Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G258400.3 | Wheat | peroxisome | 93.83 | 95.47 |
| TraesCS3D01G258300.1 | Wheat | cytosol, peroxisome, plasma membrane | 93.75 | 94.86 |
| TraesCS3B01G291100.3 | Wheat | peroxisome | 93.67 | 94.86 |
| EES01319 | Sorghum | cytosol | 80.62 | 81.0 |
| Os01t0695700-00 | Rice | plasma membrane | 79.14 | 79.95 |
| Zm00001d043766_P005 | Maize | cytosol | 78.05 | 78.17 |
| HORVU3Hr1G065320.47 | Barley | plasma membrane | 67.42 | 67.79 |
| HORVU3Hr1G065280.1 | Barley | plasma membrane | 66.25 | 67.19 |
| HORVU6Hr1G021320.43 | Barley | peroxisome | 65.47 | 66.25 |
| HORVU2Hr1G001530.10 | Barley | plasma membrane | 63.98 | 65.26 |
| HORVU2Hr1G001630.2 | Barley | plasma membrane | 63.98 | 65.26 |
| HORVU1Hr1G078450.24 | Barley | plasma membrane | 60.94 | 61.66 |
| VIT_10s0003g02540.t01 | Wine grape | plasma membrane | 56.41 | 58.65 |
| HORVU3Hr1G021600.2 | Barley | peroxisome, plasma membrane, vacuole | 52.73 | 58.64 |
| Bra012621.1-P | Field mustard | plasma membrane | 56.64 | 58.14 |
| KRH11119 | Soybean | plasma membrane | 56.33 | 57.82 |
| GSMUA_Achr2P20180_001 | Banana | plasma membrane | 43.83 | 57.54 |
| VIT_10s0003g02570.t01 | Wine grape | plasma membrane | 55.47 | 57.3 |
| VIT_10s0003g02550.t01 | Wine grape | cytosol, nucleus, peroxisome | 24.14 | 56.7 |
| KRH21125 | Soybean | plasma membrane | 55.7 | 56.54 |
| AT4G18050.2 | Thale cress | plasma membrane | 54.92 | 56.42 |
| CDY35168 | Canola | golgi, peroxisome, plasma membrane | 48.05 | 56.37 |
| PGSC0003DMT400007960 | Potato | plasma membrane | 55.08 | 55.86 |
| Solyc02g071350.2.1 | Tomato | plastid | 55.08 | 55.82 |
| VIT_10s0003g02580.t01 | Wine grape | plasma membrane | 54.53 | 55.18 |
| Solyc02g071340.1.1 | Tomato | plasma membrane | 53.98 | 54.71 |
| PGSC0003DMT400034908 | Potato | plasma membrane | 52.73 | 53.61 |
| AT5G46540.1 | Thale cress | golgi | 52.27 | 53.61 |
| HORVU1Hr1G017460.3 | Barley | plasma membrane | 53.67 | 53.55 |
| Solyc03g005860.2.1 | Tomato | plasma membrane | 52.34 | 53.22 |
| Bra017539.1-P | Field mustard | plasma membrane | 40.0 | 49.66 |
| HORVU6Hr1G067170.3 | Barley | endoplasmic reticulum, vacuole | 32.19 | 43.1 |
| HORVU3Hr1G117250.1 | Barley | mitochondrion | 3.59 | 41.44 |
| HORVU2Hr1G115180.1 | Barley | cytosol, peroxisome, plasma membrane | 40.86 | 41.18 |
| HORVU2Hr1G080200.1 | Barley | plasma membrane | 40.47 | 40.88 |
| HORVU6Hr1G067200.1 | Barley | plastid | 40.47 | 38.23 |
| HORVU3Hr1G068650.8 | Barley | peroxisome, plasma membrane | 36.48 | 37.94 |
| HORVU0Hr1G015570.6 | Barley | endoplasmic reticulum, plasma membrane | 31.95 | 37.49 |
| HORVU7Hr1G071870.33 | Barley | peroxisome | 35.94 | 36.28 |
| HORVU7Hr1G063020.3 | Barley | cytosol | 39.92 | 36.22 |
| HORVU4Hr1G058580.2 | Barley | cytosol, plasma membrane, plastid | 36.02 | 32.72 |
| HORVU3Hr1G117180.10 | Barley | plastid | 33.67 | 30.25 |
| HORVU4Hr1G077060.1 | Barley | mitochondrion, peroxisome, plastid | 32.19 | 29.62 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | UniProt:A0A287LDR1 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom |
| InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 |
| EnsemblPlantsGene:HORVU3Hr1G065240 | EnsemblPlants:HORVU3Hr1G065240.14 | InterPro:IPR003439 | InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase |
| PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 | PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24221 |
| PANTHER:PTHR24221:SF238 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 | TMHMM:TMhelix | UniParc:UPI000B47D6D0 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:497560615..497570767
Molecular Weight (calculated)
139383.0 Da
IEP (calculated)
7.549
GRAVY (calculated)
0.081
Length
1280 amino acids
Sequence
(BLAST)
(BLAST)
0001: EREEEEEEER ERDRVMDDEA MRGRGEEEVA EGRERKDAGA TTKKVPFFGM FRYASRADFA LMGVGTVAAM VNGVSEPLMT VVFAAVIESF GGSDNSAVLH
0101: RVSKVVMYYI YLGIGTAIAS FLRKSCWTVA GERQSARIRS LYLEAVLKQD VSFFDVEMTT GEAISRMSAD TVLVQDALGE KVGKYAQLLT TFVGGFVIGF
0201: IRGWMLALVM LACIPPSILS FATVSRLRAQ ISARRQASYD DAGNVVEQSI GAIRTVVSFN GEKKAIALYN ALIKKSYKAT VLEGLVTGLG IGCIFCVVFC
0301: NYSLAFWYGA KLIISKGYTG GQVINVVFAI LTGSVAIGNA SPSISAIAEG QSAAHRLFEI INRKPKIDIS DTSGIVLDDI KGDVELNNVF FRYPARPEQL
0401: ILNGLSLQVP SGTTMAIVGE SGSGKSTLIS LVERFYDPEA GEVLIDGINI KSLKLQWIRG KMSLVSQEPL LFMTSIKDNI TYGKEDATLE EIKRAAGLAN
0501: AANFIEKLPN AYETMVGQSG AQLSGGQKQR IAIARAILRS PKVLLLDEAT SALDVESERV VQEALNRIMV GITTLIVAHR LSTVRNADCI AVVHRGKVVE
0601: QGTHDQLIKD PDGAYCQLIQ LQQVHTEGTH EVPYASGSRL KSRSLSLEQS MRDSPRNRRQ QSIKSLGLPD SDNLHGHANT STQDHKEFDD SKVPKKAPIG
0701: RLFNLNKPEA PILLLAVIAA FVHGLLFPSF SIMMSGGIRT FYYPAQKLRK DSAFWALLCL LLGIISLIAI QLEFFLFGMA GGKLVERVRA LSFQSIMHQE
0801: VAWFDDPSNS SGALGARLFN DALNIRRLVG DNLAILVQCT ITLISGFAIA FASDWKLTLI VICVIPFLGL QNYIQVKFLK GFSEDAKVMY EDASQVVAEA
0901: IGSIRTVASF CAEKRVITMY SKKCQATMKQ GIRSGMVGGL GFSFSNLMLY LTYALCFYVG AQLVHDGKST FKDVFRVYFA LVFTAFGISQ TSAMASDSTK
1001: AQESTTSILA VIDRRSKIDP TSDEGIKLEK IDGNIDFNHV SFKYPSRPDV QVFNDFTLGI PSGKTTALVG ESGSGKSTVI ALLERFYDPD SGTISLDGIE
1101: IKNLTLSWLR DQMGLVSQEP VLFNDTIRAN IAYGKRGEAT EEEIITVAKA ANAHEFISSL PQGYNTNVGE RGTQLSGGQK QRVAIARAIL KDPRVLLLDE
1201: ATSALDAESE RIVQDALDKV MVSRTTIVVA HRLSTIKGAD TIAVIKDGSV AEKGKHESLM GIKGGVYASL VELHSKASAS
0101: RVSKVVMYYI YLGIGTAIAS FLRKSCWTVA GERQSARIRS LYLEAVLKQD VSFFDVEMTT GEAISRMSAD TVLVQDALGE KVGKYAQLLT TFVGGFVIGF
0201: IRGWMLALVM LACIPPSILS FATVSRLRAQ ISARRQASYD DAGNVVEQSI GAIRTVVSFN GEKKAIALYN ALIKKSYKAT VLEGLVTGLG IGCIFCVVFC
0301: NYSLAFWYGA KLIISKGYTG GQVINVVFAI LTGSVAIGNA SPSISAIAEG QSAAHRLFEI INRKPKIDIS DTSGIVLDDI KGDVELNNVF FRYPARPEQL
0401: ILNGLSLQVP SGTTMAIVGE SGSGKSTLIS LVERFYDPEA GEVLIDGINI KSLKLQWIRG KMSLVSQEPL LFMTSIKDNI TYGKEDATLE EIKRAAGLAN
0501: AANFIEKLPN AYETMVGQSG AQLSGGQKQR IAIARAILRS PKVLLLDEAT SALDVESERV VQEALNRIMV GITTLIVAHR LSTVRNADCI AVVHRGKVVE
0601: QGTHDQLIKD PDGAYCQLIQ LQQVHTEGTH EVPYASGSRL KSRSLSLEQS MRDSPRNRRQ QSIKSLGLPD SDNLHGHANT STQDHKEFDD SKVPKKAPIG
0701: RLFNLNKPEA PILLLAVIAA FVHGLLFPSF SIMMSGGIRT FYYPAQKLRK DSAFWALLCL LLGIISLIAI QLEFFLFGMA GGKLVERVRA LSFQSIMHQE
0801: VAWFDDPSNS SGALGARLFN DALNIRRLVG DNLAILVQCT ITLISGFAIA FASDWKLTLI VICVIPFLGL QNYIQVKFLK GFSEDAKVMY EDASQVVAEA
0901: IGSIRTVASF CAEKRVITMY SKKCQATMKQ GIRSGMVGGL GFSFSNLMLY LTYALCFYVG AQLVHDGKST FKDVFRVYFA LVFTAFGISQ TSAMASDSTK
1001: AQESTTSILA VIDRRSKIDP TSDEGIKLEK IDGNIDFNHV SFKYPSRPDV QVFNDFTLGI PSGKTTALVG ESGSGKSTVI ALLERFYDPD SGTISLDGIE
1101: IKNLTLSWLR DQMGLVSQEP VLFNDTIRAN IAYGKRGEAT EEEIITVAKA ANAHEFISSL PQGYNTNVGE RGTQLSGGQK QRVAIARAIL KDPRVLLLDE
1201: ATSALDAESE RIVQDALDKV MVSRTTIVVA HRLSTIKGAD TIAVIKDGSV AEKGKHESLM GIKGGVYASL VELHSKASAS
0001: MNGDGAREGD SVSHEPSTSK SPKEGEETKK EEKSEEKANT VPFYKLFAFA DSSDVLLMIC GSIGAIGNGM SLPFMTLLFG DLIDSFGKNQ NNKDIVDVVS
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
Arabidopsis Description
ABCB11ABC transporter B family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.