Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g064120.1.1 | Tomato | plasma membrane | 98.25 | 98.25 |
| PGSC0003DMT400027962 | Potato | golgi, plasma membrane, vacuole | 63.07 | 63.32 |
| PGSC0003DMT400011703 | Potato | cytosol | 8.26 | 62.28 |
| PGSC0003DMT400013988 | Potato | plasma membrane | 56.71 | 58.24 |
| TraesCS2D01G339000.1 | Wheat | plasma membrane | 52.26 | 52.1 |
| TraesCS2A01G323900.1 | Wheat | plasma membrane | 52.26 | 51.97 |
| TraesCS2B01G358200.1 | Wheat | plasma membrane | 52.1 | 51.86 |
| Os04t0481700-01 | Rice | plasma membrane | 26.93 | 50.6 |
| PGSC0003DMT400048379 | Potato | golgi, peroxisome, plasma membrane | 44.4 | 49.16 |
| PGSC0003DMT400003590 | Potato | plasma membrane | 42.89 | 43.23 |
| PGSC0003DMT400009924 | Potato | peroxisome | 43.76 | 41.34 |
| PGSC0003DMT400045176 | Potato | peroxisome | 40.67 | 40.73 |
| PGSC0003DMT400034908 | Potato | plasma membrane | 40.11 | 40.11 |
| PGSC0003DMT400007960 | Potato | plasma membrane | 39.4 | 39.3 |
| PGSC0003DMT400018812 | Potato | cytosol, peroxisome, plasma membrane | 37.73 | 39.19 |
| PGSC0003DMT400018820 | Potato | cytosol, peroxisome, plasma membrane | 39.87 | 39.01 |
| PGSC0003DMT400011930 | Potato | peroxisome | 39.16 | 38.31 |
| PGSC0003DMT400019085 | Potato | plasma membrane | 38.2 | 37.17 |
| PGSC0003DMT400069516 | Potato | peroxisome | 34.55 | 36.68 |
| PGSC0003DMT400058977 | Potato | plastid | 38.68 | 31.89 |
Protein Annotations
| EntrezGene:102600416 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 |
| InterPro:IPR011527 | InterPro:IPR036640 | UniProt:M1BNZ5 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 |
| EnsemblPlantsGene:PGSC0003DMG400019259 | PGSC:PGSC0003DMG400019259 | EnsemblPlants:PGSC0003DMT400049576 | ScanProsite:PS00211 | PFscan:PS50893 | PFscan:PS50929 |
| PANTHER:PTHR24221 | PANTHER:PTHR24221:SF245 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 | TMHMM:TMhelix |
| UniParc:UPI000296E8E4 | RefSeq:XP_006360088.1 | SEG:seg | : | : | : |
Description
Multidrug/pheromone exporter, MDR family, ABC transporter family [Source:PGSC_GENE;Acc:PGSC0003DMG400019259]
Coordinates
chr7:+:54289854..54295427
Molecular Weight (calculated)
137946.0 Da
IEP (calculated)
9.224
GRAVY (calculated)
0.019
Length
1259 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGGNNKQGMF RFADKKDKLL MFFGTLGSMG DGLQIPLMMF VLSDVINDYG NLSNSVSMKT VNKYSLRLLY VAFGVGLAAF VEGLCWARTA ERQTSRMRLE
0101: YLKSVLRQEV GFFDTQAAES STTYQVISTV SADSTTIQIT IGEKIPDCLA YMSSFLFCHI FAFLLSWKIT LAAIPFTLMF IIPGLGFGTM MMNVGMQMIE
0201: SYGVAGGIAE QAISSIRTLY SYVAENQTLE KFSQSLQKVM ELGIKQGFAR GLLLGSLGMV YISWAFQAWL GSILVSKHGE KGGDVFVAGF NVLMGGLNIL
0301: SALPNLTAIT EAKSAAIRIT EMIDRQPAID TEDKKGKALS YVRGEIEFNG VYFSYPSRPD TPILQGLNLR ISPGKTTGLV GGSGSGKSTI ISLLQRFYDP
0401: IEGDISLDGH KIKKLHIKWL RSQIGLVNQE PILFATTIKE NILFGKEGAT MEEVEKATKA ANAHDFIIKL PDAYETQVGQ FGLQLSGGQK QRIAIARALI
0501: RDPKVLLLDE ATSALDSQSE RVVQQALDHA SMGRTAIVIA HRLSTIRMAN RIVVLQQGRV IESGTHEELM QMTDGEGGEY YKMVQLQQLA TLNDVANTPN
0601: QKTGGRSSYR KGSNTPQSPF NMISSAAATP VMYSFSPAFS RSTPLSVPYS VQYEESYDSY DNHSTKEAHP APSQLRLLQM NAPEWGRALL GCIGAIGSGA
0701: VQPINAYCVG AVISVYFRPD KSSIQSHARI YSFIFIGLAV FNFFTNVIQH YNFAVMGERL TRRIREMLLA KLMTFEIKWF DQDENTSAAI CARLSTEANM
0801: VRSLVGDRMS LLAQAFFAAT FAYTLGLFLT WKLSLVMMAA QPLLIGSFYA RTVLMKSMSV KAQKAQREGS QLASEAVINH RTITAFSSQK RIVGLFRDSL
0901: EGPRKESIRQ SWYAGIGLCS SQFLAAASTA LAYWYGGKLL SQGDISPEKL FQAFLALLFT AYTIAEAGSM TKDISRGNNA VGSVFAILDR NTEINPDNSS
1001: AIDATRTQIR GRVELKRLFF AYPSRPDQLI FRGLSLKISA GTTVALVGQS GCGKSTIIGL IERFYDPDKG SVYIDERDVK DYNLRSLRQS IALVSQEPTL
1101: FAGTIYENIA YGKENASESE IIKAAVLANA HEFISGMNDG YETQCGQRGV QLSGGQKQRI AIARAILKSP KILLLDEATS ALDTVSESAV QEALEKMMVG
1201: RTCIVVAHRL STIQKASSIA VIKDGIVAEQ GSHSDLLSIG KYGSYYSLVK LQGGNSPYR
0101: YLKSVLRQEV GFFDTQAAES STTYQVISTV SADSTTIQIT IGEKIPDCLA YMSSFLFCHI FAFLLSWKIT LAAIPFTLMF IIPGLGFGTM MMNVGMQMIE
0201: SYGVAGGIAE QAISSIRTLY SYVAENQTLE KFSQSLQKVM ELGIKQGFAR GLLLGSLGMV YISWAFQAWL GSILVSKHGE KGGDVFVAGF NVLMGGLNIL
0301: SALPNLTAIT EAKSAAIRIT EMIDRQPAID TEDKKGKALS YVRGEIEFNG VYFSYPSRPD TPILQGLNLR ISPGKTTGLV GGSGSGKSTI ISLLQRFYDP
0401: IEGDISLDGH KIKKLHIKWL RSQIGLVNQE PILFATTIKE NILFGKEGAT MEEVEKATKA ANAHDFIIKL PDAYETQVGQ FGLQLSGGQK QRIAIARALI
0501: RDPKVLLLDE ATSALDSQSE RVVQQALDHA SMGRTAIVIA HRLSTIRMAN RIVVLQQGRV IESGTHEELM QMTDGEGGEY YKMVQLQQLA TLNDVANTPN
0601: QKTGGRSSYR KGSNTPQSPF NMISSAAATP VMYSFSPAFS RSTPLSVPYS VQYEESYDSY DNHSTKEAHP APSQLRLLQM NAPEWGRALL GCIGAIGSGA
0701: VQPINAYCVG AVISVYFRPD KSSIQSHARI YSFIFIGLAV FNFFTNVIQH YNFAVMGERL TRRIREMLLA KLMTFEIKWF DQDENTSAAI CARLSTEANM
0801: VRSLVGDRMS LLAQAFFAAT FAYTLGLFLT WKLSLVMMAA QPLLIGSFYA RTVLMKSMSV KAQKAQREGS QLASEAVINH RTITAFSSQK RIVGLFRDSL
0901: EGPRKESIRQ SWYAGIGLCS SQFLAAASTA LAYWYGGKLL SQGDISPEKL FQAFLALLFT AYTIAEAGSM TKDISRGNNA VGSVFAILDR NTEINPDNSS
1001: AIDATRTQIR GRVELKRLFF AYPSRPDQLI FRGLSLKISA GTTVALVGQS GCGKSTIIGL IERFYDPDKG SVYIDERDVK DYNLRSLRQS IALVSQEPTL
1101: FAGTIYENIA YGKENASESE IIKAAVLANA HEFISGMNDG YETQCGQRGV QLSGGQKQRI AIARAILKSP KILLLDEATS ALDTVSESAV QEALEKMMVG
1201: RTCIVVAHRL STIQKASSIA VIKDGIVAEQ GSHSDLLSIG KYGSYYSLVK LQGGNSPYR
0001: MMKSFGSIRS IFMHADGVDW MLMALGLIGA VGDGFITPII FFICSKLLNN VGGSSFDDET FMQTVAKNAV ALVYVACASW VICFIEGYCW TRTGERQAAK
0101: MREKYLKAVL RQDVGYFDLH VTSTSDVITS VSSDSLVIQD FLSEKLPNFL MNTSAFVASY IVGFLLLWRL TIVGFPFIIL LLIPGLMYGR ALIRISMKIR
0201: EEYNEAGSIA EQVISSVRTV YAFGSEKKMI EKFSTALQGS VKLGLRQGLA KGIAIGSNGI TYAIWGFLTW YGSRMVMNHG SKGGTVSSVI VCVTFGGTSL
0301: GQSLSNLKYF SEAFVVGERI MKVINRVPGI DSDNLEGQIL EKTRGEVEFN HVKFTYPSRP ETPIFDDLCL RVPSGKTVAL VGGSGSGKST VISLLQRFYD
0401: PIAGEILIDG LPINKLQVKW LRSQMGLVSQ EPVLFATSIK ENILFGKEDA SMDEVVEAAK ASNAHSFISQ FPNSYQTQVG ERGVQLSGGQ KQRIAIARAI
0501: IKSPIILLLD EATSALDSES ERVVQEALDN ASIGRTTIVI AHRLSTIRNA DVICVVHNGR IIETGSHEEL LEKLDGQYTS LVRLQQVDNK ESDHISVEEG
0601: QASSLSKDLK YSPKEFIHST SSNIVRDFPN LSPKDGKSLV PSFKRLMSMN RPEWKHALYG CLGAALFGAV QPIYSYSSGS MVSVYFLASH DQIKEKTRIY
0701: VLLFVGLALF TFLSNISQHY GFAYMGEYLT KRIRERMLGK ILTFEVNWFD KDENSSGAIC SRLAKDANMV RSLVGDRMSL LVQTISAVSI TCAIGLVISW
0801: RFSIVMMSVQ PVIVVCFYTQ RVLLKSMSRN AIKGQDESSK LAAEAVSNIR TITAFSSQER IINLLKMVQE GPRKDSARQS WLAGIMLGTS QSLITCVSAL
0901: NFWYGGKLIA DGKMMSKEFL EIFLIFASTG RVIAEAGTMT KDLVKGSDAV ASVFAVLDRN TTIEPENPDG YVPKKVKGQI SFSNVDFAYP TRPDVIIFQN
1001: FSIDIEDGKS TAIVGPSGSG KSTIISLIER FYDPLKGIVK IDGRDIRSCH LRSLRQHIAL VSQEPTLFAG TIRENIMYGG ASNKIDESEI IEAAKAANAH
1101: DFITSLSNGY DTCCGDRGVQ LSGGQKQRIA IARAVLKNPS VLLLDEATSA LDSQSESVVQ DALERLMVGR TSVVIAHRLS TIQKCDTIAV LENGAVVECG
1201: NHSSLLAKGP KGAYFSLVSL QRTLF
0101: MREKYLKAVL RQDVGYFDLH VTSTSDVITS VSSDSLVIQD FLSEKLPNFL MNTSAFVASY IVGFLLLWRL TIVGFPFIIL LLIPGLMYGR ALIRISMKIR
0201: EEYNEAGSIA EQVISSVRTV YAFGSEKKMI EKFSTALQGS VKLGLRQGLA KGIAIGSNGI TYAIWGFLTW YGSRMVMNHG SKGGTVSSVI VCVTFGGTSL
0301: GQSLSNLKYF SEAFVVGERI MKVINRVPGI DSDNLEGQIL EKTRGEVEFN HVKFTYPSRP ETPIFDDLCL RVPSGKTVAL VGGSGSGKST VISLLQRFYD
0401: PIAGEILIDG LPINKLQVKW LRSQMGLVSQ EPVLFATSIK ENILFGKEDA SMDEVVEAAK ASNAHSFISQ FPNSYQTQVG ERGVQLSGGQ KQRIAIARAI
0501: IKSPIILLLD EATSALDSES ERVVQEALDN ASIGRTTIVI AHRLSTIRNA DVICVVHNGR IIETGSHEEL LEKLDGQYTS LVRLQQVDNK ESDHISVEEG
0601: QASSLSKDLK YSPKEFIHST SSNIVRDFPN LSPKDGKSLV PSFKRLMSMN RPEWKHALYG CLGAALFGAV QPIYSYSSGS MVSVYFLASH DQIKEKTRIY
0701: VLLFVGLALF TFLSNISQHY GFAYMGEYLT KRIRERMLGK ILTFEVNWFD KDENSSGAIC SRLAKDANMV RSLVGDRMSL LVQTISAVSI TCAIGLVISW
0801: RFSIVMMSVQ PVIVVCFYTQ RVLLKSMSRN AIKGQDESSK LAAEAVSNIR TITAFSSQER IINLLKMVQE GPRKDSARQS WLAGIMLGTS QSLITCVSAL
0901: NFWYGGKLIA DGKMMSKEFL EIFLIFASTG RVIAEAGTMT KDLVKGSDAV ASVFAVLDRN TTIEPENPDG YVPKKVKGQI SFSNVDFAYP TRPDVIIFQN
1001: FSIDIEDGKS TAIVGPSGSG KSTIISLIER FYDPLKGIVK IDGRDIRSCH LRSLRQHIAL VSQEPTLFAG TIRENIMYGG ASNKIDESEI IEAAKAANAH
1101: DFITSLSNGY DTCCGDRGVQ LSGGQKQRIA IARAVLKNPS VLLLDEATSA LDSQSESVVQ DALERLMVGR TSVVIAHRLS TIQKCDTIAV LENGAVVECG
1201: NHSSLLAKGP KGAYFSLVSL QRTLF
Arabidopsis Description
ABCB18ABC transporter B family member 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSJ5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.