Factsheet for Bra025331.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025328.1-P	Field mustard	endoplasmic reticulum, golgi	81.56	86.9
AT3G28390.1	Thale cress	plasma membrane	78.4	72.9
AT3G28360.1	Thale cress	plasma membrane	76.56	71.01
Bra025326.1-P	Field mustard	plasma membrane	73.66	67.44
VIT_14s0066g02320.t01	Wine grape	peroxisome	65.14	64.13
Bra032855.1-P	Field mustard	cytosol	6.41	61.86
Os02t0189800-00	Rice	mitochondrion	38.72	58.96
VIT_19s0085g00060.t01	Wine grape	endoplasmic reticulum, plasma membrane, plastid	61.72	57.39
Os02t0190300-01	Rice	plasma membrane	62.51	57.19
OQU84543	Sorghum	endoplasmic reticulum, plasma membrane	61.81	56.96
Zm00001d053706_P002	Maize	mitochondrion, plasma membrane	62.07	56.88
TraesCS4A01G370600.1	Wheat	plasma membrane	60.4	55.84
TraesCS7D01G068400.1	Wheat	plasma membrane	60.32	55.76
Os02t0190000-00	Rice	plasma membrane	60.84	55.75
EES05229	Sorghum	plasma membrane	57.59	52.73
Zm00001d016794_P001	Maize	plasma membrane	57.59	52.23
Bra025425.1-P	Field mustard	peroxisome, plasma membrane, vacuole	47.06	43.19
Bra039042.1-P	Field mustard	plasma membrane	44.69	40.66
Bra025359.1-P	Field mustard	plasma membrane	44.16	40.18
Bra032856.1-P	Field mustard	plasma membrane	42.23	38.82
Bra013936.1-P	Field mustard	plasma membrane	41.53	38.33
Bra012621.1-P	Field mustard	plasma membrane	41.53	37.93
Bra019135.1-P	Field mustard	plasma membrane	40.39	37.07
Bra019907.1-P	Field mustard	plasma membrane	39.16	36.41
Bra023087.1-P	Field mustard	cytosol, nucleus, plasma membrane	42.49	36.15
Bra002094.1-P	Field mustard	cytosol, peroxisome, plasma membrane	38.98	36.07
Bra003490.1-P	Field mustard	cytosol, nucleus, plasma membrane	40.91	36.07
Bra017216.1-P	Field mustard	cytosol, nucleus, plasma membrane	41.97	35.73
Bra003445.1-P	Field mustard	peroxisome	39.24	35.65
Bra040475.1-P	Field mustard	cytosol	40.21	35.59
Bra004484.1-P	Field mustard	cytosol	39.86	35.36
Bra030503.1-P	Field mustard	cytosol, peroxisome, plasma membrane	39.51	35.27
Bra033331.1-P	Field mustard	cytosol, nucleus, plasma membrane	39.16	35.23
Bra017539.1-P	Field mustard	plasma membrane	29.76	32.88
Bra005036.1-P	Field mustard	mitochondrion	37.93	30.68
Bra000136.1-P	Field mustard	cytosol, mitochondrion, peroxisome	37.58	30.51
Bra014756.1-P	Field mustard	cytosol, golgi, peroxisome	36.87	30.0
GSMUA_Achr1P18340_001	Banana	plasma membrane	54.35	29.59

Protein Annotations

MapMan:24.1.3.1.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	EnsemblPlantsGene:Bra025331	EnsemblPlants:Bra025331.1	EnsemblPlants:Bra025331.1-P	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626
GO:GO:0055085	InterPro:IPR003439	InterPro:IPR011527	InterPro:IPR036640	UniProt:M4E975	InterPro:P-loop_NTPase
PFAM:PF00005	PFAM:PF00664	ScanProsite:PS00211	PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24221
PANTHER:PTHR24221:SF381	SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF90123	TMHMM:TMhelix	UniParc:UPI000253FBC3
SEG:seg	:	:	:	:	:

Description

AT3G28390 (E=0.0) PGP18 | PGP18 (P-GLYCOPROTEIN 18); ATPase, coupled to transmembrane movement of substances

Coordinates

chrA06:+:22118736..22123100

Molecular Weight (calculated)

124702.0 Da

IEP (calculated)

9.104

GRAVY (calculated)

0.153

Length

1139 amino acids

Sequence
(BLAST)

0001: MTSWASIRSI FMHADGVDWM LMGLFGAVAD GFITPIYLLI IGLLLNDLGG SSSDRTFMKA ISKLPNFLMN VSAFFASYIV GFIMLWRLTI VGFPFIVILL
0101: IPGLMYGRTL IGISRKIREE YNEAGSIAEQ AISLVRTVYA FGSETKLIAR FSVALQSSVK LGLRQGIVKG ISLGSNGIIY AIWGFMTWYG SRMVMDHGAK
0201: GGTVFAVISC VTFGGTSLGQ GLLNLKYFSD AVVAGERVTK VVKRVPDIDS NNMEGQILEN IKGEVQFKHV KFMYPSRPET LILGDLCLRI PSGKTVALVG
0301: GSGSGKSTVI SLLQRFYDPV AGEVLIDGVP INRLMVKWLR SQMGLVSQEP VLFATSIKEN ILFGKEDASM DEVVEAAKAS NAHTFISQFP HDYNTQKQRI
0401: AIARTMIKSP KILLLDEATS ALDSESERVV QEALDKASLG RTTIVIAHRL STIRNADVIC VVHNGRIVET GSHEELMENL DGHYTSLVRL QQMENEESDV
0501: NISVRVQGGQ LSILSKDLKY SPKLSIDSGS NLLTKSSTDS NTPGLIPKDK KLHVPSFKRL MGMNRPEWKH AISGCLSAAL YGTVQPINAY VSGSMVSLYF
0601: LTNHEEIREK TRIYVLGFVG LALFVFLTNI VQHYSFAYMG ESLTKRIREK MLSKILTFEV NWFDENENSS GAVCSRLAKE ANLVRSLIGE RLSLLVQTIS
0701: GVTLACTLGL VIAWRLAIVM IVTQPVVVAC FYTQSILLKS MSKRAIKAQD ESSKLAAEAV SNIRTIIAFS SQERILKLLK RVQDGPRKES VRQSWLAGIV
0801: LGTSRSLLTC TGVLNYWYGG RLIADGKIAA KAFFEMFMIF VSTGRAIAEA ATMTTDSAKG SDAVGSVFAV LDRCTTIEPE DPNGYLPEKI KGLISFVNVD
0901: FAYPTRPNAV IFKDFSIEIE EGKSTAIVGP SGSGKSTIIS LIERFYDPLK GSVRIDGRDL KSYNLRSLRR HIALVSQEPA LFAGTVRENI MYGAASENID
1001: ESEIIEVAKA ANAHEFITSL SNGYDTICGA RGLQLSGGQK QRIAIARAVL KNPSVLLLDE ATSALDSQSE RLVQDALERV MVGRTSVVIA HRLSTIQNCN
1101: VIAVWDKGKV VECGDHSSLL AKGPTGAYFS LVNLQRNLC

Best Arabidopsis Sequence Match ( AT3G28415.1 )
(BLAST)

0001: MKSFGSVRSI FMHANSVDLV LMGLGLIGAV GDGFITPIIF FITGLLLNDI GDSSFGDKTF MHAIMKNAVA LLYVAGASLV ICFVGERQAS RMREKYLRAV
0101: LRQDVGYFDL HVTSTSDVIT SVSSDTLVIQ DVLSEKLPNF LMSASAFVAS YIVGFIMLWR LTIVGFPFFI LLLIPGLMCG RALINISRKI REEYNEAGSI
0201: AEQAISLVRT VYAFGSERKM ISKFSAALEG SVKLGLRQGI AKGIAIGSNG VTYAIWGFMT WYGSRMVMYH GAKGGTIFAV IICITYGGTS LGRGLSNLKY
0301: FSEAVVAGER IIEVIKRVPD IDSDNPRGQV LENIKGEVQF KHVKFMYSSR PETPIFDDLC LRIPSGKSVA LVGGSGSGKS TVISLLQRFY DPIVGEILID
0401: GVSIKKLQVK WLRSQMGLVS QEPALFATSI EENILFGKED ASFDEVVEAA KSSNAHDFIS QFPLGYKTQV GERGVQMSGG QKQRISIARA IIKSPTLLLL
0501: DEATSALDSE SERVVQEALD NATIGRTTIV IAHRLSTIRN VDVICVFKNG QIVETGSHEE LMENVDGQYT SLVRLQIMEN EESNDNVSVS MREGQFSNFN
0601: KDVKYSSRLS IQSRSSLFAT SSIDTNLAGS IPKDKKPSFK RLMAMNKPEW KHALYGCLSA VLYGALHPIY AYASGSMVSV YFLTSHDEMK EKTRIYVLLF
0701: VGLAVLCFLI SIIQQYSFAY MGEYLTKRIR ENILSKLLTF EVSWFDEDEN SSGSICSRLA KDANVVRSLV GERVSLLVQT ISAVSVACTL GLAISWKLSI
0801: VMIAIQPVVV GCFYTQRIVL KSISKKAIKA QDESSKLAAE AVSNIRTITA FSSQERILKL LKMVQEGPQR ENIRQSWLAG IVLATSRSLM TCTSALNYWY
0901: GARLIIDGKI TSKAFFELFI LFVSTGRVIA DAGAMTMDLA KGSDAVGSVF AVLDRYTNIE PEKPDGFVPQ NIKGQIKFVN VDFAYPTRPD VIIFKNFSID
1001: IDEGKSTAIV GPSGSGKSTI IGLIERFYDP LKGIVKIDGR DIRSYHLRSL RQHIGLVSQE PILFAGTIRE NIMYGGASDK IDESEIIEAA KAANAHDFIV
1101: TLSDGYDTYC GDRGVQLSGG QKQRIAIARA VLKNPSVLLL DEATSALDNQ SERMVQDALG RLMVGRTSVV IAHRLSTIQN CDTITVLDKG KVVECGTHSS
1201: LLAKGPTGVY FSLVSLQRTR Y

Arabidopsis Description

ABCB22ABC transporter B family member 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSJ2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.