Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G536300.1 | Wheat | cytosol, plasma membrane, vacuole | 98.72 | 99.36 |
| TraesCS3D01G541700.1 | Wheat | cytosol, plasma membrane, vacuole | 99.08 | 99.29 |
| KXG34231 | Sorghum | cytosol, plasma membrane, vacuole | 93.19 | 93.79 |
| Zm00001d041947_P001 | Maize | cytosol, peroxisome, plasma membrane | 91.42 | 91.74 |
| HORVU3Hr1G117180.10 | Barley | plastid | 89.57 | 88.63 |
| GSMUA_Achr3P17720_001 | Banana | peroxisome | 77.38 | 87.14 |
| Solyc04g010310.2.1 | Tomato | plasma membrane | 74.26 | 81.48 |
| VIT_13s0019g00310.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 74.96 | 81.31 |
| TraesCS4B01G203000.1 | Wheat | cytosol, plasma membrane, plastid | 80.35 | 80.41 |
| KRH70512 | Soybean | extracellular | 79.57 | 80.03 |
| KRG92957 | Soybean | nucleus | 79.36 | 79.99 |
| KRH36206 | Soybean | cytosol, golgi, plastid | 79.01 | 79.63 |
| KRH01590 | Soybean | mitochondrion | 79.01 | 79.46 |
| CDY24958 | Canola | mitochondrion, plasma membrane, plastid | 77.52 | 78.35 |
| VIT_06s0004g04100.t01 | Wine grape | cytosol | 77.87 | 78.15 |
| CDY07647 | Canola | cytosol | 77.52 | 78.02 |
| CDX76106 | Canola | cytosol, golgi, peroxisome | 77.38 | 77.93 |
| Bra014756.1-P | Field mustard | cytosol, golgi, peroxisome | 77.31 | 77.86 |
| AT3G55320.1 | Thale cress | cytosol, peroxisome, plasma membrane | 77.73 | 77.84 |
| CDY65312 | Canola | cytosol | 77.16 | 77.77 |
| Bra000136.1-P | Field mustard | cytosol, mitochondrion, peroxisome | 77.38 | 77.76 |
| CDY20443 | Canola | cytosol, mitochondrion, plasma membrane | 77.23 | 77.73 |
| CDY53591 | Canola | cytosol, mitochondrion, plasma membrane | 77.45 | 77.56 |
| Bra005036.1-P | Field mustard | mitochondrion | 77.38 | 77.49 |
| AT2G39480.1 | Thale cress | cytosol, mitochondrion, plasma membrane | 77.09 | 77.26 |
| TraesCS6B01G145800.1 | Wheat | cytosol | 9.01 | 50.2 |
| TraesCS2B01G550700.2 | Wheat | plasma membrane | 37.73 | 42.32 |
| TraesCS2B01G341800.2 | Wheat | cytosol, peroxisome, plasma membrane | 37.59 | 41.93 |
| TraesCS6B01G291900.1 | Wheat | peroxisome | 37.38 | 41.73 |
| TraesCS7B01G181700.1 | Wheat | cytosol | 38.37 | 39.55 |
| TraesCS1B01G099000.1 | Wheat | cytosol, peroxisome, plasma membrane | 34.82 | 38.51 |
| TraesCS3B01G290300.2 | Wheat | peroxisome | 34.47 | 38.36 |
| TraesCS3B01G136800.1 | Wheat | golgi, mitochondrion, peroxisome, plasma membrane, plastid | 34.11 | 38.36 |
| TraesCS6B01G145600.1 | Wheat | peroxisome | 34.11 | 38.05 |
| TraesCS2B01G012100.3 | Wheat | plasma membrane | 33.62 | 37.83 |
| TraesCS2B01G012200.1 | Wheat | golgi | 28.94 | 37.81 |
| TraesCS2B01G012300.1 | Wheat | plasma membrane | 33.69 | 37.76 |
| TraesCS1B01G387400.1 | Wheat | peroxisome | 33.48 | 37.31 |
| TraesCS3B01G291100.3 | Wheat | peroxisome | 33.4 | 37.26 |
| TraesCS3B01G401600.3 | Wheat | cytosol, peroxisome, plasma membrane | 33.55 | 37.01 |
| TraesCS3B01G291000.1 | Wheat | peroxisome | 32.7 | 36.65 |
| TraesCS7B01G203400.1 | Wheat | peroxisome | 31.49 | 35.29 |
| TraesCS3B01G290700.1 | Wheat | peroxisome | 26.1 | 35.11 |
| TraesCS7B01G203300.1 | Wheat | peroxisome | 30.92 | 34.49 |
| TraesCS2B01G358200.1 | Wheat | plasma membrane | 30.57 | 34.07 |
| TraesCS6B01G170700.1 | Wheat | plasma membrane | 30.28 | 34.05 |
| TraesCS4B01G298100.1 | Wheat | mitochondrion, plasma membrane | 30.28 | 32.5 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 | InterPro:IPR011527 |
| InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | PFscan:PS50893 | PFscan:PS50929 |
| PANTHER:PTHR24222 | PANTHER:PTHR24222:SF21 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 | TMHMM:TMhelix |
| EnsemblPlantsGene:TraesCS3B01G607600 | EnsemblPlants:TraesCS3B01G607600.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3B:+:826086442..826096588
Molecular Weight (calculated)
155404.0 Da
IEP (calculated)
6.837
GRAVY (calculated)
0.067
Length
1410 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVSRGLFGWS PPHVQPLTPV SETSEPPESP SPYAADAFGV GGPGGDGPPR HPDGGAGPED GDGDDEGAEG EDPEPPPAAV PFKRLFACAD RLDWALMAAG
0101: GAAAAAHGVA LVVYLHLFGR AINSLHGRHT DQLFRDIKQH ALYFLYIAIG VFFAGWIEVS CWILTGERQT AVIRSKYVQV LLNQDMSFFD TYGNNGDIVS
0201: QVLSDVLLIQ SALSEKVGNY IHNMATFFGG LVIGLLNCWQ IALLTLATGP FIVAAGGISN IFLHRLAENI QDAYGEAASI AEQAILYIRT LYSFTNETLA
0301: KYSYATSLQA TLRYGILISL VQGLGLGFTY GLAICSCALQ LWVGRFLILR GRANGGEIVV ALFAIILSGL GLNQAATNFY SFEQGRIAAY RLYEMISRST
0401: STVNQDGCTL NSVQGNIEFR NVYFSYLSRP EIPILSGFYL TVPARKTVAL VGRNGSGKSS IIPLMERFYD PTLGEVLLDG ENIKNLKLEW LRSQIGLVTQ
0501: EPALLSLSIR ENIAYGRSAT TDQIEEAAKT AHAHTFISSL EKGYETQVGR AGLSLTEEQK IKLSIARAVL SNPSILLLDE VTGALDFEAE KAVQEALDVL
0601: MLGRSTIIIA RRLSLIRNAD YIAVMEEGQL VEMGTHEELL NLDGLYAELL KCEEAAKLPK RTPMRNYKEP SSFQIERESS ASHSFQESSS PIMSKSPSLQ
0701: KTHGFLAFRN SDANPNSRES PNIQSPPSEQ MAEIRLPMVP SERAPSIKRQ DSFEMKLPDL PKIDVPLHRQ SSNTSDPESP ISPLLTSDPK NERSHSKTFS
0801: RTLDMFDNFR SDPSKKHQTK APSFWKLAEL SLTEYFYALL GSAGAACFGS FNPLLAYAIS LILVAYYRIG VRDVHDEVNK YCSFIVGMGI ITVLANFLQH
0901: FYFGIMGEKM TERVRRMMFS AILRNEVGWF DDEENSADIL SMRLANDATF VRAAFSNRLS IFIQDTSAIF VALLLGMLLE WRVALVALAT LPILVISAVA
1001: QKMWLSGFSR GIQEMHRKAS LVLEDAVRNI YTVVAFCAGN KIMELYRLQL GSILTKSFVH GMGIGFAFGF SQFLLFACNA LLLWYTAVAV KAGHLSLVTA
1101: LKEYIVFSFA TFALVEPFGL APYILKRRKS LTSVFEIIDR VPKIDPDDAS GLKPPNVYGS IEFRSIDFCY PTRPEMMVLS NFSLKVNGGQ TIAVVGVSGS
1201: GKSTIISLIE RFYDPTAGQV LLDGRDLKLF NVRWLRSHMG LVPQDPVIFS TTIRENIIYA RHNATESEMK EAARIANAHH FISSLPHGYD THVGMRGVDL
1301: TPGQKQRIAI ARVVLKNAPI VLLDEASSAI ESESSRVVQE ALDTLIMGNK TTILIAHRTA MMKHVDNIVV LNGGKIVEQG THDSLVQMNG LYIKLMQPHF
1401: TKGFRQRRLI
0101: GAAAAAHGVA LVVYLHLFGR AINSLHGRHT DQLFRDIKQH ALYFLYIAIG VFFAGWIEVS CWILTGERQT AVIRSKYVQV LLNQDMSFFD TYGNNGDIVS
0201: QVLSDVLLIQ SALSEKVGNY IHNMATFFGG LVIGLLNCWQ IALLTLATGP FIVAAGGISN IFLHRLAENI QDAYGEAASI AEQAILYIRT LYSFTNETLA
0301: KYSYATSLQA TLRYGILISL VQGLGLGFTY GLAICSCALQ LWVGRFLILR GRANGGEIVV ALFAIILSGL GLNQAATNFY SFEQGRIAAY RLYEMISRST
0401: STVNQDGCTL NSVQGNIEFR NVYFSYLSRP EIPILSGFYL TVPARKTVAL VGRNGSGKSS IIPLMERFYD PTLGEVLLDG ENIKNLKLEW LRSQIGLVTQ
0501: EPALLSLSIR ENIAYGRSAT TDQIEEAAKT AHAHTFISSL EKGYETQVGR AGLSLTEEQK IKLSIARAVL SNPSILLLDE VTGALDFEAE KAVQEALDVL
0601: MLGRSTIIIA RRLSLIRNAD YIAVMEEGQL VEMGTHEELL NLDGLYAELL KCEEAAKLPK RTPMRNYKEP SSFQIERESS ASHSFQESSS PIMSKSPSLQ
0701: KTHGFLAFRN SDANPNSRES PNIQSPPSEQ MAEIRLPMVP SERAPSIKRQ DSFEMKLPDL PKIDVPLHRQ SSNTSDPESP ISPLLTSDPK NERSHSKTFS
0801: RTLDMFDNFR SDPSKKHQTK APSFWKLAEL SLTEYFYALL GSAGAACFGS FNPLLAYAIS LILVAYYRIG VRDVHDEVNK YCSFIVGMGI ITVLANFLQH
0901: FYFGIMGEKM TERVRRMMFS AILRNEVGWF DDEENSADIL SMRLANDATF VRAAFSNRLS IFIQDTSAIF VALLLGMLLE WRVALVALAT LPILVISAVA
1001: QKMWLSGFSR GIQEMHRKAS LVLEDAVRNI YTVVAFCAGN KIMELYRLQL GSILTKSFVH GMGIGFAFGF SQFLLFACNA LLLWYTAVAV KAGHLSLVTA
1101: LKEYIVFSFA TFALVEPFGL APYILKRRKS LTSVFEIIDR VPKIDPDDAS GLKPPNVYGS IEFRSIDFCY PTRPEMMVLS NFSLKVNGGQ TIAVVGVSGS
1201: GKSTIISLIE RFYDPTAGQV LLDGRDLKLF NVRWLRSHMG LVPQDPVIFS TTIRENIIYA RHNATESEMK EAARIANAHH FISSLPHGYD THVGMRGVDL
1301: TPGQKQRIAI ARVVLKNAPI VLLDEASSAI ESESSRVVQE ALDTLIMGNK TTILIAHRTA MMKHVDNIVV LNGGKIVEQG THDSLVQMNG LYIKLMQPHF
1401: TKGFRQRRLI
0001: MMISRGLFGW SPPHMQPLTP VSEVSEPPES PSPYLDPGAE SGGGTGTAAA LAEADEEMDD QDELEPPPAA VPFSQLFACA DRFDWVLMIV GSVAAAAHGT
0101: ALIVYLHYFA KIVDVLAFSN DSSQQRSEHQ FDRLVQLSLT IVYIAGGVFI SGWIEVSCWI LTGERQTAVI RSKYVQVLLN QDMSFFDTYG NNGDIVSQVL
0201: SDVLLIQSAL SEKVGNYIHN MATFISGLVI GFVNCWEIAL ITLATGPFIV AAGGISNIFL HRLAENIQDA YAEAAGIAEQ AISYIRTLYA FTNETLAKYS
0301: YATSLQATLR YGILISLVQG LGLGFTYGLA ICSCALQLWI GRFFVHNGRA NGGEIIAALF AVILSGLGLN QAATNFYSFD QGRIAAYRLF EMITRSSSVA
0401: NQEGAVLASV QGNIEFRNVY FSYLSRPEIP ILSGFYLTVP AKKAVALVGR NGSGKSSIIP LMERFYDPTL GEVLLDGENI KNLKLEWLRS QIGLVTQEPA
0501: LLSLSIRENI AYGRDATLDQ IEEAAKNAHA HTFISSLEKG YETQVGRAGL AMTEEQKIKL SIARAVLLNP TILLLDEVTG GLDFEAERIV QEALDLLMLG
0601: RSTIIIARRL SLIKNADYIA VMEEGQLVEM GTHDELINLG GLYAELLKCE EATKLPRRMP VRNYKESAVF EVERDSSAGC GVQEPSSPKM IKSPSLQRGS
0701: GVFRPQELCF DTEESPKAHS PASEKTGEDG MSLDCADKEP TIKRQDSFEM RLPHLPKVDV QCPQQKSNGS EPESPVSPLL TSDPKNERSH SQTFSRPLSS
0801: PDDTKANGKA SKDAQHKESP SFWRLAQLSF PEWLYAVLGS LGAAIFGSFN PLLAYVIALV VTEYYKSKGG HLREEVDKWC LIIACMGIVT VVANFLQHFY
0901: FGIMGEKMTE RVRRMMFSAM LRNEVGWFDD EENSPDTLSM RLANDATFVR AAFSNRLSIF IQDSFAVIVA LLIGLLLGWR LALVALATLP ILTLSAIAQK
1001: LWLAGFSKGI QEMHRKASLV LEDAVRNIYT VVAFCAGNKV MELYRMQLQR ILRQSYLHGM AIGFAFGFSQ FLLFACNALL LWCTALSVNR GYMKLSTAIT
1101: EYMVFSFATF ALVEPFGLAP YILKRRKSLI SVFEIVDRVP TIEPDDNSAL KPPNVYGSIE LKNVDFCYPT RPEILVLSNF SLKISGGQTV AVVGVSGSGK
1201: STIISLVERY YDPVAGQVLL DGRDLKLYNL RWLRSHMGLV QQEPIIFSTT IRENIIYARH NASEAEMKEA ARIANAHHFI SSLPHGYDTH IGMRGVELTP
1301: GQKQRIAIAR VVLKNAPIIL IDEASSSIES ESSRVVQEAL DTLIMGNKTT ILIAHRAAMM RHVDNIVVLN GGRIVEEGTH DSLAAKNGLY VRLMQPHFGK
1401: GLRQHRLI
0101: ALIVYLHYFA KIVDVLAFSN DSSQQRSEHQ FDRLVQLSLT IVYIAGGVFI SGWIEVSCWI LTGERQTAVI RSKYVQVLLN QDMSFFDTYG NNGDIVSQVL
0201: SDVLLIQSAL SEKVGNYIHN MATFISGLVI GFVNCWEIAL ITLATGPFIV AAGGISNIFL HRLAENIQDA YAEAAGIAEQ AISYIRTLYA FTNETLAKYS
0301: YATSLQATLR YGILISLVQG LGLGFTYGLA ICSCALQLWI GRFFVHNGRA NGGEIIAALF AVILSGLGLN QAATNFYSFD QGRIAAYRLF EMITRSSSVA
0401: NQEGAVLASV QGNIEFRNVY FSYLSRPEIP ILSGFYLTVP AKKAVALVGR NGSGKSSIIP LMERFYDPTL GEVLLDGENI KNLKLEWLRS QIGLVTQEPA
0501: LLSLSIRENI AYGRDATLDQ IEEAAKNAHA HTFISSLEKG YETQVGRAGL AMTEEQKIKL SIARAVLLNP TILLLDEVTG GLDFEAERIV QEALDLLMLG
0601: RSTIIIARRL SLIKNADYIA VMEEGQLVEM GTHDELINLG GLYAELLKCE EATKLPRRMP VRNYKESAVF EVERDSSAGC GVQEPSSPKM IKSPSLQRGS
0701: GVFRPQELCF DTEESPKAHS PASEKTGEDG MSLDCADKEP TIKRQDSFEM RLPHLPKVDV QCPQQKSNGS EPESPVSPLL TSDPKNERSH SQTFSRPLSS
0801: PDDTKANGKA SKDAQHKESP SFWRLAQLSF PEWLYAVLGS LGAAIFGSFN PLLAYVIALV VTEYYKSKGG HLREEVDKWC LIIACMGIVT VVANFLQHFY
0901: FGIMGEKMTE RVRRMMFSAM LRNEVGWFDD EENSPDTLSM RLANDATFVR AAFSNRLSIF IQDSFAVIVA LLIGLLLGWR LALVALATLP ILTLSAIAQK
1001: LWLAGFSKGI QEMHRKASLV LEDAVRNIYT VVAFCAGNKV MELYRMQLQR ILRQSYLHGM AIGFAFGFSQ FLLFACNALL LWCTALSVNR GYMKLSTAIT
1101: EYMVFSFATF ALVEPFGLAP YILKRRKSLI SVFEIVDRVP TIEPDDNSAL KPPNVYGSIE LKNVDFCYPT RPEILVLSNF SLKISGGQTV AVVGVSGSGK
1201: STIISLVERY YDPVAGQVLL DGRDLKLYNL RWLRSHMGLV QQEPIIFSTT IRENIIYARH NASEAEMKEA ARIANAHHFI SSLPHGYDTH IGMRGVELTP
1301: GQKQRIAIAR VVLKNAPIIL IDEASSSIES ESSRVVQEAL DTLIMGNKTT ILIAHRAAMM RHVDNIVVLN GGRIVEEGTH DSLAAKNGLY VRLMQPHFGK
1401: GLRQHRLI
Arabidopsis Description
ABCB20ABC transporter B family member 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9M3B9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.