Factsheet for Zm00001d009448_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0548500-00	Rice	plasma membrane	77.61	77.86
TraesCS1B01G387400.1	Wheat	peroxisome	77.29	77.23
TraesCS1A01G368500.1	Wheat	cytosol, peroxisome, plasma membrane	77.22	77.15
HORVU1Hr1G078450.24	Barley	plasma membrane	77.06	77.0
TraesCS1D01G374300.1	Wheat	cytosol, peroxisome, plasma membrane	77.29	76.99
Zm00001d043762_P001	Maize	cytosol	71.28	70.78
Zm00001d011644_P002	Maize	plasma membrane	64.48	63.42
OQU78384	Sorghum	plasma membrane	91.53	61.35
Zm00001d043766_P005	Maize	cytosol	61.23	60.56
Zm00001d005528_P001	Maize	plasma membrane	57.44	60.35
VIT_10s0003g02540.t01	Wine grape	plasma membrane	57.59	59.14
GSMUA_Achr2P20180_001	Banana	plasma membrane	45.33	58.77
Zm00001d009447_P002	Maize	plasma membrane	58.62	58.62
KRH21125	Soybean	plasma membrane	58.07	58.21
Bra012621.1-P	Field mustard	plasma membrane	56.96	57.74
Zm00001d044564_P008	Maize	cytosol, peroxisome, plasma membrane	60.21	57.52
VIT_10s0003g02570.t01	Wine grape	plasma membrane	56.33	57.47
PGSC0003DMT400007960	Potato	plasma membrane	56.88	56.97
Solyc02g071350.2.1	Tomato	plastid	56.88	56.93
VIT_10s0003g02580.t01	Wine grape	plasma membrane	56.41	56.36
KRH11119	Soybean	plasma membrane	55.54	56.3
AT4G18050.2	Thale cress	plasma membrane	55.46	56.26
Zm00001d008178_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	56.72	56.1
CDY35168	Canola	golgi, peroxisome, plasma membrane	48.26	55.91
Solyc02g071340.1.1	Tomato	plasma membrane	55.38	55.42
VIT_10s0003g02550.t01	Wine grape	cytosol, nucleus, peroxisome	23.81	55.23
PGSC0003DMT400034908	Potato	plasma membrane	54.35	54.57
Solyc03g005860.2.1	Tomato	plasma membrane	53.64	53.85
Zm00001d040562_P002	Maize	cytosol, peroxisome, plasma membrane	56.65	53.63
AT5G46540.1	Thale cress	golgi	52.69	53.37
Bra017539.1-P	Field mustard	plasma membrane	41.06	50.34
Zm00001d053706_P002	Maize	mitochondrion, plasma membrane	41.93	42.64
Zm00001d051514_P002	Maize	mitochondrion	42.09	42.16
Zm00001d025590_P002	Maize	cytosol, nucleus, plasma membrane	42.17	41.87
Zm00001d002119_P006	Maize	cytosol	41.93	41.86
Zm00001d026426_P005	Maize	cytosol	41.93	41.63
Zm00001d016794_P001	Maize	plasma membrane	40.11	40.37
Zm00001d031871_P001	Maize	cytosol	40.82	36.44
Zm00001d024600_P002	Maize	peroxisome	36.08	36.1
Zm00001d049565_P001	Maize	peroxisome	35.68	35.68
Zm00001d041947_P001	Maize	cytosol, peroxisome, plasma membrane	38.05	34.23
Zm00001d047780_P002	Maize	plasma membrane	38.21	34.18
Zm00001d028671_P002	Maize	cytosol, plasma membrane, vacuole	37.58	33.95
Zm00001d004442_P001	Maize	plastid	36.87	30.72

Protein Annotations

Gene3D:1.20.1560.10	MapMan:24.1.3.1.1	Gene3D:3.40.50.300	UniProt:A0A1D6FJH6	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom
InterPro:ABC1_TM_sf	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	ProteinID:AQK91914.1	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	InterPro:IPR011527	InterPro:IPR036640	InterPro:P-loop_NTPase
PFAM:PF00005	PFAM:PF00664	ScanProsite:PS00211	PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24221
PANTHER:PTHR24221:SF275	SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF90123	TMHMM:TMhelix	UniParc:UPI00084348C6
EnsemblPlantsGene:Zm00001d009448	EnsemblPlants:Zm00001d009448_P001	EnsemblPlants:Zm00001d009448_T001	SEG:seg	:	:

Description

ABC transporter B family member 9

Coordinates

chr8:+:64890259..64903252

Molecular Weight (calculated)

136600.0 Da

IEP (calculated)

7.544

GRAVY (calculated)

0.127

Length

1264 amino acids

Sequence
(BLAST)

0001: MAEESVVKAS AGDAVKGGKV EESGEKMVTM AKVPFHSMFK CADRTDVLLM LAGMVGALGN GMSMVVMTII FGQMVDAFGG ATPDTIVPRV SKAALNFIYL
0101: AIGTGFTSFI QISCWTMTGE RQATRIRSLY LKSVLRQDMP FFDVEMTTGQ VVSSISADMT LIQGAIGEKV GKFVQLITTF FGGFVLAFIK GWLLTLVMLS
0201: TIPPFVVAAG IVAKMISKIS SEGLASYSDA GDTVEQTIGS IRTVASFNGE KKAIALYNNF IKKAYNGAVK EGIVQGFGMG LLSFIYFSAF GLIIWYGSKL
0301: SLTKGYSGAD ILNVMFAIMI GARNLGDATP CIASFEEGRV AAYRLFKTIK RRPEIDYGDN TGIVLEDIKG EVELKDVFFS YPSRPDQLIF DRFSVHVSSG
0401: TTMAIVGESG SGKSTVINLV ERFYDPQAGE VLIDGMNIKG FKLEWIRGKI GLVNQEPVLF MTSIRENITY GKEDATLEEI KKAAELANAG FIENLPNGYD
0501: TTVGQRGAQL SGGQKQRIAI ARAILKDPKI LLLDEATSAL DLESERIVQD ALNRIMLGRT TLVVAHRLST VRKAHCISVV SKGKLVEQGH HDDLVKDPNG
0601: AYSQLIRLQE KQQENGRTSD ARLSGSASKR SVSLRRSISR SSAGSSRHSL NLPLGVPGPT ELLEYNFGQG DRQIENTDSK VPNKAPMGRL INLNKPEVAV
0701: LLFGSIVAAI DGAIFPTLGL AMASASKIFY ESPDQQRKDS ILWALLCVGL GAIAMISKII NSFLFAIAGG KLIERIRALT FQSIVHQEVA WFDHPENSSG
0801: ALNGRLSIDA LNVRRLVGDN LALLVQSTAT LTCGIVIAMV ADWKLSLVIL FVIPLVGLQG YAQVNFLRGF SQDAKIMYEE ASQVATEAVG SIRTVASFCA
0901: EKRVMDKYDQ KCQASRDQGI RTGIVGGLGF GFSYLMLYSS SALCYYVGAK FVSQGKSTFG DVFKAYFALV MAMIGVSQTN AMASDSAKAN DSAISIFSIL
1001: DRKSLIDSSS EEGSTLENVK GDIDFKHVGF KYPSRPDVQI FTDFTLTIPS GKTVALVGQS GCGKSTVISL LERFYEPDNG SILLDRVEIS SLKVSWLRDQ
1101: MGLVSQEPVL FSGTIRDNIA YGKHEEVTEE DIVTAARAAN AHEFISSMPQ GYNTTVGERG TQLSGGQKQR IAIARAILKD PRILLLDEAT SALDAESERI
1201: VQDALNGAMV GRTTVIVAHR LSTIQGADMI AVLKDGTIVE KGSHEMLMGI AGGAYASLVE LRTM

Best Arabidopsis Sequence Match ( AT1G02520.1 )
(BLAST)

0001: MNGDGAREGD SVSHEPSTSK SPKEGEETKK EEKSEEKANT VPFYKLFAFA DSSDVLLMIC GSIGAIGNGM SLPFMTLLFG DLIDSFGKNQ NNKDIVDVVS
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN

Arabidopsis Description

ABCB11ABC transporter B family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX7]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.