Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G257900.1 | Wheat | peroxisome | 97.42 | 80.9 |
| HORVU3Hr1G065320.47 | Barley | plasma membrane | 96.28 | 79.26 |
| TraesCS3A01G258000.1 | Wheat | mitochondrion | 99.05 | 78.28 |
| TraesCS6B01G145600.1 | Wheat | peroxisome | 90.08 | 74.68 |
| Zm00001d011644_P002 | Maize | plasma membrane | 78.34 | 63.89 |
| TraesCS3B01G290300.2 | Wheat | peroxisome | 70.8 | 58.56 |
| TraesCS3B01G291100.3 | Wheat | peroxisome | 66.32 | 54.98 |
| TraesCS2B01G012300.1 | Wheat | plasma membrane | 65.94 | 54.93 |
| TraesCS2B01G012100.3 | Wheat | plasma membrane | 64.98 | 54.35 |
| VIT_10s0003g02550.t01 | Wine grape | cytosol, nucleus, peroxisome | 28.24 | 54.31 |
| TraesCS2B01G012200.1 | Wheat | golgi | 55.15 | 53.57 |
| TraesCS3B01G291000.1 | Wheat | peroxisome | 62.5 | 52.07 |
| Bra017539.1-P | Field mustard | plasma membrane | 50.57 | 51.41 |
| TraesCS1B01G387400.1 | Wheat | peroxisome | 60.88 | 50.43 |
| TraesCS3B01G401600.3 | Wheat | cytosol, peroxisome, plasma membrane | 60.88 | 49.92 |
| GSMUA_Achr2P20180_001 | Banana | plasma membrane | 44.18 | 47.49 |
| VIT_10s0003g02540.t01 | Wine grape | plasma membrane | 55.34 | 47.12 |
| Bra012621.1-P | Field mustard | plasma membrane | 55.92 | 46.99 |
| KRH21125 | Soybean | plasma membrane | 56.01 | 46.55 |
| TraesCS3B01G136800.1 | Wheat | golgi, mitochondrion, peroxisome, plasma membrane, plastid | 54.96 | 45.93 |
| VIT_10s0003g02570.t01 | Wine grape | plasma membrane | 54.29 | 45.92 |
| Solyc02g071350.2.1 | Tomato | plastid | 55.25 | 45.84 |
| VIT_10s0003g02580.t01 | Wine grape | plasma membrane | 55.15 | 45.69 |
| PGSC0003DMT400007960 | Potato | plasma membrane | 54.96 | 45.64 |
| KRH11119 | Soybean | plasma membrane | 54.1 | 45.47 |
| AT4G18050.2 | Thale cress | plasma membrane | 53.63 | 45.1 |
| Solyc02g071340.1.1 | Tomato | plasma membrane | 53.34 | 44.26 |
| TraesCS1B01G099000.1 | Wheat | cytosol, peroxisome, plasma membrane | 53.72 | 44.16 |
| CDY35168 | Canola | golgi, peroxisome, plasma membrane | 45.52 | 43.72 |
| PGSC0003DMT400034908 | Potato | plasma membrane | 51.72 | 43.05 |
| Solyc03g005860.2.1 | Tomato | plasma membrane | 51.05 | 42.49 |
| AT5G46540.1 | Thale cress | golgi | 49.71 | 41.75 |
| TraesCS2B01G550700.2 | Wheat | plasma membrane | 39.41 | 32.86 |
| TraesCS2B01G341800.2 | Wheat | cytosol, peroxisome, plasma membrane | 39.03 | 32.36 |
| TraesCS6B01G291900.1 | Wheat | peroxisome | 38.45 | 31.91 |
| TraesCS2B01G358200.1 | Wheat | plasma membrane | 34.26 | 28.38 |
| TraesCS7B01G181700.1 | Wheat | cytosol | 36.64 | 28.07 |
| TraesCS4B01G298100.1 | Wheat | mitochondrion, plasma membrane | 34.92 | 27.85 |
| TraesCS7B01G203400.1 | Wheat | peroxisome | 32.25 | 26.87 |
| TraesCS6B01G170700.1 | Wheat | plasma membrane | 31.3 | 26.16 |
| TraesCS3B01G607600.1 | Wheat | cytosol, plasma membrane, vacuole | 35.11 | 26.1 |
| TraesCS4B01G203000.1 | Wheat | cytosol, plasma membrane, plastid | 34.64 | 25.76 |
| TraesCS7B01G203300.1 | Wheat | peroxisome | 30.82 | 25.55 |
| Os01t0695800-01 | Rice | plasma membrane | 3.63 | 14.5 |
| TraesCS6B01G145800.1 | Wheat | cytosol | 3.44 | 14.23 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 |
| InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 |
| PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF272 | SMART:SM00382 | SUPFAM:SSF52540 |
| SUPFAM:SSF90123 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3B01G290700 | EnsemblPlants:TraesCS3B01G290700.1 | TIGR:cd03249 | SEG:seg |
Description
No Description!
Coordinates
chr3B:+:466256736..466265442
Molecular Weight (calculated)
113650.0 Da
IEP (calculated)
8.530
GRAVY (calculated)
0.153
Length
1048 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDATAEASSG EGARHAHGGK DDRPEKKVPL LGMFRYADRL DMLLMVVGSL GAVGNGVSEP LISVLFGDVI NSFGESARST VLRAVTKVVL NFIYLGIGTT
0101: VAAFLQVACW TMAGERQSAR IRSLYLKSVL RQDIAFFDTE MTTGEAVSRM SSDTVIIQDA LGEKAGKLVQ LASAFFGGFI IAFTKGWLLT LVMLTSLPLI
0201: AIAGAVSAQL LTRVSSKRLT SYSDAADTVE QTIGSIRTVV SFNGEKKAIE MYNKFIKNAY KTVVEEGIVN GFGMGSVFCI LFSSYGLAFW YGGKLIIDKG
0301: YTGGKVLTIL FAVLTGATSL GNATPSISAI AEGQSAAYRL FETIERKPEI DSDDTSGMIM ENIKGDVELK DVYFRYPARP GQLILDGLSL QVASGTTMAI
0401: VGESGSGKST VVSLVERFYD PQAGEVLIDG VNIKNLNLDW IRGKIGLVSQ EPLLFMTSIK DNIIYGKEEA TLEEIKRAAE LANAANFIDK LPNGYDTLVG
0501: QRGTLLSGGQ KQRIAIARAI LKDPKILLLD EATSALDVES ERIVQEALNR IMVQRTTLVV AHRLSTVRNV DCITVVHQGK IVEQGPHHAL VKDPNGAYSQ
0601: LIRLQETRGD ERRKIQDSGV PNSLSKSTSL SNRRSMTKDS FGNSNRYSFK NPLGLSVELH EDEITGEQNK DDLSNGKTLQ KAPIGRLFYL NKPEVPFLLL
0701: GAIAASVHGV IFPLFGILMS GVIKSFYEPP DKLRKDSSFW ALISVVLGFA SFIAIPAEYL LFGIAGGKLI ERVRTLSFQN IVHQEVAWFD NPSNSSGALG
0801: TRLSVDALNV RRLVGDNLGL IVQSTAALIT GFVIAFMADW RLALIITCVI PLVGAQGYAQ VKFLFSEEAK EMYEDASQVA TDAVGSIRTI ASFCAEKRVV
0901: TTYKKKCEAL RKQGIRSGIV GGLGFGFSFL VLYLTYALCF YVGAQFVRQG KTTFADVFKV FFALVLAAVG VSQASALASN ATKAGDSAIS VFSILDRKSK
1001: IDTSNDEGLV LENVTGDIHF SNVSFKYPSR PDVQIFSDFT LHIPSRKV
0101: VAAFLQVACW TMAGERQSAR IRSLYLKSVL RQDIAFFDTE MTTGEAVSRM SSDTVIIQDA LGEKAGKLVQ LASAFFGGFI IAFTKGWLLT LVMLTSLPLI
0201: AIAGAVSAQL LTRVSSKRLT SYSDAADTVE QTIGSIRTVV SFNGEKKAIE MYNKFIKNAY KTVVEEGIVN GFGMGSVFCI LFSSYGLAFW YGGKLIIDKG
0301: YTGGKVLTIL FAVLTGATSL GNATPSISAI AEGQSAAYRL FETIERKPEI DSDDTSGMIM ENIKGDVELK DVYFRYPARP GQLILDGLSL QVASGTTMAI
0401: VGESGSGKST VVSLVERFYD PQAGEVLIDG VNIKNLNLDW IRGKIGLVSQ EPLLFMTSIK DNIIYGKEEA TLEEIKRAAE LANAANFIDK LPNGYDTLVG
0501: QRGTLLSGGQ KQRIAIARAI LKDPKILLLD EATSALDVES ERIVQEALNR IMVQRTTLVV AHRLSTVRNV DCITVVHQGK IVEQGPHHAL VKDPNGAYSQ
0601: LIRLQETRGD ERRKIQDSGV PNSLSKSTSL SNRRSMTKDS FGNSNRYSFK NPLGLSVELH EDEITGEQNK DDLSNGKTLQ KAPIGRLFYL NKPEVPFLLL
0701: GAIAASVHGV IFPLFGILMS GVIKSFYEPP DKLRKDSSFW ALISVVLGFA SFIAIPAEYL LFGIAGGKLI ERVRTLSFQN IVHQEVAWFD NPSNSSGALG
0801: TRLSVDALNV RRLVGDNLGL IVQSTAALIT GFVIAFMADW RLALIITCVI PLVGAQGYAQ VKFLFSEEAK EMYEDASQVA TDAVGSIRTI ASFCAEKRVV
0901: TTYKKKCEAL RKQGIRSGIV GGLGFGFSFL VLYLTYALCF YVGAQFVRQG KTTFADVFKV FFALVLAAVG VSQASALASN ATKAGDSAIS VFSILDRKSK
1001: IDTSNDEGLV LENVTGDIHF SNVSFKYPSR PDVQIFSDFT LHIPSRKV
0001: MASESGLNGD PNILEEVSET KRDKEEEEEV KKTEKKDEEH EKTKTVPFYK LFAFADSFDF LLMILGTLGS IGNGLGFPLM TLLFGDLIDA FGENQTNTTD
0101: KVSKVALKFV WLGIGTFAAA FLQLSGWMIS GERQAARIRS LYLKTILRQD IAFFDIDTNT GEVVGRMSGD TVLIQDAMGE KVGKAIQLLA TFVGGFVIAF
0201: VRGWLLTLVM LSSIPLLVMA GALLAIVIAK TASRGQTAYA KAATVVEQTI GSIRTVASFT GEKQAISNYN KHLVTAYKAG VIEGGSTGLG LGTLFLVVFC
0301: SYALAVWYGG KLILDKGYTG GQVLNIIIAV LTGSMSLGQT SPCLSAFAAG QAAAYKMFET IERRPNIDSY STNGKVLDDI KGDIELKDVY FTYPARPDEQ
0401: IFRGFSLFIS SGTTVALVGQ SGSGKSTVVS LIERFYDPQA GDVLIDGINL KEFQLKWIRS KIGLVSQEPV LFTASIKDNI AYGKEDATTE EIKAAAELAN
0501: ASKFVDKLPQ GLDTMVGEHG TQLSGGQKQR IAVARAILKD PRILLLDEAT SALDAESERV VQEALDRIMV NRTTVVVAHR LSTVRNADMI AVIHQGKIVE
0601: KGSHTELLKD PEGAYSQLIR LQEEKKSDEN AAEEQKMSSI ESFKQSSLRK SSLGRSLSKG GSSRGNSSRH SFNMFGFPAG IDGNVVQDQE EDDTTQPKTE
0701: PKKVSIFRIA ALNKPEIPVL ILGSISAAAN GVILPIFGIL ISSVIKAFFQ PPKKLKEDTS FWAIIFMVLG FASIIAYPAQ TFFFAIAGCK LVQRIRSMCF
0801: EKVVHMEVGW FDEPENSSGT IGARLSADAA TIRGLVGDSL AQTVQNLSSI LAGLIIAFLA CWQLAFVVLA MLPLIALNGF LYMKFMKGFS ADAKKMYGEA
0901: SQVANDAVGS IRTVASFCAE DKVMNMYSKK CEGPMKNGIR QGIVSGIGFG FSFFVLFSSY AASFYVGARL VDDGKTTFDS VFRVFFALTM AAMAISQSSS
1001: LSPDSSKADV AAASIFAIMD RESKIDPSVE SGRVLDNVKG DIELRHVSFK YPARPDVQIF QDLCLSIRAG KTVALVGESG SGKSTVIALL QRFYDPDSGE
1101: ITLDGVEIKS LRLKWLRQQT GLVSQEPILF NETIRANIAY GKGGDASESE IVSSAELSNA HGFISGLQQG YDTMVGERGI QLSGGQKQRV AIARAIVKDP
1201: KVLLLDEATS ALDAESERVV QDALDRVMVN RTTIVVAHRL STIKNADVIA VVKNGVIVEK GKHDTLINIK DGVYASLVQL HLTAAS
0101: KVSKVALKFV WLGIGTFAAA FLQLSGWMIS GERQAARIRS LYLKTILRQD IAFFDIDTNT GEVVGRMSGD TVLIQDAMGE KVGKAIQLLA TFVGGFVIAF
0201: VRGWLLTLVM LSSIPLLVMA GALLAIVIAK TASRGQTAYA KAATVVEQTI GSIRTVASFT GEKQAISNYN KHLVTAYKAG VIEGGSTGLG LGTLFLVVFC
0301: SYALAVWYGG KLILDKGYTG GQVLNIIIAV LTGSMSLGQT SPCLSAFAAG QAAAYKMFET IERRPNIDSY STNGKVLDDI KGDIELKDVY FTYPARPDEQ
0401: IFRGFSLFIS SGTTVALVGQ SGSGKSTVVS LIERFYDPQA GDVLIDGINL KEFQLKWIRS KIGLVSQEPV LFTASIKDNI AYGKEDATTE EIKAAAELAN
0501: ASKFVDKLPQ GLDTMVGEHG TQLSGGQKQR IAVARAILKD PRILLLDEAT SALDAESERV VQEALDRIMV NRTTVVVAHR LSTVRNADMI AVIHQGKIVE
0601: KGSHTELLKD PEGAYSQLIR LQEEKKSDEN AAEEQKMSSI ESFKQSSLRK SSLGRSLSKG GSSRGNSSRH SFNMFGFPAG IDGNVVQDQE EDDTTQPKTE
0701: PKKVSIFRIA ALNKPEIPVL ILGSISAAAN GVILPIFGIL ISSVIKAFFQ PPKKLKEDTS FWAIIFMVLG FASIIAYPAQ TFFFAIAGCK LVQRIRSMCF
0801: EKVVHMEVGW FDEPENSSGT IGARLSADAA TIRGLVGDSL AQTVQNLSSI LAGLIIAFLA CWQLAFVVLA MLPLIALNGF LYMKFMKGFS ADAKKMYGEA
0901: SQVANDAVGS IRTVASFCAE DKVMNMYSKK CEGPMKNGIR QGIVSGIGFG FSFFVLFSSY AASFYVGARL VDDGKTTFDS VFRVFFALTM AAMAISQSSS
1001: LSPDSSKADV AAASIFAIMD RESKIDPSVE SGRVLDNVKG DIELRHVSFK YPARPDVQIF QDLCLSIRAG KTVALVGESG SGKSTVIALL QRFYDPDSGE
1101: ITLDGVEIKS LRLKWLRQQT GLVSQEPILF NETIRANIAY GKGGDASESE IVSSAELSNA HGFISGLQQG YDTMVGERGI QLSGGQKQRV AIARAIVKDP
1201: KVLLLDEATS ALDAESERVV QDALDRVMVN RTTIVVAHRL STIKNADVIA VVKNGVIVEK GKHDTLINIK DGVYASLVQL HLTAAS
Arabidopsis Description
ABCB4ABC transporter B family member 4 [Source:UniProtKB/Swiss-Prot;Acc:O80725]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.