Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0695800-01 | Rice | plasma membrane | 89.33 | 86.26 |
| TraesCS6D01G107600.1 | Wheat | cytosol, plasma membrane, vacuole | 98.02 | 27.28 |
| HORVU6Hr1G021320.43 | Barley | peroxisome | 97.23 | 19.45 |
| TraesCS6B01G145600.1 | Wheat | peroxisome | 96.84 | 19.38 |
| TraesCS2B01G012200.1 | Wheat | golgi | 73.12 | 17.15 |
| Zm00001d011644_P002 | Maize | plasma membrane | 85.77 | 16.89 |
| TraesCS3B01G290300.2 | Wheat | peroxisome | 81.82 | 16.34 |
| TraesCS3B01G291100.3 | Wheat | peroxisome | 79.84 | 15.98 |
| TraesCS2B01G012100.3 | Wheat | plasma membrane | 78.26 | 15.8 |
| TraesCS3B01G291000.1 | Wheat | peroxisome | 78.26 | 15.74 |
| CDY35168 | Canola | golgi, peroxisome, plasma membrane | 67.59 | 15.67 |
| TraesCS1B01G387400.1 | Wheat | peroxisome | 78.26 | 15.65 |
| TraesCS2B01G012300.1 | Wheat | plasma membrane | 77.08 | 15.5 |
| VIT_10s0003g02540.t01 | Wine grape | plasma membrane | 75.1 | 15.43 |
| GSMUA_Achr2P20180_001 | Banana | plasma membrane | 58.89 | 15.28 |
| AT4G18050.2 | Thale cress | plasma membrane | 74.31 | 15.09 |
| Bra012621.1-P | Field mustard | plasma membrane | 73.91 | 15.0 |
| VIT_10s0003g02570.t01 | Wine grape | plasma membrane | 73.12 | 14.93 |
| Solyc02g071350.2.1 | Tomato | plastid | 74.31 | 14.89 |
| PGSC0003DMT400007960 | Potato | plasma membrane | 73.91 | 14.82 |
| AT5G46540.1 | Thale cress | golgi | 72.33 | 14.66 |
| TraesCS3B01G136800.1 | Wheat | golgi, mitochondrion, peroxisome, plasma membrane, plastid | 72.33 | 14.59 |
| Solyc02g071340.1.1 | Tomato | plasma membrane | 72.73 | 14.57 |
| TraesCS3B01G401600.3 | Wheat | cytosol, peroxisome, plasma membrane | 73.52 | 14.55 |
| Solyc03g005860.2.1 | Tomato | plasma membrane | 71.15 | 14.3 |
| PGSC0003DMT400034908 | Potato | plasma membrane | 70.75 | 14.22 |
| KRH11119 | Soybean | plasma membrane | 69.96 | 14.19 |
| KRH21125 | Soybean | plasma membrane | 70.36 | 14.12 |
| VIT_10s0003g02580.t01 | Wine grape | plasma membrane | 70.36 | 14.07 |
| TraesCS1B01G099000.1 | Wheat | cytosol, peroxisome, plasma membrane | 68.77 | 13.65 |
| TraesCS6B01G291900.1 | Wheat | peroxisome | 59.29 | 11.88 |
| TraesCS2B01G550700.2 | Wheat | plasma membrane | 57.31 | 11.54 |
| TraesCS2B01G341800.2 | Wheat | cytosol, peroxisome, plasma membrane | 56.92 | 11.39 |
| TraesCS2B01G358200.1 | Wheat | plasma membrane | 53.75 | 10.75 |
| TraesCS6B01G170700.1 | Wheat | plasma membrane | 52.96 | 10.69 |
| TraesCS7B01G203400.1 | Wheat | peroxisome | 52.96 | 10.65 |
| TraesCS7B01G203300.1 | Wheat | peroxisome | 52.57 | 10.52 |
| TraesCS4B01G298100.1 | Wheat | mitochondrion, plasma membrane | 52.17 | 10.05 |
| TraesCS7B01G181700.1 | Wheat | cytosol | 52.17 | 9.65 |
| TraesCS4B01G203000.1 | Wheat | cytosol, plasma membrane, plastid | 51.78 | 9.3 |
| TraesCS3B01G607600.1 | Wheat | cytosol, plasma membrane, vacuole | 50.2 | 9.01 |
| TraesCS3B01G290700.1 | Wheat | peroxisome | 14.23 | 3.44 |
| Bra017539.1-P | Field mustard | plasma membrane | 10.67 | 2.62 |
| VIT_10s0003g02550.t01 | Wine grape | cytosol, nucleus, peroxisome | 4.74 | 2.2 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:AAA+_ATPase | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0016787 | GO:GO:0016887 |
| InterPro:IPR003439 | InterPro:P-loop_NTPase | PFAM:PF00005 | ScanProsite:PS00211 | PFscan:PS50893 | PANTHER:PTHR24221 |
| PANTHER:PTHR24221:SF272 | SMART:SM00382 | SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS6B01G145800 | EnsemblPlants:TraesCS6B01G145800.1 | TIGR:cd03249 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr6B:+:145898701..145899700
Molecular Weight (calculated)
27528.0 Da
IEP (calculated)
5.411
GRAVY (calculated)
-0.119
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MMLENVTGDI EFSNVSFKYP SRPDVQIFSD FTLHIPSRKT IALVGESGSG KSTIISLLER FYDPDSGSIS VDGVEIKSLK ISWLRDQMGL VGQEPVLFND
101: TIRANITYGK HGEVTEEEVT GVAKAANAHE FISSLPQGYD TLVGEKGVQL SGGQKQRVAI ARAIIKDPKI LLLDEATSAL DAESERIVQD ALDRVMVSRT
201: TIVVAHRLST IKGADAIAVL KEGKIAEKGN HEALMRIQDG VYASLVELRS NSK
101: TIRANITYGK HGEVTEEEVT GVAKAANAHE FISSLPQGYD TLVGEKGVQL SGGQKQRVAI ARAIIKDPKI LLLDEATSAL DAESERIVQD ALDRVMVSRT
201: TIVVAHRLST IKGADAIAVL KEGKIAEKGN HEALMRIQDG VYASLVELRS NSK
0001: MDSVIESEEG LKVDSPNRAD AETSNSKIHE EDEKELKTES DLKEEKKKTE KNKQEEDEKT KTVPFHKLFA FADSFDIILM ILGTIGAVGN GLGFPIMTIL
0101: FGDVIDVFGQ NQNSSDVSDK IAKVALKFVY LGLGTLVAAL LQVSGWMISG ERQAGRIRSL YLQTILRQDI AFFDVETNTG EVVGRMSGDT VLIQDAMGEK
0201: VGKAIQLVST FIGGFVIAFT EGWLLTLVMV SSIPLLVMSG AALAIVISKM ASRGQTSYAK AAVVVEQTVG SIRTVASFTG EKQAISNYNK HLVSAYRAGV
0301: FEGASTGLGL GTLNIVIFCT YALAVWYGGK MILEKGYTGG QVLIIIFAVL TGSMSLGQAS PCLSAFAAGQ AAAYKMFEAI KRKPEIDASD TTGKVLDDIR
0401: GDIELNNVNF SYPARPEEQI FRGFSLSISS GSTVALVGQS GSGKSTVVSL IERFYDPQSG EVRIDGINLK EFQLKWIRSK IGLVSQEPVL FTSSIKENIA
0501: YGKENATVEE IRKATELANA SKFIDKLPQG LDTMVGEHGT QLSGGQKQRI AVARAILKDP RILLLDEATS ALDAESERIV QEALDRIMVN RTTVVVAHRL
0601: STVRNADMIA VIHQGKIVEK GSHSELLRDP EGAYSQLIRL QEDTKQTEDS TDEQKLSMES MKRSSLRKSS LSRSLSKRSS SFSMFGFPAG IDTNNEAIPE
0701: KDIKVSTPIK EKKVSFFRVA ALNKPEIPML ILGSIAAVLN GVILPIFGIL ISSVIKAFFK PPEQLKSDTR FWAIIFMLLG VASMVVFPAQ TIFFSIAGCK
0801: LVQRIRSMCF EKVVRMEVGW FDETENSSGA IGARLSADAA TVRGLVGDAL AQTVQNLASV TAGLVIAFVA SWQLAFIVLA MLPLIGLNGY IYMKFMVGFS
0901: ADAKRMYEEA SQVANDAVGS IRTVASFCAE EKVMKMYKKK CEGPMRTGIR QGIVSGIGFG VSFFVLFSSY AASFYAGARL VDDGKTTFDS VFRVFFALTM
1001: AAVAISQSSS LSPDSSKASN AAASIFAVID RESKIDPSDE SGRVLDNVKG DIELRHISFK YPSRPDVQIF QDLCLSIRAG KTIALVGESG SGKSTVIALL
1101: QRFYDPDSGQ ITLDGVEIKT LQLKWLRQQT GLVSQEPVLF NETIRANIAY GKGGDATETE IVSAAELSNA HGFISGLQQG YDTMVGERGV QLSGGQKQRV
1201: AIARAIVKDP KVLLLDEATS ALDAESERVV QDALDRVMVN RTTVVVAHRL STIKNADVIA VVKNGVIVEK GKHETLINIK DGVYASLVQL HLSAST
0101: FGDVIDVFGQ NQNSSDVSDK IAKVALKFVY LGLGTLVAAL LQVSGWMISG ERQAGRIRSL YLQTILRQDI AFFDVETNTG EVVGRMSGDT VLIQDAMGEK
0201: VGKAIQLVST FIGGFVIAFT EGWLLTLVMV SSIPLLVMSG AALAIVISKM ASRGQTSYAK AAVVVEQTVG SIRTVASFTG EKQAISNYNK HLVSAYRAGV
0301: FEGASTGLGL GTLNIVIFCT YALAVWYGGK MILEKGYTGG QVLIIIFAVL TGSMSLGQAS PCLSAFAAGQ AAAYKMFEAI KRKPEIDASD TTGKVLDDIR
0401: GDIELNNVNF SYPARPEEQI FRGFSLSISS GSTVALVGQS GSGKSTVVSL IERFYDPQSG EVRIDGINLK EFQLKWIRSK IGLVSQEPVL FTSSIKENIA
0501: YGKENATVEE IRKATELANA SKFIDKLPQG LDTMVGEHGT QLSGGQKQRI AVARAILKDP RILLLDEATS ALDAESERIV QEALDRIMVN RTTVVVAHRL
0601: STVRNADMIA VIHQGKIVEK GSHSELLRDP EGAYSQLIRL QEDTKQTEDS TDEQKLSMES MKRSSLRKSS LSRSLSKRSS SFSMFGFPAG IDTNNEAIPE
0701: KDIKVSTPIK EKKVSFFRVA ALNKPEIPML ILGSIAAVLN GVILPIFGIL ISSVIKAFFK PPEQLKSDTR FWAIIFMLLG VASMVVFPAQ TIFFSIAGCK
0801: LVQRIRSMCF EKVVRMEVGW FDETENSSGA IGARLSADAA TVRGLVGDAL AQTVQNLASV TAGLVIAFVA SWQLAFIVLA MLPLIGLNGY IYMKFMVGFS
0901: ADAKRMYEEA SQVANDAVGS IRTVASFCAE EKVMKMYKKK CEGPMRTGIR QGIVSGIGFG VSFFVLFSSY AASFYAGARL VDDGKTTFDS VFRVFFALTM
1001: AAVAISQSSS LSPDSSKASN AAASIFAVID RESKIDPSDE SGRVLDNVKG DIELRHISFK YPSRPDVQIF QDLCLSIRAG KTIALVGESG SGKSTVIALL
1101: QRFYDPDSGQ ITLDGVEIKT LQLKWLRQQT GLVSQEPVLF NETIRANIAY GKGGDATETE IVSAAELSNA HGFISGLQQG YDTMVGERGV QLSGGQKQRV
1201: AIARAIVKDP KVLLLDEATS ALDAESERVV QDALDRVMVN RTTVVVAHRL STIKNADVIA VVKNGVIVEK GKHETLINIK DGVYASLVQL HLSAST
Arabidopsis Description
ABCB21ABC transporter B family member 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1Q9]
SUBAcon: [plasma membrane,nucleus,cytosol]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.