL YAELLKCEEA TKLPRRMPVR NYNDSAAFQA ERDSSAGRGF
0501: QEPSSPKMAK SPSLQRGHNV FRSQELCFNS EESPNDHSPA PEKLGENGSS LDVGEKEPTI KRQDSFEMRL PELPKIDIQC PQRQKSNGSD PESPISPLLI
0601: SDPQNERSHS QTFSRPLGHS DDTSASVKVA KDGQHKEPPS FWRLAQLSFP EWLYAVLGSI GAAIFGSFNP LLAYVIALVV TTYYTSKGSH LREEVDKWCL
0701: IIACMGIVTV VANFLQHFYF GIMGEKMTER VRRMMFSAML RNEVGWYDEE ENSPDTLSMR LANDATFVRA AFSNRLSIFI QDSFAVIVAI LIGLLLGWRL
0801: ALVALATLPV LTLSAIAQKL WLAGFSKGIQ EMHRKASLVL EDAVRNIYTV VAFCAGNKVM ELYRLQLQRI LRQSFFHGMA IGFAFGFSQF LLFACNALLL
0901: WYTALSVDRR YMKLSTALTE YMVFSFATFA LVEPFGLAPY ILKRRRSLAS VFEIIDRVPT IEPDDTSALS PPNVYGSIEL KNIDFCYPTR PEVLVLSNFS
1001: LKVNGGQTVA VVGVSGSGKS TIISLIERYY DPVAGQVLLD GRDLKSYNLR WLRSHMGLIQ QEPIIFSTTI RENIIYARHN ASEAEMKEAA RIANAHHFIS
1101: SLPHGYDTHI GMRGVELTQG QKQRIAIARV VLKNAPILLI DEASSSIESE SSRVVQEALD TLIMGNKTTI LIAHRVAMMR HVDNIVVLNG GKIVEEGTHD
1201: CLAGKNGLYV RLMQPHFGKN LRRHQLI
0101: SYVRTLYAFT NETLAKYSYA TSLQATLRYG ILISLVQGLG LGFTYGLAIC SCAMQLWIGR FFVIHHRANG GEIITALFAV ILSGLGLNQA ATNFYSFDQG
0201: RIAAYRLFEM ISRSSSGTNQ EGIILSAVQG NIEFRNVYFS YLSRPEIPIL SGFYLTVPAK KAVALVGRNG SGKSSIIPLM ERFYDPTLGE VLLDGENIKN
0301: LKLEWLRSQI GLVTQEPALL SLSIRENIAY GRDATLDQIE EAAKKAHAHT FISSLEKGYE TQVGKTGLTL TEEQKIKLSI ARAVLLDPTI LLLDEVTGGL
0401: DFEAERVVQE ALDLLMLGRS TIIIARRLSL IRNADYIAVM EEGQLLEMGT HDELINLGNL YAELLKCEEA TKLPRRMPVR NYNDSAAFQA ERDSSAGRGF
0501: QEPSSPKMAK SPSLQRGHNV FRSQELCFNS EESPNDHSPA PEKLGENGSS LDVGEKEPTI KRQDSFEMRL PELPKIDIQC PQRQKSNGSD PESPISPLLI
0601: SDPQNERSHS QTFSRPLGHS DDTSASVKVA KDGQHKEPPS FWRLAQLSFP EWLYAVLGSI GAAIFGSFNP LLAYVIALVV TTYYTSKGSH LREEVDKWCL
0701: IIACMGIVTV VANFLQHFYF GIMGEKMTER VRRMMFSAML RNEVGWYDEE ENSPDTLSMR LANDATFVRA AFSNRLSIFI QDSFAVIVAI LIGLLLGWRL
0801: ALVALATLPV LTLSAIAQKL WLAGFSKGIQ EMHRKASLVL EDAVRNIYTV VAFCAGNKVM ELYRLQLQRI LRQSFFHGMA IGFAFGFSQF LLFACNALLL
0901: WYTALSVDRR YMKLSTALTE YMVFSFATFA LVEPFGLAPY ILKRRRSLAS VFEIIDRVPT IEPDDTSALS PPNVYGSIEL KNIDFCYPTR PEVLVLSNFS
1001: LKVNGGQTVA VVGVSGSGKS TIISLIERYY DPVAGQVLLD GRDLKSYNLR WLRSHMGLIQ QEPIIFSTTI RENIIYARHN ASEAEMKEAA RIANAHHFIS
1101: SLPHGYDTHI GMRGVELTQG QKQRIAIARV VLKNAPILLI DEASSSIESE SSRVVQEALD TLIMGNKTTI LIAHRVAMMR HVDNIVVLNG GKIVEEGTHD
1201: CLAGKNGLYV RLMQPHFGKN LRRHQLI
Arabidopsis Description
ABCB6ABC transporter B family member 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPT1]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.