Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G258300.1 | Wheat | cytosol, peroxisome, plasma membrane | 98.1 | 98.02 |
| TraesCS3A01G258400.3 | Wheat | peroxisome | 97.15 | 97.62 |
| HORVU3Hr1G065240.14 | Barley | cytosol | 94.86 | 93.67 |
| TraesCS3B01G291000.1 | Wheat | peroxisome | 86.79 | 87.2 |
| EES01319 | Sorghum | cytosol | 82.36 | 81.71 |
| Os01t0695700-00 | Rice | plasma membrane | 80.93 | 80.74 |
| TraesCS6B01G145800.1 | Wheat | cytosol | 15.98 | 79.84 |
| Zm00001d043766_P005 | Maize | cytosol | 79.91 | 79.03 |
| TraesCS3B01G290300.2 | Wheat | peroxisome | 68.12 | 67.96 |
| TraesCS6B01G145600.1 | Wheat | peroxisome | 67.25 | 67.25 |
| TraesCS3B01G290700.1 | Wheat | peroxisome | 54.98 | 66.32 |
| TraesCS2B01G012300.1 | Wheat | plasma membrane | 65.43 | 65.74 |
| TraesCS2B01G012200.1 | Wheat | golgi | 55.06 | 64.5 |
| TraesCS2B01G012100.3 | Wheat | plasma membrane | 63.77 | 64.33 |
| TraesCS1B01G387400.1 | Wheat | peroxisome | 61.95 | 61.9 |
| TraesCS3B01G401600.3 | Wheat | cytosol, peroxisome, plasma membrane | 59.18 | 58.53 |
| VIT_10s0003g02540.t01 | Wine grape | plasma membrane | 56.96 | 58.49 |
| KRH11119 | Soybean | plasma membrane | 57.04 | 57.82 |
| Bra012621.1-P | Field mustard | plasma membrane | 57.04 | 57.82 |
| GSMUA_Achr2P20180_001 | Banana | plasma membrane | 44.22 | 57.33 |
| VIT_10s0003g02570.t01 | Wine grape | plasma membrane | 56.01 | 57.14 |
| CDY35168 | Canola | golgi, peroxisome, plasma membrane | 48.97 | 56.74 |
| VIT_10s0003g02550.t01 | Wine grape | cytosol, nucleus, peroxisome | 24.37 | 56.51 |
| TraesCS3B01G136800.1 | Wheat | golgi, mitochondrion, peroxisome, plasma membrane, plastid | 56.01 | 56.46 |
| AT4G18050.2 | Thale cress | plasma membrane | 55.54 | 56.34 |
| KRH21125 | Soybean | plasma membrane | 56.17 | 56.3 |
| VIT_10s0003g02580.t01 | Wine grape | plasma membrane | 55.46 | 55.41 |
| Solyc02g071350.2.1 | Tomato | plastid | 55.06 | 55.11 |
| PGSC0003DMT400007960 | Potato | plasma membrane | 54.98 | 55.07 |
| Solyc02g071340.1.1 | Tomato | plasma membrane | 53.96 | 54.0 |
| TraesCS1B01G099000.1 | Wheat | cytosol, peroxisome, plasma membrane | 54.19 | 53.73 |
| AT5G46540.1 | Thale cress | golgi | 52.85 | 53.53 |
| PGSC0003DMT400034908 | Potato | plasma membrane | 52.53 | 52.74 |
| Solyc03g005860.2.1 | Tomato | plasma membrane | 52.14 | 52.34 |
| Bra017539.1-P | Field mustard | plasma membrane | 40.35 | 49.47 |
| TraesCS2B01G550700.2 | Wheat | plasma membrane | 41.38 | 41.61 |
| TraesCS6B01G291900.1 | Wheat | peroxisome | 41.14 | 41.17 |
| TraesCS2B01G341800.2 | Wheat | cytosol, peroxisome, plasma membrane | 41.14 | 41.14 |
| TraesCS2B01G358200.1 | Wheat | plasma membrane | 37.9 | 37.87 |
| TraesCS7B01G181700.1 | Wheat | cytosol | 40.35 | 37.28 |
| TraesCS7B01G203400.1 | Wheat | peroxisome | 36.0 | 36.17 |
| TraesCS6B01G170700.1 | Wheat | plasma membrane | 35.76 | 36.04 |
| TraesCS4B01G298100.1 | Wheat | mitochondrion, plasma membrane | 37.34 | 35.92 |
| TraesCS7B01G203300.1 | Wheat | peroxisome | 35.36 | 35.36 |
| TraesCS3B01G607600.1 | Wheat | cytosol, plasma membrane, vacuole | 37.26 | 33.4 |
| TraesCS4B01G203000.1 | Wheat | cytosol, plasma membrane, plastid | 36.63 | 32.86 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 |
| InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 |
| PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF238 | SMART:SM00382 | SUPFAM:SSF52540 |
| SUPFAM:SSF90123 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3B01G291100 | EnsemblPlants:TraesCS3B01G291100.3 | TIGR:cd03249 | SEG:seg |
Description
No Description!
Coordinates
chr3B:-:466625748..466632983
Molecular Weight (calculated)
137250.0 Da
IEP (calculated)
7.851
GRAVY (calculated)
0.123
Length
1264 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGDEAMRDRG EEEETGATKR KDAGATKKVA FFGMFRYATR ADLALMGVGT VAAMVNGMSE PLMTVVFAAV IESFGGSDNS AVLHRVSKVV MYYIYLGIGT
0101: ALASFLQVSC WTMAGERQSA RLRSLYLEAV LKQDVSFFDV EMTTGEAISR MSADTVLVQD ALGEKVGKYA QLLTTFVGGF VIGFVRGWTL ALVMLACIPP
0201: SILSFATVSR LRAQISARRQ ASYDDAGNVV EQSIRAIRTV VSFNGEKKAV ALYNALIKKA YKATVLEGLV TGLGIGCIFC VVFCSYSLAF WYGAKLIISK
0301: GYTGGQVINV VFAILTGSMA IGNASPSISA IAEGQSAAHR LFEIINRKPK IDISDTSGIV LDDIKGDVEL NNVFFRYPAR PEQLILNGLS LQVPSGTTMA
0401: IVGESGSGKS TLISLVERFY DPQAGEVLID GINIKNLKLQ WIRGKISLVS QEPLLFMTSI KDNITYGKED ATLEEIKRAA ELANAANFIE KLPNAYETMV
0501: GQSGAQLSGG QKQRIAIARA ILKNPKVLLL DEATSALDVE SERVVQEALN RIMVGITTLI VAHRLSTVRN ADCITVVHQG KVVEQGAHDQ LIKDPDGAYC
0601: QLIKLQQVHT EGMHEVPYAS DSRLKSRSLS LEQSMRDSPR NRRQHSVKPL GLSGSDDLQG PANTSSQEHK EFGDSEAPQK APIGRLFNLN KPEAPILLLA
0701: VIAAFVHGLL FPLFSIMMSG GIRTFYYPAH QLRKDSRFWA LLCLLLAIIS LIAIQLEFFL FGMAGGKLVE RVRALSFQSI MHQEVAWFDD PSNSSGALGA
0801: RLFIDALNIR RLVGDNLAIL VQCTITLISG FAIAFASDWK LTLIVICVIP FLGLQNYIQV KFLNSFSEDA KVMYEDASQV VAEAVGSIRT VASFCAEKRV
0901: ITMYSKKCQA TMKQGIRSGM VGGLGFSFSN LMLYLTYALC FYVGAQFVHD GKSTFKDVFR VYFALVFTAF GISQTSAMAS DSTKAQESTT SILAVIDRRS
1001: KIDPTSDEGI KLEKVDGNID FNHVSFKYPS RPDVQVFSDF TLGIPSGKTT ALVGESGSGK STVIALLERF YDPDSGTISL DGTELKNLTL SWLRDQMGLV
1101: SQEPVLFNDT IRANIAYGKR GEATEEEIIT VAKAANAHEF ISSLPQGYNT NVGERGTQLS GGQKQRVAIA RAILKDPRVL LLDEATSALD AESERSVQDA
1201: LDKVMVSRTT IVVAHRLSTI KGADTIAVIK DGSVAEKGKH ESLMGIKGGV YASLVELHSK ASAS
0101: ALASFLQVSC WTMAGERQSA RLRSLYLEAV LKQDVSFFDV EMTTGEAISR MSADTVLVQD ALGEKVGKYA QLLTTFVGGF VIGFVRGWTL ALVMLACIPP
0201: SILSFATVSR LRAQISARRQ ASYDDAGNVV EQSIRAIRTV VSFNGEKKAV ALYNALIKKA YKATVLEGLV TGLGIGCIFC VVFCSYSLAF WYGAKLIISK
0301: GYTGGQVINV VFAILTGSMA IGNASPSISA IAEGQSAAHR LFEIINRKPK IDISDTSGIV LDDIKGDVEL NNVFFRYPAR PEQLILNGLS LQVPSGTTMA
0401: IVGESGSGKS TLISLVERFY DPQAGEVLID GINIKNLKLQ WIRGKISLVS QEPLLFMTSI KDNITYGKED ATLEEIKRAA ELANAANFIE KLPNAYETMV
0501: GQSGAQLSGG QKQRIAIARA ILKNPKVLLL DEATSALDVE SERVVQEALN RIMVGITTLI VAHRLSTVRN ADCITVVHQG KVVEQGAHDQ LIKDPDGAYC
0601: QLIKLQQVHT EGMHEVPYAS DSRLKSRSLS LEQSMRDSPR NRRQHSVKPL GLSGSDDLQG PANTSSQEHK EFGDSEAPQK APIGRLFNLN KPEAPILLLA
0701: VIAAFVHGLL FPLFSIMMSG GIRTFYYPAH QLRKDSRFWA LLCLLLAIIS LIAIQLEFFL FGMAGGKLVE RVRALSFQSI MHQEVAWFDD PSNSSGALGA
0801: RLFIDALNIR RLVGDNLAIL VQCTITLISG FAIAFASDWK LTLIVICVIP FLGLQNYIQV KFLNSFSEDA KVMYEDASQV VAEAVGSIRT VASFCAEKRV
0901: ITMYSKKCQA TMKQGIRSGM VGGLGFSFSN LMLYLTYALC FYVGAQFVHD GKSTFKDVFR VYFALVFTAF GISQTSAMAS DSTKAQESTT SILAVIDRRS
1001: KIDPTSDEGI KLEKVDGNID FNHVSFKYPS RPDVQVFSDF TLGIPSGKTT ALVGESGSGK STVIALLERF YDPDSGTISL DGTELKNLTL SWLRDQMGLV
1101: SQEPVLFNDT IRANIAYGKR GEATEEEIIT VAKAANAHEF ISSLPQGYNT NVGERGTQLS GGQKQRVAIA RAILKDPRVL LLDEATSALD AESERSVQDA
1201: LDKVMVSRTT IVVAHRLSTI KGADTIAVIK DGSVAEKGKH ESLMGIKGGV YASLVELHSK ASAS
0001: MNGDGAREGD SVSHEPSTSK SPKEGEETKK EEKSEEKANT VPFYKLFAFA DSSDVLLMIC GSIGAIGNGM SLPFMTLLFG DLIDSFGKNQ NNKDIVDVVS
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
Arabidopsis Description
ABCB11ABC transporter B family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.