Factsheet for VIT_10s0003g02580.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0003g02570.t01	Wine grape	plasma membrane	74.07	75.63
VIT_10s0003g02540.t01	Wine grape	plasma membrane	73.44	75.47
VIT_10s0003g02550.t01	Wine grape	cytosol, nucleus, peroxisome	30.67	71.19
TraesCS6B01G145800.1	Wheat	cytosol	14.07	70.36
Os01t0695800-01	Rice	plasma membrane	14.39	69.47
Solyc02g071350.2.1	Tomato	plastid	69.09	69.2
Bra012621.1-P	Field mustard	plasma membrane	67.98	68.97
PGSC0003DMT400007960	Potato	plasma membrane	68.77	68.94
KRH21125	Soybean	plasma membrane	68.22	68.44
KRH11119	Soybean	plasma membrane	67.19	68.16
AT4G18050.2	Thale cress	plasma membrane	66.4	67.42
CDY35168	Canola	golgi, peroxisome, plasma membrane	56.6	65.63
Solyc02g071340.1.1	Tomato	plasma membrane	64.51	64.61
AT5G46540.1	Thale cress	golgi	62.92	63.78
PGSC0003DMT400034908	Potato	plasma membrane	62.21	62.51
Os05t0548300-01	Rice	plasma membrane	28.7	62.37
Solyc03g005860.2.1	Tomato	plasma membrane	61.82	62.11
GSMUA_Achr2P20180_001	Banana	plasma membrane	47.75	61.95
HORVU3Hr1G021600.2	Barley	peroxisome, plasma membrane, vacuole	56.13	61.69
VIT_07s0005g02660.t01	Wine grape	cytosol, peroxisome, plasma membrane	62.92	61.37
TraesCS3A01G117600.3	Wheat	peroxisome, plasma membrane	56.21	61.19
Bra017539.1-P	Field mustard	plasma membrane	49.64	60.91
VIT_05s0020g00890.t01	Wine grape	cytosol, peroxisome, plasma membrane	62.13	60.74
TraesCS6D01G107600.1	Wheat	cytosol, plasma membrane, vacuole	43.64	60.73
TraesCS3D01G257500.1	Wheat	plasma membrane	60.0	60.43
TraesCS3A01G257500.1	Wheat	plasma membrane	59.92	60.3
TraesCS3B01G290300.2	Wheat	peroxisome	60.0	59.91
TraesCS3B01G136800.1	Wheat	golgi, mitochondrion, peroxisome, plasma membrane, plastid	59.21	59.73
Zm00001d043762_P001	Maize	cytosol	59.6	59.23
KXG33192	Sorghum	cytosol	59.37	59.18
HORVU2Hr1G001630.2	Barley	plasma membrane	58.66	59.12
HORVU2Hr1G001530.10	Barley	plasma membrane	58.66	59.12
TraesCS3D01G257900.1	Wheat	peroxisome	58.5	58.64
TraesCS3D01G258100.1	Wheat	plasma membrane	57.71	58.4
TraesCS2B01G012300.1	Wheat	plasma membrane	57.94	58.27
TraesCS3A01G258200.1	Wheat	peroxisome	57.55	58.24
TraesCS2A01G009900.1	Wheat	plasma membrane	57.79	58.11
TraesCS2D01G010500.1	Wheat	plasma membrane	57.39	57.71
Os05t0548500-00	Rice	plasma membrane	57.39	57.62
HORVU3Hr1G065280.1	Barley	plasma membrane	57.47	57.61
HORVU3Hr1G065320.47	Barley	plasma membrane	57.87	57.5
KXG35311	Sorghum	plasma membrane	57.0	57.45
TraesCS3B01G401600.3	Wheat	cytosol, peroxisome, plasma membrane	58.02	57.43
TraesCS3D01G362700.1	Wheat	cytosol, peroxisome, plasma membrane	58.02	57.39
TraesCS3A01G369700.1	Wheat	peroxisome	57.94	57.27
TraesCS2B01G012100.3	Wheat	plasma membrane	56.68	57.22
TraesCS2A01G009600.1	Wheat	plasma membrane	56.6	57.14
TraesCS2B01G012200.1	Wheat	golgi	48.7	57.09
TraesCS2D01G010400.1	Wheat	plasma membrane	56.52	57.06
TraesCS6B01G145600.1	Wheat	peroxisome	57.0	57.04
HORVU6Hr1G021320.43	Barley	peroxisome	57.0	57.0
Os01t0534700-00	Rice	plasma membrane	49.72	56.87
KXG32655	Sorghum	peroxisome	58.02	56.86
Zm00001d009447_P002	Maize	plasma membrane	56.52	56.57
Zm00001d009448_P001	Maize	cytosol, peroxisome, plasma membrane	56.36	56.41
Zm00001d005528_P001	Maize	plasma membrane	53.6	56.36
Zm00001d011644_P002	Maize	plasma membrane	57.0	56.11
Os01t0533900-01	Rice	endoplasmic reticulum, vacuole	36.92	55.93
TraesCS3D01G258200.2	Wheat	peroxisome	55.41	55.68
Zm00001d044564_P008	Maize	cytosol, peroxisome, plasma membrane	58.1	55.56
TraesCS3B01G291100.3	Wheat	peroxisome	55.41	55.46
TraesCS1A01G368500.1	Wheat	cytosol, peroxisome, plasma membrane	55.41	55.41
Os01t0695700-00	Rice	plasma membrane	55.49	55.41
TraesCS3D01G258300.1	Wheat	cytosol, peroxisome, plasma membrane	55.34	55.34
TraesCS1B01G387400.1	Wheat	peroxisome	55.34	55.34
TraesCS3B01G291000.1	Wheat	peroxisome	55.02	55.33
TraesCS1D01G374300.1	Wheat	cytosol, peroxisome, plasma membrane	55.41	55.24
TraesCS3A01G258000.1	Wheat	mitochondrion	57.87	55.2
TraesCS3A01G258400.3	Wheat	peroxisome	54.86	55.17
TraesCS3B01G290700.1	Wheat	peroxisome	45.69	55.15
EES01319	Sorghum	cytosol	55.41	55.02
HORVU1Hr1G078450.24	Barley	plasma membrane	54.94	54.94
Zm00001d043766_P005	Maize	cytosol	55.1	54.54
HORVU3Hr1G065240.14	Barley	cytosol	55.18	54.53
TraesCS5A01G495900.1	Wheat	plasma membrane	54.55	54.46
Os02t0323000-01	Rice	cytosol, peroxisome	17.15	51.3
VIT_14s0108g00430.t01	Wine grape	cytosol, peroxisome, plasma membrane	42.53	43.04
VIT_14s0066g02320.t01	Wine grape	peroxisome	39.13	42.78
VIT_02s0012g01660.t01	Wine grape	plasma membrane	41.9	42.64
VIT_18s0001g14660.t01	Wine grape	peroxisome, plasma membrane, vacuole	40.24	41.72
VIT_19s0085g00060.t01	Wine grape	endoplasmic reticulum, plasma membrane, plastid	39.6	40.9
VIT_11s0016g03160.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	38.34	39.59
VIT_01s0137g00350.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	38.97	39.38
VIT_08s0007g05060.t01	Wine grape	cytosol, peroxisome, plasma membrane	41.82	39.07
OQU78384	Sorghum	plasma membrane	57.63	38.65
VIT_16s0098g00570.t01	Wine grape	cytosol, plasma membrane, vacuole	35.41	37.71
VIT_17s0000g09760.t01	Wine grape	plasma membrane	35.34	37.34
VIT_13s0019g00310.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	35.26	34.31
VIT_06s0004g04100.t01	Wine grape	cytosol	37.15	33.45
VIT_09s0002g00750.t01	Wine grape	peroxisome, plastid	38.42	30.82

Protein Annotations

Gene3D:1.20.1560.10	EntrezGene:100265902	wikigene:100265902	MapMan:24.1.3.1.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase
InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EMBL:AM473950	ProteinID:CAN66101
ProteinID:CAN66101.1	ProteinID:CCB55753	ProteinID:CCB55753.1	UniProt:F6HMG4	EMBL:FN595992	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	InterPro:IPR011527	InterPro:IPR036640	EntrezGene:LOC100265902
wikigene:LOC100265902	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664	ScanProsite:PS00211	PFscan:PS50893
PFscan:PS50929	PANTHER:PTHR24221	PANTHER:PTHR24221:SF398	SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF90123
TMHMM:TMhelix	UniParc:UPI00019858C7	ArrayExpress:VIT_10s0003g02580	EnsemblPlantsGene:VIT_10s0003g02580	EnsemblPlants:VIT_10s0003g02580.t01	RefSeq:XP_002271305
RefSeq:XP_002271305.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr10:+:4537656..4542843

Molecular Weight (calculated)

136905.0 Da

IEP (calculated)

7.327

GRAVY (calculated)

0.124

Length

1265 amino acids

Sequence
(BLAST)

0001: MNGEGGETSK RDEISQQKVA FYRLFSFADG LDIVLMTVGT LGAIADGFTQ PLMTLMMGRA IHSFATSDPS HVVHQVSKVS LMFLYLAAGS GLAAFIQSSS
0101: WRVTGARQAN SIRSLYLKTI LRQDIEFFDT ETTAGEVIGR LSGDTILIED AMGEKVGKFL QNMSTFVAGF TIAFLKGWRL VLVLLPTIPL VVMAGATMAM
0201: MMSKMSSHGQ VAYAEAGAVV EETVGAIRTV ASFTGEKHAI ENYNKKLKVA YTSTVQQGLA SGFAVGAVVV IVFSSYGLAI WYGSKLIIEE GYNGGTVVNV
0301: LLSLMVGGSS LGQASPCLSA FTAGQAAAYK MFETIKRKPK IDTYDTSGIV LEEIRGEIEL KDVYFKYPSR PDVQIFGGFS LHIPSRTTAA LVGQSGSGKS
0401: TVISLLERFY DPEAGEVLID GVNLKKLNIR SIREKIGLVS QEPILFAGTI KENISYGKKD ATNEEIRAAI ELSNSARFIN KLQRGLDTMV GEHGTQLSGG
0501: QKQRIAIARA ILKNPRILLL DEATSALDAQ SERIVQDALL NIMADRTTVV VAHRLTTIRN ADVIAVVHQG KIVEQGTHVE LIRDPNGAYS QLVRLQEGTN
0601: QAADAQKVDK ICERENTQKR SRTRSLSYKS VSMDSSSSHH SYSLSFGLPV PIGMDEIEVG REETTQQGEA ENEKSPKVPL RRLAYLNKPE VPVLLLGTIA
0701: AAVHGLVFPM FAFLLSTAVK IFYEPPNQLQ KDSKFWALFF VGLGVLALIV GPLQNFLFGV AGGKLIERIR SLSFEKVVHQ EITWFDHPGN SSGAVGARLS
0801: TDASTVRGLV GDALALLVQN LTTIIVGLII SFTANWILAL IILGVMPLLG FEGFVQGKFL KGFSAEAKVM YEEASHIVNE ALGSIRTVAS FCAEEKVMEM
0901: YEQKCEATVK QGIRIGLVSG IGFGSSALAL HCTNALVFYI GAILVEHGKA TFPQLFKVFF ALTISAVGLS HASAMAPETT KAKDSAASIF HLLDSKPKID
1001: SSIKEGTTLS TVKGDIELQH VSFKYPTRPD VQIFRDLCFS IPSGKAVALV GESGSGKSTV ISLIERFYNP DSGAILLDGM EIHKFKLSWL RQQMGLVGQE
1101: PILFNETIRA NIAYGKQGNA SEDEIIAATR TANAHDFISA LPQGYETTVG ERGMQLSGGQ KQRIAIARAI IKDPKILLLD EATSALDAES ERVVQEALDR
1201: VMVHRTTVVV AHCLTTIRGA DMIAVVKNGV IAEMGRHDKL MKIADGAYAS MVALHMSSSK GEEQE

Best Arabidopsis Sequence Match ( AT4G18050.2 )
(BLAST)

0001: MKKEEERKER MEEKSSKKND GGNQKVSFFK LFSFADKTDV VLMTVGTIAA AGNGLTQPFM TLIFGQLINA FGTTDPDHMV REVWKVAVKF IYLAVYSCVV
0101: AFLQVSCWMV TGERQSATIR GLYLKTILRQ DIGYFDTETN TGEVIGRMSG DTILIQDAMG EKVGKFTQLL CTFLGGFAIA FYKGPLLAGV LCSCIPLIVI
0201: AGAAMSLIMS KMAGRGQVAY AEAGNVVEQT VGAIRTVVAF TGEKQATEKY ESKLEIAYKT VVQQGLISGF GLGTMLAVIF CSYGLAVWYG AKLIMEKGYN
0301: GGQVINVIFA VLTGGMSLGQ TSPSLNAFAA GRAAAFKMFE TIKRSPKIDA YDMSGSVLED IRGDIELKDV YFRYPARPDV QIFAGFSLFV PNGKTVALVG
0401: QSGSGKSTVI SLIERFYDPE SGQVLIDNID LKKLQLKWIR SKIGLVSQEP VLFATTIKEN IAYGKEDATD QEIRTAIELA NAAKFIDKLP QGLDTMVGEH
0501: GTQMSGGQKQ RLAIARAILK NPKILLLDEA TSALDAESER IVQDALVNLM SNRTTVVVAH RLTTIRTADV IAVVHQGKIV EKGTHDEMIQ DPEGAYSQLV
0601: RLQEGSKEEA TESERPETSL DVERSGSLRL SSAMRRSVSR NSSSSRHSFS LASNMFFPGV NVNQTDEMED EENNVRHKKV SLKRLAHLNK PEIPVLVLGS
0701: IAAMVHGTVF PIFGLLLSSS INMFYEPAKI LKKDSHFWAL IYIALGLTNF VMIPVQNYFF GIAGGKLIKR IRSMCFDKVV HQEISWFDDT ANSRSLVGDA
0801: LALIVQNIAT VTTGLIIAFT ANWILALIVL ALSPFIVIQG YAQTKFLTGF SADAKAMYEE ASQVANDAVS SIRTVASFCA EEKVMDLYQQ KCDGPKKNGV
0901: RLGLLSGAGF GFSFFFLYCI NCVCFVSGAG LIQIGKATFG EVFKVFFALT IMAIGVSQTS AMAPDSNKAK DSAASIFDIL DSTPKIDSSS DEGTTLQNVN
1001: GDIEFRHVSF RYPMRPDVQI FRDLCLTIPS GKTVALVGES GSGKSTVISM IERFYNPDSG KILIDQVEIQ TFKLSWLRQQ MGLVSQEPIL FNETIRSNIA
1101: YGKTGGATEE EIIAAAKAAN AHNFISSLPQ GYDTSVGERG VQLSGGQKQR IAIARAILKD PKILLLDEAT SALDAESERV VQDALDRVMV NRTTVVVAHR
1201: LTTIKNADVI AVVKNGVIAE KGRHETLMKI SGGAYASLVT LHMSAN

Arabidopsis Description

PGP9P-glycoprotein 9 [Source:TAIR;Acc:AT4G18050]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.