Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G145800.1 | Wheat | cytosol | 19.38 | 96.84 |
| HORVU6Hr1G021320.43 | Barley | peroxisome | 93.51 | 93.44 |
| TraesCS3B01G290700.1 | Wheat | peroxisome | 74.68 | 90.08 |
| Os01t0695800-01 | Rice | plasma membrane | 18.35 | 88.55 |
| Zm00001d011644_P002 | Maize | plasma membrane | 77.61 | 76.34 |
| TraesCS3B01G290300.2 | Wheat | peroxisome | 71.52 | 71.35 |
| TraesCS2B01G012300.1 | Wheat | plasma membrane | 67.17 | 67.49 |
| TraesCS3B01G291100.3 | Wheat | peroxisome | 67.25 | 67.25 |
| TraesCS2B01G012100.3 | Wheat | plasma membrane | 66.38 | 66.96 |
| TraesCS2B01G012200.1 | Wheat | golgi | 56.8 | 66.54 |
| TraesCS3B01G291000.1 | Wheat | peroxisome | 64.08 | 64.39 |
| TraesCS1B01G387400.1 | Wheat | peroxisome | 63.29 | 63.24 |
| TraesCS3B01G401600.3 | Wheat | cytosol, peroxisome, plasma membrane | 61.95 | 61.27 |
| VIT_10s0003g02540.t01 | Wine grape | plasma membrane | 58.15 | 59.71 |
| Bra012621.1-P | Field mustard | plasma membrane | 58.15 | 58.94 |
| VIT_10s0003g02570.t01 | Wine grape | plasma membrane | 57.44 | 58.6 |
| Solyc02g071350.2.1 | Tomato | plastid | 58.23 | 58.27 |
| KRH21125 | Soybean | plasma membrane | 58.07 | 58.21 |
| GSMUA_Achr2P20180_001 | Banana | plasma membrane | 44.78 | 58.05 |
| PGSC0003DMT400007960 | Potato | plasma membrane | 57.91 | 58.0 |
| TraesCS3B01G136800.1 | Wheat | golgi, mitochondrion, peroxisome, plasma membrane, plastid | 57.44 | 57.89 |
| KRH11119 | Soybean | plasma membrane | 56.49 | 57.26 |
| CDY35168 | Canola | golgi, peroxisome, plasma membrane | 49.21 | 57.01 |
| VIT_10s0003g02580.t01 | Wine grape | plasma membrane | 57.04 | 57.0 |
| AT4G18050.2 | Thale cress | plasma membrane | 56.09 | 56.9 |
| Solyc02g071340.1.1 | Tomato | plasma membrane | 55.78 | 55.82 |
| VIT_10s0003g02550.t01 | Wine grape | cytosol, nucleus, peroxisome | 23.97 | 55.6 |
| TraesCS1B01G099000.1 | Wheat | cytosol, peroxisome, plasma membrane | 55.46 | 54.98 |
| PGSC0003DMT400034908 | Potato | plasma membrane | 54.59 | 54.81 |
| AT5G46540.1 | Thale cress | golgi | 53.8 | 54.49 |
| Solyc03g005860.2.1 | Tomato | plasma membrane | 53.8 | 54.01 |
| Bra017539.1-P | Field mustard | plasma membrane | 42.01 | 51.5 |
| TraesCS2B01G550700.2 | Wheat | plasma membrane | 42.09 | 42.32 |
| TraesCS6B01G291900.1 | Wheat | peroxisome | 42.17 | 42.2 |
| TraesCS2B01G341800.2 | Wheat | cytosol, peroxisome, plasma membrane | 41.85 | 41.85 |
| TraesCS2B01G358200.1 | Wheat | plasma membrane | 37.9 | 37.87 |
| TraesCS4B01G298100.1 | Wheat | mitochondrion, plasma membrane | 38.61 | 37.14 |
| TraesCS7B01G203400.1 | Wheat | peroxisome | 36.23 | 36.41 |
| TraesCS7B01G181700.1 | Wheat | cytosol | 38.77 | 35.82 |
| TraesCS6B01G170700.1 | Wheat | plasma membrane | 35.21 | 35.49 |
| TraesCS7B01G203300.1 | Wheat | peroxisome | 34.73 | 34.73 |
| TraesCS3B01G607600.1 | Wheat | cytosol, plasma membrane, vacuole | 38.05 | 34.11 |
| TraesCS4B01G203000.1 | Wheat | cytosol, plasma membrane, plastid | 37.97 | 34.07 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 |
| InterPro:IPR003439 | InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 |
| ScanProsite:PS00211 | PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF272 | SMART:SM00382 |
| SUPFAM:SSF52540 | SUPFAM:SSF90123 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS6B01G145600 | EnsemblPlants:TraesCS6B01G145600.1 | TIGR:cd03249 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr6B:+:145883077..145892191
Molecular Weight (calculated)
136454.0 Da
IEP (calculated)
7.391
GRAVY (calculated)
0.101
Length
1264 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDATAEASSG EGARHGGEQR KDDQPEKKVS LLGMLRYADR LDMLLMVIGS LGAMGNGASG SLLLVLYGDV INSFGESTTS TVLPAVTKVV LNFIYLGLGT
0101: AVASFLQMSC WAMSGERQSA RIRSLYLKSV LRQDIAFFDT EMTTGEAVSR MSSDTVIIQD ALGEKAGKLI QTVSAFFGGF IVAFTKGWLL TLVMLTSLPL
0201: VAIAGAVSAQ LLTGVSSKRL TSYSDAADTV EQTIGSIRTV VSFNGEKKAI EMYNKFNKNA YKTAVEEGLV NGFGMGSVFL IILSSYGLGF WYGGKLILDK
0301: GYTGGKIITV LFAVLTGANS LGSATPSISA IAEGQSAAYR LFETIERKPE IDSDDTSGMI MENIKGNVEL KDVYFRYPAR PGQLILDGIS LQVASGTTMA
0401: IVGESGSGKS TVISLVERFY DPQAGEVLID GFNIKNLSLD WIRGKIGLVS QEPLLFMTSI KDNIIYGKED ATLEEIKRSA ELANAANFIE KLPNGYDTLV
0501: GQRGTLLSGG QKQRIAIARA ILKDPKILLL DEATSALDVE SERIVQEAIN RILVERTTLV VAHRLSTVRN VDCITVVHQG KIVEQGPHHA LVKDPNGAYS
0601: QFIRLQETRG DERRKVQDSG VPNSLSKSTS LSLRRSMTNA SSGNSNRHSF KNPPGLSLEL HEDAITDEQN TEGLPDGKTL QKAAVARLFY LNKPEVPILL
0701: LGTIAASVHG IIFPLYGLLI SGGLKSFYEP PDKLRKDSSF WALIFVVLGF ASFIAITTEY LLFAIAGGKL IERVRTLSFQ NIVHQEVAWF DNPSNSSGAL
0801: GTRLSVDALN VRRLVGDNLG LIVQSTASLI AGFVIAFTAD WRLALIITCV IPLLGAQGYA QAKFLKGFGE EAKEMYEDAS QVATDAVGSI RTIASFCAEK
0901: RVVTTYNKKC EALRKQGIRS GIVGGLGFGF SFLVLYLTFA LCFYVGAQFV RQGKSTFADV FKVFLVLVLA TLGVSQASAL ACNATKAKDS AISVFSILDR
1001: KSKIDTSSDE GMMLENVTGD IDFSNVSFKY PSRPDVQIFS DFTLHIPSRK TIALVGESGS GKSTIISLLE RFYDPDSGSI SVDGVEIKSL RVSWLRDQMG
1101: LVGQEPVLFN DTIRANITYG KHGEVTEEEV KGVAKAANAH EFISSLPQGY DTLVGEKGVQ LSGGQKQRVA IARAIIKDPK ILLLDEATSA LDAESERIVQ
1201: DALDRVVVSR TTIVVAHRLS TIKGADVIAV LKEGKIAEKG NHEALMRIKG GVYASLVELR SNSK
0101: AVASFLQMSC WAMSGERQSA RIRSLYLKSV LRQDIAFFDT EMTTGEAVSR MSSDTVIIQD ALGEKAGKLI QTVSAFFGGF IVAFTKGWLL TLVMLTSLPL
0201: VAIAGAVSAQ LLTGVSSKRL TSYSDAADTV EQTIGSIRTV VSFNGEKKAI EMYNKFNKNA YKTAVEEGLV NGFGMGSVFL IILSSYGLGF WYGGKLILDK
0301: GYTGGKIITV LFAVLTGANS LGSATPSISA IAEGQSAAYR LFETIERKPE IDSDDTSGMI MENIKGNVEL KDVYFRYPAR PGQLILDGIS LQVASGTTMA
0401: IVGESGSGKS TVISLVERFY DPQAGEVLID GFNIKNLSLD WIRGKIGLVS QEPLLFMTSI KDNIIYGKED ATLEEIKRSA ELANAANFIE KLPNGYDTLV
0501: GQRGTLLSGG QKQRIAIARA ILKDPKILLL DEATSALDVE SERIVQEAIN RILVERTTLV VAHRLSTVRN VDCITVVHQG KIVEQGPHHA LVKDPNGAYS
0601: QFIRLQETRG DERRKVQDSG VPNSLSKSTS LSLRRSMTNA SSGNSNRHSF KNPPGLSLEL HEDAITDEQN TEGLPDGKTL QKAAVARLFY LNKPEVPILL
0701: LGTIAASVHG IIFPLYGLLI SGGLKSFYEP PDKLRKDSSF WALIFVVLGF ASFIAITTEY LLFAIAGGKL IERVRTLSFQ NIVHQEVAWF DNPSNSSGAL
0801: GTRLSVDALN VRRLVGDNLG LIVQSTASLI AGFVIAFTAD WRLALIITCV IPLLGAQGYA QAKFLKGFGE EAKEMYEDAS QVATDAVGSI RTIASFCAEK
0901: RVVTTYNKKC EALRKQGIRS GIVGGLGFGF SFLVLYLTFA LCFYVGAQFV RQGKSTFADV FKVFLVLVLA TLGVSQASAL ACNATKAKDS AISVFSILDR
1001: KSKIDTSSDE GMMLENVTGD IDFSNVSFKY PSRPDVQIFS DFTLHIPSRK TIALVGESGS GKSTIISLLE RFYDPDSGSI SVDGVEIKSL RVSWLRDQMG
1101: LVGQEPVLFN DTIRANITYG KHGEVTEEEV KGVAKAANAH EFISSLPQGY DTLVGEKGVQ LSGGQKQRVA IARAIIKDPK ILLLDEATSA LDAESERIVQ
1201: DALDRVVVSR TTIVVAHRLS TIKGADVIAV LKEGKIAEKG NHEALMRIKG GVYASLVELR SNSK
0001: MNGDGAREGD SVSHEPSTSK SPKEGEETKK EEKSEEKANT VPFYKLFAFA DSSDVLLMIC GSIGAIGNGM SLPFMTLLFG DLIDSFGKNQ NNKDIVDVVS
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
Arabidopsis Description
ABCB11ABC transporter B family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.