Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG34231 | Sorghum | cytosol, plasma membrane, vacuole | 97.15 | 97.43 |
| TraesCS3A01G536300.1 | Wheat | cytosol, plasma membrane, vacuole | 91.81 | 92.08 |
| TraesCS3D01G541700.1 | Wheat | cytosol, plasma membrane, vacuole | 92.03 | 91.9 |
| TraesCS3B01G607600.1 | Wheat | cytosol, plasma membrane, vacuole | 91.74 | 91.42 |
| GSMUA_Achr3P17720_001 | Banana | peroxisome | 76.37 | 85.7 |
| HORVU3Hr1G117180.10 | Barley | plastid | 84.84 | 83.65 |
| Zm00001d028671_P002 | Maize | cytosol, plasma membrane, vacuole | 80.07 | 80.41 |
| Solyc04g010310.2.1 | Tomato | plasma membrane | 73.38 | 80.23 |
| VIT_13s0019g00310.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 74.23 | 80.23 |
| Zm00001d047780_P002 | Maize | plasma membrane | 80.28 | 79.83 |
| KRH70512 | Soybean | extracellular | 79.15 | 79.32 |
| KRG92957 | Soybean | nucleus | 78.86 | 79.2 |
| KRH36206 | Soybean | cytosol, golgi, plastid | 78.58 | 78.91 |
| KRH01590 | Soybean | mitochondrion | 78.58 | 78.74 |
| CDY24958 | Canola | mitochondrion, plasma membrane, plastid | 77.01 | 77.56 |
| AT3G55320.1 | Thale cress | cytosol, peroxisome, plasma membrane | 77.72 | 77.56 |
| VIT_06s0004g04100.t01 | Wine grape | cytosol | 77.51 | 77.51 |
| CDX76106 | Canola | cytosol, golgi, peroxisome | 77.08 | 77.36 |
| CDY65312 | Canola | cytosol | 77.01 | 77.34 |
| CDY07647 | Canola | cytosol | 77.01 | 77.23 |
| Bra014756.1-P | Field mustard | cytosol, golgi, peroxisome | 76.94 | 77.21 |
| Bra000136.1-P | Field mustard | cytosol, mitochondrion, peroxisome | 76.94 | 77.05 |
| CDY20443 | Canola | cytosol, mitochondrion, plasma membrane | 76.8 | 77.02 |
| CDY53591 | Canola | cytosol, mitochondrion, plasma membrane | 76.94 | 76.78 |
| Bra005036.1-P | Field mustard | mitochondrion | 76.87 | 76.7 |
| AT2G39480.1 | Thale cress | cytosol, mitochondrion, plasma membrane | 76.8 | 76.69 |
| Zm00001d025590_P002 | Maize | cytosol, nucleus, plasma membrane | 38.22 | 42.18 |
| Zm00001d051514_P002 | Maize | mitochondrion | 37.86 | 42.16 |
| Zm00001d026426_P005 | Maize | cytosol | 37.37 | 41.24 |
| Zm00001d002119_P006 | Maize | cytosol | 36.94 | 41.0 |
| Zm00001d053706_P002 | Maize | mitochondrion, plasma membrane | 33.95 | 38.37 |
| Zm00001d043762_P001 | Maize | cytosol | 34.52 | 38.1 |
| Zm00001d009448_P001 | Maize | cytosol, peroxisome, plasma membrane | 34.23 | 38.05 |
| Zm00001d008178_P001 | Maize | cytosol, peroxisome, plasma membrane, plastid | 34.59 | 38.03 |
| Zm00001d031871_P001 | Maize | cytosol | 37.72 | 37.43 |
| Zm00001d011644_P002 | Maize | plasma membrane | 34.16 | 37.35 |
| Zm00001d016794_P001 | Maize | plasma membrane | 33.38 | 37.34 |
| Zm00001d009447_P002 | Maize | plasma membrane | 33.17 | 36.87 |
| Zm00001d005528_P001 | Maize | plasma membrane | 31.25 | 36.49 |
| Zm00001d040562_P002 | Maize | cytosol, peroxisome, plasma membrane | 34.59 | 36.4 |
| Zm00001d043766_P005 | Maize | cytosol | 32.81 | 36.07 |
| Zm00001d044564_P008 | Maize | cytosol, peroxisome, plasma membrane | 33.81 | 35.9 |
| Zm00001d024600_P002 | Maize | peroxisome | 31.89 | 35.47 |
| Zm00001d049565_P001 | Maize | peroxisome | 31.17 | 34.65 |
| Zm00001d004442_P001 | Maize | plastid | 31.03 | 28.74 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | UniProt:A0A1D6MZY8 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom |
| InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 |
| InterPro:IPR011527 | InterPro:IPR036640 | ProteinID:ONM34135.1 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 |
| PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24222 | PANTHER:PTHR24222:SF21 | SMART:SM00382 | SUPFAM:SSF52540 |
| SUPFAM:SSF90123 | TMHMM:TMhelix | UniParc:UPI0008447EDF | EnsemblPlantsGene:Zm00001d041947 | EnsemblPlants:Zm00001d041947_P001 | EnsemblPlants:Zm00001d041947_T001 |
| SEG:seg | : | : | : | : | : |
Description
ABC transporter B family member 6
Coordinates
chr3:+:144956319..144967571
Molecular Weight (calculated)
154989.0 Da
IEP (calculated)
6.662
GRAVY (calculated)
0.099
Length
1405 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVSRGLFGWS PPHVQPLTPV SETSEPPESP SPYAADLGLG GDGAPPPDDD AQPPLDDADD DPDPPPAAVP FKRLFACADR LDWALMVAGS LAAAAHGVAL
0101: VVYLHLFGKA INSLHAHGRH THDLFHDINQ AIAYALFIPL LTHPHALYFL YIAIGVFFAA WIEVSCWILT GERQTAVIRS KYVQVLLNQD MSFFDTYGNN
0201: GDIVSQVLSD VLLIQSALSE KVGNYIHNMA TFFGGLVIGL VNCWQIALLT LATGPFIVAA GGISNIFLHR LAENIQDAYG DAASIAEQAI LYIRTLYSFT
0301: NETLAKYSYA TSLQATLRYG ILISLVQGLG LGFTYGLAIC SCALQLWVGR FLISHGRANG GEVVVALFAI ILSGLGLNQA ATNFYSFEQG RIAAYRLYEM
0401: ISRSTSTVNQ DGSTLSSVQG NIEFRNVYFS YLSRPEIPIL SGFYLTVPAR KTVALVGRNG SGKSSIIPLM ERFYDPTLGE VLLDGENIKN LKLEWLRSQI
0501: GLVTQEPALL SLSIMENIAY GRCATTDQIE EAAKTAHVHA FISSLEKGYE TQVGRAGLSL TEEQKIKLSI ARAVLSNPSI LLLDEVTGAL DFEAEKAVQE
0601: ALDILMLGRS TIIIARRLSL IRNADYIAVM EEGQLVEMGT HEELLNLDGL YAELLRCEEA AKLPKRTPMR NYKEPSSFQI ERDSSAGHNF QESSSPKMSK
0701: SPSLQKTHGF LTFRTSDANH NSHESPNIQS PPSEQMAEAR LPMVASERAP SIKRQDSFEM KLPDLPKIDV PLHRQSSNTS DPESPISPLL TSDPKNERSH
0801: SKTFSRPLVI FDSFHAEDSK QQHTKAPSFW RLAELSFAEY FYALLGSAGA ACFGSFNPLL AYTISLIVVA YYKIGVRDVH AEVNKYCSFI VGMGIITVLA
0901: NFLQHFYFGI MGEKMTERVR RMMFSEFSNS VYCIPAILRN EVGWFDDEEN SADILSMRLA NDATFVRAAF SNRLSIFIQD TSAILVALLL GMLLQWRVAL
1001: VALATGIQEM HRKASLVLED AVRNIYTVVA FCAGNKIMEL YRLQLGNILK KSFIHGMGIG FAFGFSQFLL FACNALLLWY TAAAVKDGHL SLVTAVKEYI
1101: VFSFATFALV EPFGLAPYIL KRRKSLTSVF EIIDRVPKID PDDASGLKPP NVYGSIEFRS VEFCYPTRPE MMVLSNFSLR VSGGQTVAVV GVSGSGKSTI
1201: ISLIERFYDP TAGQVLLDGR DLKLFNLRWL RSHMGLVPQD PVIFSTTIRE NIIYARHNAT ESEMKEAARI ANAHHFISSL PHGYDTHVGM RGVDLTPGQK
1301: QRIAIARVVL KNAPILLLDE ASSAIESESS RVVQEALDTL IMGNKTTILI AHRAAMMKHV DSIVVLNGGR IVEQGSHDSL VQLNGLYVKL MQPHFSKGFR
1401: QRRLI
0101: VVYLHLFGKA INSLHAHGRH THDLFHDINQ AIAYALFIPL LTHPHALYFL YIAIGVFFAA WIEVSCWILT GERQTAVIRS KYVQVLLNQD MSFFDTYGNN
0201: GDIVSQVLSD VLLIQSALSE KVGNYIHNMA TFFGGLVIGL VNCWQIALLT LATGPFIVAA GGISNIFLHR LAENIQDAYG DAASIAEQAI LYIRTLYSFT
0301: NETLAKYSYA TSLQATLRYG ILISLVQGLG LGFTYGLAIC SCALQLWVGR FLISHGRANG GEVVVALFAI ILSGLGLNQA ATNFYSFEQG RIAAYRLYEM
0401: ISRSTSTVNQ DGSTLSSVQG NIEFRNVYFS YLSRPEIPIL SGFYLTVPAR KTVALVGRNG SGKSSIIPLM ERFYDPTLGE VLLDGENIKN LKLEWLRSQI
0501: GLVTQEPALL SLSIMENIAY GRCATTDQIE EAAKTAHVHA FISSLEKGYE TQVGRAGLSL TEEQKIKLSI ARAVLSNPSI LLLDEVTGAL DFEAEKAVQE
0601: ALDILMLGRS TIIIARRLSL IRNADYIAVM EEGQLVEMGT HEELLNLDGL YAELLRCEEA AKLPKRTPMR NYKEPSSFQI ERDSSAGHNF QESSSPKMSK
0701: SPSLQKTHGF LTFRTSDANH NSHESPNIQS PPSEQMAEAR LPMVASERAP SIKRQDSFEM KLPDLPKIDV PLHRQSSNTS DPESPISPLL TSDPKNERSH
0801: SKTFSRPLVI FDSFHAEDSK QQHTKAPSFW RLAELSFAEY FYALLGSAGA ACFGSFNPLL AYTISLIVVA YYKIGVRDVH AEVNKYCSFI VGMGIITVLA
0901: NFLQHFYFGI MGEKMTERVR RMMFSEFSNS VYCIPAILRN EVGWFDDEEN SADILSMRLA NDATFVRAAF SNRLSIFIQD TSAILVALLL GMLLQWRVAL
1001: VALATGIQEM HRKASLVLED AVRNIYTVVA FCAGNKIMEL YRLQLGNILK KSFIHGMGIG FAFGFSQFLL FACNALLLWY TAAAVKDGHL SLVTAVKEYI
1101: VFSFATFALV EPFGLAPYIL KRRKSLTSVF EIIDRVPKID PDDASGLKPP NVYGSIEFRS VEFCYPTRPE MMVLSNFSLR VSGGQTVAVV GVSGSGKSTI
1201: ISLIERFYDP TAGQVLLDGR DLKLFNLRWL RSHMGLVPQD PVIFSTTIRE NIIYARHNAT ESEMKEAARI ANAHHFISSL PHGYDTHVGM RGVDLTPGQK
1301: QRIAIARVVL KNAPILLLDE ASSAIESESS RVVQEALDTL IMGNKTTILI AHRAAMMKHV DSIVVLNGGR IVEQGSHDSL VQLNGLYVKL MQPHFSKGFR
1401: QRRLI
0001: MDNDGGAPPP PPTLVVEEPK KAEIRGVAFK ELFRFADGLD YVLMGIGSVG AFVHGCSLPL FLRFFADLVN SFGSNSNNVE KMMEEVLKYA LYFLVVGAAI
0101: WASSWAEISC WMWSGERQTT KMRIKYLEAA LNQDIQFFDT EVRTSDVVFA INTDAVMVQD AISEKLGNFI HYMATFVSGF IVGFTAVWQL ALVTLAVVPL
0201: IAVIGGIHTT TLSKLSNKSQ ESLSQAGNIV EQTVVQIRVV MAFVGESRAS QAYSSALKIA QKLGYKTGLA KGMGLGATYF VVFCCYALLL WYGGYLVRHH
0301: LTNGGLAIAT MFAVMIGGLA LGQSAPSMAA FAKAKVAAAK IFRIIDHKPT IERNSESGVE LDSVTGLVEL KNVDFSYPSR PDVKILNNFC LSVPAGKTIA
0401: LVGSSGSGKS TVVSLIERFY DPNSGQVLLD GQDLKTLKLR WLRQQIGLVS QEPALFATSI KENILLGRPD ADQVEIEEAA RVANAHSFII KLPDGFDTQV
0501: GERGLQLSGG QKQRIAIARA MLKNPAILLL DEATSALDSE SEKLVQEALD RFMIGRTTLI IAHRLSTIRK ADLVAVLQQG SVSEIGTHDE LFSKGENGVY
0601: AKLIKMQEAA HETAMSNARK SSARPSSARN SVSSPIMTRN SSYGRSPYSR RLSDFSTSDF SLSIDASSYP NYRNEKLAFK DQANSFWRLA KMNSPEWKYA
0701: LLGSVGSVIC GSLSAFFAYV LSAVLSVYYN PDHEYMIKQI DKYCYLLIGL SSAALVFNTL QHSFWDIVGE NLTKRVREKM LSAVLKNEMA WFDQEENESA
0801: RIAARLALDA NNVRSAIGDR ISVIVQNTAL MLVACTAGFV LQWRLALVLV AVFPVVVAAT VLQKMFMTGF SGDLEAAHAK GTQLAGEAIA NVRTVAAFNS
0901: EAKIVRLYTA NLEPPLKRCF WKGQIAGSGY GVAQFCLYAS YALGLWYASW LVKHGISDFS KTIRVFMVLM VSANGAAETL TLAPDFIKGG QAMRSVFELL
1001: DRKTEIEPDD PDTTPVPDRL RGEVELKHID FSYPSRPDIQ IFRDLSLRAR AGKTLALVGP SGCGKSSVIS LIQRFYEPSS GRVMIDGKDI RKYNLKAIRK
1101: HIAIVPQEPC LFGTTIYENI AYGHECATEA EIIQAATLAS AHKFISALPE GYKTYVGERG VQLSGGQKQR IAIARALVRK AEIMLLDEAT SALDAESERS
1201: VQEALDQACS GRTSIVVAHR LSTIRNAHVI AVIDDGKVAE QGSHSHLLKN HPDGIYARMI QLQRFTHTQV IGMTSGSSSR VKEDDA
0101: WASSWAEISC WMWSGERQTT KMRIKYLEAA LNQDIQFFDT EVRTSDVVFA INTDAVMVQD AISEKLGNFI HYMATFVSGF IVGFTAVWQL ALVTLAVVPL
0201: IAVIGGIHTT TLSKLSNKSQ ESLSQAGNIV EQTVVQIRVV MAFVGESRAS QAYSSALKIA QKLGYKTGLA KGMGLGATYF VVFCCYALLL WYGGYLVRHH
0301: LTNGGLAIAT MFAVMIGGLA LGQSAPSMAA FAKAKVAAAK IFRIIDHKPT IERNSESGVE LDSVTGLVEL KNVDFSYPSR PDVKILNNFC LSVPAGKTIA
0401: LVGSSGSGKS TVVSLIERFY DPNSGQVLLD GQDLKTLKLR WLRQQIGLVS QEPALFATSI KENILLGRPD ADQVEIEEAA RVANAHSFII KLPDGFDTQV
0501: GERGLQLSGG QKQRIAIARA MLKNPAILLL DEATSALDSE SEKLVQEALD RFMIGRTTLI IAHRLSTIRK ADLVAVLQQG SVSEIGTHDE LFSKGENGVY
0601: AKLIKMQEAA HETAMSNARK SSARPSSARN SVSSPIMTRN SSYGRSPYSR RLSDFSTSDF SLSIDASSYP NYRNEKLAFK DQANSFWRLA KMNSPEWKYA
0701: LLGSVGSVIC GSLSAFFAYV LSAVLSVYYN PDHEYMIKQI DKYCYLLIGL SSAALVFNTL QHSFWDIVGE NLTKRVREKM LSAVLKNEMA WFDQEENESA
0801: RIAARLALDA NNVRSAIGDR ISVIVQNTAL MLVACTAGFV LQWRLALVLV AVFPVVVAAT VLQKMFMTGF SGDLEAAHAK GTQLAGEAIA NVRTVAAFNS
0901: EAKIVRLYTA NLEPPLKRCF WKGQIAGSGY GVAQFCLYAS YALGLWYASW LVKHGISDFS KTIRVFMVLM VSANGAAETL TLAPDFIKGG QAMRSVFELL
1001: DRKTEIEPDD PDTTPVPDRL RGEVELKHID FSYPSRPDIQ IFRDLSLRAR AGKTLALVGP SGCGKSSVIS LIQRFYEPSS GRVMIDGKDI RKYNLKAIRK
1101: HIAIVPQEPC LFGTTIYENI AYGHECATEA EIIQAATLAS AHKFISALPE GYKTYVGERG VQLSGGQKQR IAIARALVRK AEIMLLDEAT SALDAESERS
1201: VQEALDQACS GRTSIVVAHR LSTIRNAHVI AVIDDGKVAE QGSHSHLLKN HPDGIYARMI QLQRFTHTQV IGMTSGSSSR VKEDDA
Arabidopsis Description
ABCB1ABC transporter B family member 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZR72]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.