Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G258100.1 | Wheat | plasma membrane | 95.68 | 95.68 |
| HORVU3Hr1G065280.1 | Barley | plasma membrane | 94.64 | 93.74 |
| Os01t0695800-01 | Rice | plasma membrane | 18.16 | 86.64 |
| TraesCS3A01G258000.1 | Wheat | mitochondrion | 91.44 | 86.2 |
| Zm00001d011644_P002 | Maize | plasma membrane | 77.92 | 75.8 |
| TraesCS3A01G257500.1 | Wheat | plasma membrane | 70.88 | 70.49 |
| TraesCS3A01G258400.3 | Wheat | peroxisome | 67.6 | 67.17 |
| TraesCS2A01G009900.1 | Wheat | plasma membrane | 67.52 | 67.09 |
| TraesCS2A01G009600.1 | Wheat | plasma membrane | 66.72 | 66.56 |
| TraesCS1A01G368500.1 | Wheat | cytosol, peroxisome, plasma membrane | 63.12 | 62.37 |
| TraesCS3A01G369700.1 | Wheat | peroxisome | 63.68 | 62.19 |
| VIT_10s0003g02540.t01 | Wine grape | plasma membrane | 59.12 | 60.03 |
| Bra012621.1-P | Field mustard | plasma membrane | 59.28 | 59.42 |
| TraesCS5A01G495900.1 | Wheat | plasma membrane | 60.08 | 59.27 |
| VIT_10s0003g02570.t01 | Wine grape | plasma membrane | 58.72 | 59.24 |
| KRH21125 | Soybean | plasma membrane | 59.12 | 58.6 |
| GSMUA_Achr2P20180_001 | Banana | plasma membrane | 45.68 | 58.56 |
| TraesCS3A01G117600.3 | Wheat | peroxisome, plasma membrane | 54.24 | 58.35 |
| Solyc02g071350.2.1 | Tomato | plastid | 58.88 | 58.27 |
| PGSC0003DMT400007960 | Potato | plasma membrane | 58.48 | 57.92 |
| VIT_10s0003g02580.t01 | Wine grape | plasma membrane | 58.24 | 57.55 |
| AT4G18050.2 | Thale cress | plasma membrane | 57.2 | 57.38 |
| KRH11119 | Soybean | plasma membrane | 57.12 | 57.26 |
| CDY35168 | Canola | golgi, peroxisome, plasma membrane | 49.92 | 57.2 |
| Solyc02g071340.1.1 | Tomato | plasma membrane | 56.8 | 56.22 |
| VIT_10s0003g02550.t01 | Wine grape | cytosol, nucleus, peroxisome | 24.24 | 55.6 |
| TraesCS1A01G081300.1 | Wheat | unclear | 56.64 | 55.49 |
| PGSC0003DMT400034908 | Potato | plasma membrane | 55.52 | 55.12 |
| Solyc03g005860.2.1 | Tomato | plasma membrane | 55.04 | 54.65 |
| AT5G46540.1 | Thale cress | golgi | 54.24 | 54.33 |
| Bra017539.1-P | Field mustard | plasma membrane | 42.72 | 51.79 |
| TraesCS2A01G521400.2 | Wheat | cytosol, peroxisome, plasma membrane | 43.92 | 43.36 |
| TraesCS6A01G264900.3 | Wheat | golgi | 43.44 | 42.89 |
| TraesCS2A01G344300.1 | Wheat | cytosol, peroxisome, plasma membrane | 43.2 | 42.76 |
| TraesCS4A01G370600.1 | Wheat | plasma membrane | 39.68 | 40.26 |
| TraesCS7A01G284900.1 | Wheat | plasma membrane | 39.92 | 40.05 |
| TraesCS2A01G323900.1 | Wheat | plasma membrane | 39.28 | 38.78 |
| TraesCS7A01G303200.1 | Wheat | cytosol | 23.76 | 37.98 |
| TraesCS7A01G303100.1 | Wheat | peroxisome | 35.44 | 35.05 |
| TraesCS3A01G536300.1 | Wheat | cytosol, plasma membrane, vacuole | 38.64 | 34.48 |
| TraesCS4A01G101600.3 | Wheat | cytosol, plasma membrane, plastid | 38.16 | 33.85 |
| TraesCS4A01G006900.1 | Wheat | peroxisome | 38.48 | 32.17 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 |
| InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 |
| PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF272 | SMART:SM00382 | SUPFAM:SSF52540 |
| SUPFAM:SSF90123 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3A01G258200 | EnsemblPlants:TraesCS3A01G258200.1 | TIGR:cd03249 | SEG:seg |
Description
No Description!
Coordinates
chr3A:+:480046032..480052283
Molecular Weight (calculated)
135207.0 Da
IEP (calculated)
8.011
GRAVY (calculated)
0.128
Length
1250 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDATAEASSG GKGDRPEKKV PLLDMFRYAD RLDVLLMAVG SLGAVANGVS EPLISILFGD VINSFGQSTT STVLRAVTKV CLNFIYLGVA AAVASFLQVS
0101: CWTMAGERHS SRIRSLYLKS VLRQDIAFFD TQMTTGEAVS RMSSDTVMIQ DALGEKAGKL VQHTSAFFGG FIIAFTKGWL LTLAMLTSLP LIAIAGSVSA
0201: QLLTRVSSKR LTSYSDAADT VELTIGSIRT VVSFNGEKKA IEMYNKFIKN AYMTVVEEGL VSGFGMGSVF CIIFSSYGLA FWYGGKLIID KGYTGGKIIT
0301: VLFAVLTGAT SLGNATPSIS AIVGGQSAAY RLFETIERKP GIDSDDTSGI VLENIKGDIE IKDVHFSYPA RPEQLVLDGL SLQVASGTTM AIVGESGSGK
0401: STVISLVERF YDPQAGEVLI DGVNIKNLNL DWIRGKIGLV SQEPSLFMTS IKDNIIYGKE DATLEEIKRA AELANAASFI DKLPNGYNTL VGQHGTLLSG
0501: GQKQRIAIAR AILKDPKILL LDEATSALDV ESERIVQEAL NRIMVERTTL IVAHRLSTVR NVDCITVVHQ GKIVEQGPHQ ALVKDPGGAY SQLIRLQETH
0601: GNERRKIQDP GVPNSLLKST TLSIRRSVTK DSFGNSNRYS FRSDESHEDE IIGKQNKEDL PDGKTLQKAP IGRLFNLNKP EVPFLLLGVI AASVHGIIFP
0701: LFGILMSGVI KSFYEPPDKL RKDSSFWALI AVVLGVAAFI AIPAEYLLFG IAGGKLIERV RTLSFQNIVH QEIAWFDNPS NSSGALGTRL SVDALNVRRL
0801: VGDNLGIIVQ STAAIITGFL IAFTADWRLA LIITCVIPLV GAQGYAQVKF FKGFSEEAKE MYEDASQVAT DAVSSIRTIA SFCAEKRVVT TYNKKCEALR
0901: KQGIRTGIVG GLGFGFSLLV LYLTYALCFY VGAKFVRQGK TTFADVFKVF FALVLAAVGV SQASALASNA TKATHSAISV FSILDRKSKI DTSSDEGLML
1001: DNVNGDIDFS NVSFKYPSRP DVQIFSDFTL HIPSRKTIAL VGESGSGKST IIALLERFYD PDSGRISVDG VEIKSLRISW LRDQMGLVGQ EPVLFNDTIR
1101: ANITYGKNGE ATNEEVTAAA NAANAHEFIS SLPHGYNTPV GEKGVQLSGG QKQRVAIARA IIKDPKILLL DEATSALDAE SERIVQDALD RVMVSRTTIV
1201: VAHRLSTIKG ADMIAVIKEG KIAEKGKHEA LVRIKDGVYA SLLELRYNSE
0101: CWTMAGERHS SRIRSLYLKS VLRQDIAFFD TQMTTGEAVS RMSSDTVMIQ DALGEKAGKL VQHTSAFFGG FIIAFTKGWL LTLAMLTSLP LIAIAGSVSA
0201: QLLTRVSSKR LTSYSDAADT VELTIGSIRT VVSFNGEKKA IEMYNKFIKN AYMTVVEEGL VSGFGMGSVF CIIFSSYGLA FWYGGKLIID KGYTGGKIIT
0301: VLFAVLTGAT SLGNATPSIS AIVGGQSAAY RLFETIERKP GIDSDDTSGI VLENIKGDIE IKDVHFSYPA RPEQLVLDGL SLQVASGTTM AIVGESGSGK
0401: STVISLVERF YDPQAGEVLI DGVNIKNLNL DWIRGKIGLV SQEPSLFMTS IKDNIIYGKE DATLEEIKRA AELANAASFI DKLPNGYNTL VGQHGTLLSG
0501: GQKQRIAIAR AILKDPKILL LDEATSALDV ESERIVQEAL NRIMVERTTL IVAHRLSTVR NVDCITVVHQ GKIVEQGPHQ ALVKDPGGAY SQLIRLQETH
0601: GNERRKIQDP GVPNSLLKST TLSIRRSVTK DSFGNSNRYS FRSDESHEDE IIGKQNKEDL PDGKTLQKAP IGRLFNLNKP EVPFLLLGVI AASVHGIIFP
0701: LFGILMSGVI KSFYEPPDKL RKDSSFWALI AVVLGVAAFI AIPAEYLLFG IAGGKLIERV RTLSFQNIVH QEIAWFDNPS NSSGALGTRL SVDALNVRRL
0801: VGDNLGIIVQ STAAIITGFL IAFTADWRLA LIITCVIPLV GAQGYAQVKF FKGFSEEAKE MYEDASQVAT DAVSSIRTIA SFCAEKRVVT TYNKKCEALR
0901: KQGIRTGIVG GLGFGFSLLV LYLTYALCFY VGAKFVRQGK TTFADVFKVF FALVLAAVGV SQASALASNA TKATHSAISV FSILDRKSKI DTSSDEGLML
1001: DNVNGDIDFS NVSFKYPSRP DVQIFSDFTL HIPSRKTIAL VGESGSGKST IIALLERFYD PDSGRISVDG VEIKSLRISW LRDQMGLVGQ EPVLFNDTIR
1101: ANITYGKNGE ATNEEVTAAA NAANAHEFIS SLPHGYNTPV GEKGVQLSGG QKQRVAIARA IIKDPKILLL DEATSALDAE SERIVQDALD RVMVSRTTIV
1201: VAHRLSTIKG ADMIAVIKEG KIAEKGKHEA LVRIKDGVYA SLLELRYNSE
0001: MNGDGAREGD SVSHEPSTSK SPKEGEETKK EEKSEEKANT VPFYKLFAFA DSSDVLLMIC GSIGAIGNGM SLPFMTLLFG DLIDSFGKNQ NNKDIVDVVS
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
Arabidopsis Description
ABCB11ABC transporter B family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.