Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G257500.1 | Wheat | plasma membrane | 98.42 | 99.28 |
| TraesCS3A01G257500.1 | Wheat | plasma membrane | 98.11 | 98.89 |
| KXG33192 | Sorghum | cytosol | 85.0 | 84.87 |
| Zm00001d043762_P001 | Maize | cytosol | 85.08 | 84.68 |
| TraesCS2B01G012300.1 | Wheat | plasma membrane | 82.48 | 83.07 |
| TraesCS6B01G145800.1 | Wheat | cytosol | 16.34 | 81.82 |
| TraesCS2B01G012100.3 | Wheat | plasma membrane | 80.43 | 81.32 |
| TraesCS2B01G012200.1 | Wheat | golgi | 67.96 | 79.8 |
| TraesCS6B01G145600.1 | Wheat | peroxisome | 71.35 | 71.52 |
| TraesCS3B01G290700.1 | Wheat | peroxisome | 58.56 | 70.8 |
| TraesCS1B01G387400.1 | Wheat | peroxisome | 68.98 | 69.09 |
| TraesCS3B01G291100.3 | Wheat | peroxisome | 67.96 | 68.12 |
| TraesCS3B01G291000.1 | Wheat | peroxisome | 65.82 | 66.3 |
| VIT_10s0003g02540.t01 | Wine grape | plasma membrane | 62.12 | 63.93 |
| TraesCS3B01G401600.3 | Wheat | cytosol, peroxisome, plasma membrane | 64.33 | 63.77 |
| GSMUA_Achr2P20180_001 | Banana | plasma membrane | 47.99 | 62.36 |
| Bra012621.1-P | Field mustard | plasma membrane | 60.93 | 61.91 |
| Solyc02g071350.2.1 | Tomato | plastid | 61.17 | 61.36 |
| VIT_10s0003g02570.t01 | Wine grape | plasma membrane | 59.98 | 61.34 |
| PGSC0003DMT400007960 | Potato | plasma membrane | 61.09 | 61.33 |
| TraesCS3B01G136800.1 | Wheat | golgi, mitochondrion, peroxisome, plasma membrane, plastid | 60.62 | 61.24 |
| KRH11119 | Soybean | plasma membrane | 60.06 | 61.03 |
| KRH21125 | Soybean | plasma membrane | 60.54 | 60.82 |
| AT4G18050.2 | Thale cress | plasma membrane | 59.59 | 60.59 |
| VIT_10s0003g02580.t01 | Wine grape | plasma membrane | 59.91 | 60.0 |
| Solyc02g071340.1.1 | Tomato | plasma membrane | 59.51 | 59.7 |
| CDY35168 | Canola | golgi, peroxisome, plasma membrane | 51.38 | 59.67 |
| VIT_10s0003g02550.t01 | Wine grape | cytosol, nucleus, peroxisome | 25.41 | 59.08 |
| PGSC0003DMT400034908 | Potato | plasma membrane | 58.33 | 58.7 |
| Solyc03g005860.2.1 | Tomato | plasma membrane | 57.54 | 57.9 |
| TraesCS1B01G099000.1 | Wheat | cytosol, peroxisome, plasma membrane | 58.01 | 57.65 |
| AT5G46540.1 | Thale cress | golgi | 56.35 | 57.21 |
| Bra017539.1-P | Field mustard | plasma membrane | 44.36 | 54.51 |
| TraesCS2B01G550700.2 | Wheat | plasma membrane | 43.65 | 43.99 |
| TraesCS2B01G341800.2 | Wheat | cytosol, peroxisome, plasma membrane | 42.86 | 42.96 |
| TraesCS6B01G291900.1 | Wheat | peroxisome | 41.52 | 41.65 |
| TraesCS2B01G358200.1 | Wheat | plasma membrane | 37.88 | 37.94 |
| TraesCS7B01G181700.1 | Wheat | cytosol | 40.96 | 37.94 |
| TraesCS6B01G170700.1 | Wheat | plasma membrane | 37.02 | 37.4 |
| TraesCS7B01G203400.1 | Wheat | peroxisome | 36.78 | 37.04 |
| TraesCS7B01G203300.1 | Wheat | peroxisome | 36.62 | 36.71 |
| TraesCS4B01G298100.1 | Wheat | mitochondrion, plasma membrane | 38.04 | 36.68 |
| TraesCS3B01G607600.1 | Wheat | cytosol, plasma membrane, vacuole | 38.36 | 34.47 |
| TraesCS4B01G203000.1 | Wheat | cytosol, plasma membrane, plastid | 37.88 | 34.07 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 |
| InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 |
| PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF204 | SMART:SM00382 | SUPFAM:SSF52540 |
| SUPFAM:SSF90123 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3B01G290300 | EnsemblPlants:TraesCS3B01G290300.2 | TIGR:cd03249 | SEG:seg |
Description
No Description!
Coordinates
chr3B:-:465928646..465935266
Molecular Weight (calculated)
136845.0 Da
IEP (calculated)
6.668
GRAVY (calculated)
0.112
Length
1267 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDAAAAAAAK GRDGEEKEGG HGKRVSFTGM FRYADRTDQL LMLVGTLAAL ANGVSQPLMT VIFGDMIDAF GGATSDNVLH RVNKAVLSFV YLGIGTAVVS
0101: FLQVACWTIT GERQATRIRS LYLKSVLRQD ISFFDVEMTT GQIVSRMSGD TVLVQDAIGE KVGKFLQLVA TFIGGFVVAF VKGWLLSLVM LACIPPVVIA
0201: GGAVAKVLST ISSKGQESYS DAANVVEQTI GSIKTVASFN GEKQAIGEYN KLINKAYKTT VKEGLANGFG MGSVFFIFFS SYGLAIWYGG KLILTKGYTG
0301: GEVISILFAI MTGAMSLGNA TPCMTAFAEG QSAAHRLFTT IKRKPEIDPD DKTGKQLEDI KGDVELRDVY FSYPARPEQL IFDGFSLHVS SGTTMAIVGE
0401: SGSGKSTVIS LVERFYDPQA GEVLIDGINI KSLQLDSVRG KIGLVSQEPL LFMTSIKYNI TYGKEGATIE EIKRAAELAN AANFIDKLPN GYDTMVGQRG
0501: AQLSGGQKQR IAIARAIIKN PKILLLDEAT SALDVESERI VQEALNRIMV DRTTLVVAHR LTTVRNADCI SVVQQGKIVE QGPHDELVVN PDGAYSQLIR
0601: LQENNEEEQK VDHRRLDPRS KSTSLSLKRS ISRGSAGNSS RNSFNLSFGL PGAVELPEGN DTHGENHTEQ DGEVPKKAPM GRLALLNKPE VLIILLGSLA
0701: AAVHGVLFPM FGVMISSAIK TFYEPPDKLR KDSSFWGLMC VVLGIISIIS IPAELFLFGI AGGKLIERIR AMSFRSIVHQ EVAWFDNPKN SSGALGARLS
0801: VDALNVRRLV GDNLALTVQI ISTLITGFVI AMIADWKLSL IILCVIPLVG LQGYAQVKFL KGFSQDAKMM YEDASQVATD AISSIRTVAS FCSEKRITRI
0901: YDDKCEASMS QGVRTGIVGG IGFGFSFLML YLTYGLCFYV GAQFVRHGQS SFGDVFKVRN CIISEVFFAL VLATIGVSQT SAMATDSTKA KDSAISIFAL
1001: LDRKSEIDSS RNEGLTLDEV KGNIDFQHVS FKYPTRPDIQ IFSDFTLHIP SGKTVALVGE SGSGKSTVIG LLERFYNPDS GTISLDGVEI KSLNINWLRD
1101: QTGLVSQEPV LFNDTIRANI AYGKDGEVTE EELIAAAKAS NAHEFISSLP QGYDTTVGER GIQLSGGQKQ RVAIARAILK DPKILLLDEA TSALDAESER
1201: IVQDALDNVM VGRTTVVVAH RLSTIKGADI IAVLKDGAIV EKGRHEVLMN IKDGVYASLV ELRSASS
0101: FLQVACWTIT GERQATRIRS LYLKSVLRQD ISFFDVEMTT GQIVSRMSGD TVLVQDAIGE KVGKFLQLVA TFIGGFVVAF VKGWLLSLVM LACIPPVVIA
0201: GGAVAKVLST ISSKGQESYS DAANVVEQTI GSIKTVASFN GEKQAIGEYN KLINKAYKTT VKEGLANGFG MGSVFFIFFS SYGLAIWYGG KLILTKGYTG
0301: GEVISILFAI MTGAMSLGNA TPCMTAFAEG QSAAHRLFTT IKRKPEIDPD DKTGKQLEDI KGDVELRDVY FSYPARPEQL IFDGFSLHVS SGTTMAIVGE
0401: SGSGKSTVIS LVERFYDPQA GEVLIDGINI KSLQLDSVRG KIGLVSQEPL LFMTSIKYNI TYGKEGATIE EIKRAAELAN AANFIDKLPN GYDTMVGQRG
0501: AQLSGGQKQR IAIARAIIKN PKILLLDEAT SALDVESERI VQEALNRIMV DRTTLVVAHR LTTVRNADCI SVVQQGKIVE QGPHDELVVN PDGAYSQLIR
0601: LQENNEEEQK VDHRRLDPRS KSTSLSLKRS ISRGSAGNSS RNSFNLSFGL PGAVELPEGN DTHGENHTEQ DGEVPKKAPM GRLALLNKPE VLIILLGSLA
0701: AAVHGVLFPM FGVMISSAIK TFYEPPDKLR KDSSFWGLMC VVLGIISIIS IPAELFLFGI AGGKLIERIR AMSFRSIVHQ EVAWFDNPKN SSGALGARLS
0801: VDALNVRRLV GDNLALTVQI ISTLITGFVI AMIADWKLSL IILCVIPLVG LQGYAQVKFL KGFSQDAKMM YEDASQVATD AISSIRTVAS FCSEKRITRI
0901: YDDKCEASMS QGVRTGIVGG IGFGFSFLML YLTYGLCFYV GAQFVRHGQS SFGDVFKVRN CIISEVFFAL VLATIGVSQT SAMATDSTKA KDSAISIFAL
1001: LDRKSEIDSS RNEGLTLDEV KGNIDFQHVS FKYPTRPDIQ IFSDFTLHIP SGKTVALVGE SGSGKSTVIG LLERFYNPDS GTISLDGVEI KSLNINWLRD
1101: QTGLVSQEPV LFNDTIRANI AYGKDGEVTE EELIAAAKAS NAHEFISSLP QGYDTTVGER GIQLSGGQKQ RVAIARAILK DPKILLLDEA TSALDAESER
1201: IVQDALDNVM VGRTTVVVAH RLSTIKGADI IAVLKDGAIV EKGRHEVLMN IKDGVYASLV ELRSASS
0001: MNGDGAREGD SVSHEPSTSK SPKEGEETKK EEKSEEKANT VPFYKLFAFA DSSDVLLMIC GSIGAIGNGM SLPFMTLLFG DLIDSFGKNQ NNKDIVDVVS
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
Arabidopsis Description
ABCB11ABC transporter B family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.