Factsheet for Bra014756.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, cytosol

Predictor Summary:

nucleus 1
golgi 2
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76106	Canola	cytosol, golgi, peroxisome	99.43	99.43
AT3G55320.1	Thale cress	cytosol, peroxisome, plasma membrane	93.64	93.11
Bra000136.1-P	Field mustard	cytosol, mitochondrion, peroxisome	89.14	88.95
Bra005036.1-P	Field mustard	mitochondrion	89.21	88.71
VIT_13s0019g00310.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	78.93	85.0
HORVU3Hr1G117250.1	Barley	mitochondrion	6.71	84.68
Solyc04g010310.2.1	Tomato	plasma membrane	77.71	84.67
KRH70512	Soybean	extracellular	84.5	84.38
KRH01590	Soybean	mitochondrion	84.5	84.38
KRG92957	Soybean	nucleus	84.21	84.27
KRH36206	Soybean	cytosol, golgi, plastid	84.0	84.06
GSMUA_Achr3P17720_001	Banana	peroxisome	73.71	82.43
KXG34231	Sorghum	cytosol, plasma membrane, vacuole	78.36	78.3
TraesCS3A01G536300.1	Wheat	cytosol, plasma membrane, vacuole	78.07	78.02
TraesCS3D01G541700.1	Wheat	cytosol, plasma membrane, vacuole	78.0	77.61
TraesCS3B01G607600.1	Wheat	cytosol, plasma membrane, vacuole	77.86	77.31
Zm00001d041947_P001	Maize	cytosol, peroxisome, plasma membrane	77.21	76.94
Zm00001d028671_P002	Maize	cytosol, plasma membrane, vacuole	76.43	76.48
Os03t0280000-01	Rice	plasma membrane	77.07	76.47
EER92449	Sorghum	plasma membrane	76.64	75.94
Zm00001d047780_P002	Maize	plasma membrane	76.64	75.94
TraesCS4B01G203000.1	Wheat	cytosol, plasma membrane, plastid	76.14	75.66
TraesCS4A01G101600.3	Wheat	cytosol, plasma membrane, plastid	76.14	75.66
TraesCS4D01G203900.2	Wheat	cytosol, plasma membrane, plastid	75.93	75.44
Bra032855.1-P	Field mustard	cytosol	4.0	47.46
Bra039042.1-P	Field mustard	plasma membrane	37.29	41.69
Bra025359.1-P	Field mustard	plasma membrane	37.0	41.37
Bra019907.1-P	Field mustard	plasma membrane	35.79	40.9
Bra032856.1-P	Field mustard	plasma membrane	36.14	40.84
Bra019135.1-P	Field mustard	plasma membrane	36.0	40.61
Bra013936.1-P	Field mustard	plasma membrane	35.64	40.44
Bra017216.1-P	Field mustard	cytosol, nucleus, plasma membrane	38.36	40.13
Bra023087.1-P	Field mustard	cytosol, nucleus, plasma membrane	38.07	39.81
Bra012621.1-P	Field mustard	plasma membrane	34.21	38.41
Bra025328.1-P	Field mustard	endoplasmic reticulum, golgi	29.0	37.98
Bra004484.1-P	Field mustard	cytosol	34.79	37.93
Bra003490.1-P	Field mustard	cytosol, nucleus, plasma membrane	34.86	37.77
Bra025326.1-P	Field mustard	plasma membrane	33.5	37.7
Bra040475.1-P	Field mustard	cytosol	34.64	37.68
Bra030503.1-P	Field mustard	cytosol, peroxisome, plasma membrane	34.21	37.54
Bra033331.1-P	Field mustard	cytosol, nucleus, plasma membrane	33.36	36.89
Bra025331.1-P	Field mustard	plasma membrane	30.0	36.87
Bra003445.1-P	Field mustard	peroxisome	33.0	36.84
Bra002094.1-P	Field mustard	cytosol, peroxisome, plasma membrane	32.29	36.72
Bra025425.1-P	Field mustard	peroxisome, plasma membrane, vacuole	30.57	34.49
Bra017539.1-P	Field mustard	plasma membrane	25.0	33.95

Protein Annotations

Gene3D:1.20.1560.10	MapMan:24.1.3.1.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf
InterPro:ABC_transporter-like	EnsemblPlantsGene:Bra014756	EnsemblPlants:Bra014756.1	EnsemblPlants:Bra014756.1-P	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439
InterPro:IPR011527	InterPro:IPR036640	UniProt:M4DE37	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664
PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24222	PANTHER:PTHR24222:SF21	SMART:SM00382	SUPFAM:SSF52540
SUPFAM:SSF90123	TMHMM:TMhelix	UniParc:UPI0002544B25	SEG:seg	:	:

Description

AT3G55320 (E=0.0) PGP20 | PGP20 (P-GLYCOPROTEIN 20); ATPase, coupled to transmembrane movement of substances

Coordinates

chrA04:+:2832518..2839392

Molecular Weight (calculated)

154275.0 Da

IEP (calculated)

5.959

GRAVY (calculated)

0.092

Length

1400 amino acids

Sequence
(BLAST)

0001: MMISRGLFGW SPPHMQPLTP VSEVSEPPES PSPYPDPSET GGTATAAQAE DDDEMEEEPD EAEPPPAAVP FSQLFACADC FDWVLMILGS VAAAAHGSAL
0101: IVYLHYFAKI VEVLAFSGAR SEDQYDRLVE LSLTIVYIAG GVFVSGWIEV SCWILTGERQ TAVIRSKYVQ VLLNQDMSFF DTYGNNGDIV SQVLSDVLLI
0201: QSALSEKVGN YIHNMATFIS GLVIGFVNCW EIALITLATG PFIVAAGGIS NIFLHRLAEN IQDAYAEAAG IAEQAISYIR TLYAFTNETL AKHAYATSLQ
0301: ATLRYGILIS LVQGLGLGFT YGLAICSCAL QLWIGRFFVT SGRANGGEIL AALFAVILSG LGLNQAATNF YSFDQGRIAA YRLFEMISPS SSVANQEGAL
0401: LASVPGKIEF RNVYFSYLSR PEIPILSGFY LTVPAKKAVA LVGRNGSGKS SIIPLMERFY DPTLGEVLLD GENIKNLKLE WLRSQIGLVT QEPALLSLSI
0501: RENIAYGRDA TLDQIEEAAK IAHAHTFISS LEKGYETQVG RAGLVMTEEQ KIKLSIARAV LLNPTILLLD EVTGGLDFEA ERIVQEALDL LMLGRSTIII
0601: ARQLSLIKNA DYIAVMEEGQ LVEMGTHDEL INLGGLYAEL LKCEEATKLP RRMPVRNYKE SAVFQIERDS SAGCGVQEPS SPKMIKSPSL QRGNGVFRPQ
0701: DLCFNTEESP NDHNPAAPEK LGENGLPLDD ADKEPTMKRQ DSFEMRLPEL PKIDVHGPQH KSNDSDPESP VSPLLTSDPK NERSHSQTFS RPLSSSDDTK
0801: ANGKDAQHKE SPSFWRLAQL SFPEWLYALL GSVGAAVFGS FNPLLAYVMA LVVTEYYKSK GGHLREQVDK WCLILAAMGI VTVFANFLQH FYFGIMGEKT
0901: TERVRRMMFS AMLRNEVGWF DHEENSPDTL SMRLANDATF VRAAFSNRLS IFIQDSFAVI VALLIGLLLG WRLALVALAT LPILSLSAIA QKLWLSGFSK
1001: GIQEMHRKAS LVLEDAVRNI YTVVAFCAGN KVMELYRMQL QRILRQSFLH GMAIGFAFGF SQFLLFACNA LLLWCTALSV KRGYMKLPTA ITEYMVFSFA
1101: TFALVEPFGL APYILKRRKS LISVFEIIDR VPTIEPDDNS ALKPPNVYGS IELKNIDFCY PSRPEVLVLS NFSLKVNGGQ TLAVVGVSGS GKSTIISLVE
1201: RYYDPVAGQV LLDGRDLKLY NLRWLRSHMG LVQQEPIIFS TTIRDNIIYA RHKASEAEMK EAARIANAHH FISSLPHGYD THVGMRGVEL TPGQKQRIAI
1301: ARVVLKNAPI ILIDEGSSSI ESESSRVVQE ALDTLIMGNK TTILIAHRAA MMRHVDNIVV LNGGRIVEEG THDALAAKNG LYVRLMLPHF GKGLRQHRLI

Best Arabidopsis Sequence Match ( AT3G55320.1 )
(BLAST)

0001: MMISRGLFGW SPPHMQPLTP VSEVSEPPES PSPYLDPGAE SGGGTGTAAA LAEADEEMDD QDELEPPPAA VPFSQLFACA DRFDWVLMIV GSVAAAAHGT
0101: ALIVYLHYFA KIVDVLAFSN DSSQQRSEHQ FDRLVQLSLT IVYIAGGVFI SGWIEVSCWI LTGERQTAVI RSKYVQVLLN QDMSFFDTYG NNGDIVSQVL
0201: SDVLLIQSAL SEKVGNYIHN MATFISGLVI GFVNCWEIAL ITLATGPFIV AAGGISNIFL HRLAENIQDA YAEAAGIAEQ AISYIRTLYA FTNETLAKYS
0301: YATSLQATLR YGILISLVQG LGLGFTYGLA ICSCALQLWI GRFFVHNGRA NGGEIIAALF AVILSGLGLN QAATNFYSFD QGRIAAYRLF EMITRSSSVA
0401: NQEGAVLASV QGNIEFRNVY FSYLSRPEIP ILSGFYLTVP AKKAVALVGR NGSGKSSIIP LMERFYDPTL GEVLLDGENI KNLKLEWLRS QIGLVTQEPA
0501: LLSLSIRENI AYGRDATLDQ IEEAAKNAHA HTFISSLEKG YETQVGRAGL AMTEEQKIKL SIARAVLLNP TILLLDEVTG GLDFEAERIV QEALDLLMLG
0601: RSTIIIARRL SLIKNADYIA VMEEGQLVEM GTHDELINLG GLYAELLKCE EATKLPRRMP VRNYKESAVF EVERDSSAGC GVQEPSSPKM IKSPSLQRGS
0701: GVFRPQELCF DTEESPKAHS PASEKTGEDG MSLDCADKEP TIKRQDSFEM RLPHLPKVDV QCPQQKSNGS EPESPVSPLL TSDPKNERSH SQTFSRPLSS
0801: PDDTKANGKA SKDAQHKESP SFWRLAQLSF PEWLYAVLGS LGAAIFGSFN PLLAYVIALV VTEYYKSKGG HLREEVDKWC LIIACMGIVT VVANFLQHFY
0901: FGIMGEKMTE RVRRMMFSAM LRNEVGWFDD EENSPDTLSM RLANDATFVR AAFSNRLSIF IQDSFAVIVA LLIGLLLGWR LALVALATLP ILTLSAIAQK
1001: LWLAGFSKGI QEMHRKASLV LEDAVRNIYT VVAFCAGNKV MELYRMQLQR ILRQSYLHGM AIGFAFGFSQ FLLFACNALL LWCTALSVNR GYMKLSTAIT
1101: EYMVFSFATF ALVEPFGLAP YILKRRKSLI SVFEIVDRVP TIEPDDNSAL KPPNVYGSIE LKNVDFCYPT RPEILVLSNF SLKISGGQTV AVVGVSGSGK
1201: STIISLVERY YDPVAGQVLL DGRDLKLYNL RWLRSHMGLV QQEPIIFSTT IRENIIYARH NASEAEMKEA ARIANAHHFI SSLPHGYDTH IGMRGVELTP
1301: GQKQRIAIAR VVLKNAPIIL IDEASSSIES ESSRVVQEAL DTLIMGNKTT ILIAHRAAMM RHVDNIVVLN GGRIVEEGTH DSLAAKNGLY VRLMQPHFGK
1401: GLRQHRLI

Arabidopsis Description

ABCB20ABC transporter B family member 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9M3B9]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.