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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • plastid 3
  • cytosol 2
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:nucleus
ChloroP:plastid
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:cytosol, plasma membrane
PProwler:secretory
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d008178_P001 Maize cytosol, peroxisome, plasma membrane, plastid 96.02 96.17
Zm00001d040562_P002 Maize cytosol, peroxisome, plasma membrane 95.94 91.98
OQU77362 Sorghum mitochondrion, plasma membrane 77.27 85.7
GSMUA_Achr8P29860_001 Banana endoplasmic reticulum 66.8 77.31
PGSC0003DMT400011703 Potato cytosol 9.77 74.85
GSMUA_Achr1P25070_001 Banana plasma membrane 52.11 73.62
VIT_07s0005g02660.t01 Wine grape cytosol, peroxisome, plasma membrane 71.41 70.47
KRH69152 Soybean cytosol, peroxisome, plasma membrane 69.92 69.81
KRH33644 Soybean cytosol, peroxisome, plasma membrane 69.61 69.5
CDY25095 Canola cytosol 65.39 69.4
PGSC0003DMT400018820 Potato cytosol, peroxisome, plasma membrane 69.77 69.39
CDX67881 Canola cytosol 64.84 69.11
KRH19486 Soybean cytosol, peroxisome, plasma membrane 68.59 68.92
CDY48003 Canola cytosol 63.83 68.54
CDY27510 Canola cytosol 63.98 68.31
CDX80072 Canola cytosol 63.75 68.11
KRH02481 Soybean plasma membrane 67.73 68.0
VIT_05s0020g00890.t01 Wine grape cytosol, peroxisome, plasma membrane 68.67 67.93
CDY51307 Canola cytosol, peroxisome, plasma membrane 67.03 67.88
CDY15432 Canola cytosol 64.61 67.57
Bra030503.1-P Field mustard cytosol, peroxisome, plasma membrane 67.11 67.32
AT1G02520.1 Thale cress cytosol, peroxisome, plasma membrane 67.19 67.29
KRH68334 Soybean cytosol, peroxisome, plasma membrane 67.34 67.19
AT3G62150.2 Thale cress cytosol, nucleus, plasma membrane 67.97 67.13
AT2G47000.1 Thale cress cytosol, peroxisome, plasma membrane 67.42 67.11
Bra003490.1-P Field mustard cytosol, nucleus, plasma membrane 67.73 67.11
CDY37776 Canola cytosol, peroxisome, plasma membrane 65.16 67.1
Solyc06g009280.1.1 Tomato cytosol, peroxisome, plasma membrane 67.5 67.03
CDX89963 Canola cytosol, nucleus, plasma membrane 66.17 67.01
Bra004484.1-P Field mustard cytosol 67.03 66.82
CDY15249 Canola cytosol, peroxisome, plasma membrane 66.02 66.54
Bra040475.1-P Field mustard cytosol 66.8 66.43
Bra033331.1-P Field mustard cytosol, nucleus, plasma membrane 65.23 65.96
AT4G01830.1 Thale cress golgi, plasma membrane, vacuole 63.28 65.85
PGSC0003DMT400018812 Potato cytosol, peroxisome, plasma membrane 62.27 65.76
CDY24379 Canola plasma membrane 59.92 65.61
AT4G01820.1 Thale cress peroxisome, plasma membrane, vacuole 62.89 65.5
Bra002094.1-P Field mustard cytosol, peroxisome, plasma membrane 62.27 64.74
CDY20842 Canola endoplasmic reticulum, golgi, plasma membrane 59.22 64.68
Solyc06g009290.2.1 Tomato nucleus 69.77 63.79
KRH02482 Soybean cytosol, peroxisome, plasma membrane 64.77 63.62
Bra003445.1-P Field mustard peroxisome 62.03 63.32
CDY58790 Canola peroxisome 60.23 62.63
KRH19480 Soybean plasma membrane 58.75 62.35
CDY51560 Canola peroxisome 60.31 61.71
KRH02484 Soybean plasma membrane 60.31 60.98
KXG33192 Sorghum cytosol 60.08 60.6
Solyc12g098840.1.1 Tomato peroxisome 60.23 60.23
PGSC0003DMT400011930 Potato peroxisome 59.77 59.44
KRH19479 Soybean plasma membrane 60.16 59.28
KXG35311 Sorghum plasma membrane 56.95 58.09
KXG32655 Sorghum peroxisome 58.2 57.71
Solyc11g067300.1.1 Tomato plasma membrane 55.47 56.35
EES01319 Sorghum cytosol 54.45 54.71
PGSC0003DMT400019085 Potato plasma membrane 53.98 53.4
EES12287 Sorghum cytosol, peroxisome, plasma membrane 43.91 44.53
EES12952 Sorghum cytosol, peroxisome, plasma membrane 43.91 44.39
EES05688 Sorghum plasma membrane 43.59 44.29
OQU84543 Sorghum endoplasmic reticulum, plasma membrane 40.39 41.83
EES05229 Sorghum plasma membrane 40.0 41.16
OQU78384 Sorghum plasma membrane 56.56 38.39
OQU79902 Sorghum nucleus, peroxisome, plasma membrane 36.88 37.46
OQU79903 Sorghum peroxisome 37.03 37.41
KXG34231 Sorghum cytosol, plasma membrane, vacuole 38.52 35.19
OQU80682 Sorghum plasma membrane 42.03 34.91
EER92449 Sorghum plasma membrane 38.12 34.54
KXG25805 Sorghum peroxisome, plastid 37.89 31.33
Protein Annotations
Gene3D:1.20.1560.10MapMan:24.1.3.1.1Gene3D:3.40.50.300EntrezGene:8060300InterPro:AAA+_ATPaseInterPro:ABC1_TM_dom
InterPro:ABC1_TM_sfInterPro:ABC_transporter-likeInterPro:ABC_transporter_CSUniProt:C5XI10ProteinID:EES02821.1GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887
GO:GO:0042626GO:GO:0055085InterPro:IPR003439InterPro:IPR011527InterPro:IPR036640EnsemblPlants:KXG32330
ProteinID:KXG32330ProteinID:KXG32330.1InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664ScanProsite:PS00211
PFscan:PS50893PFscan:PS50929PANTHER:PTHR24221PANTHER:PTHR24221:SF292SMART:SM00382EnsemblPlantsGene:SORBI_3003G139300
SUPFAM:SSF52540SUPFAM:SSF90123TMHMM:TMhelixUniParc:UPI0001A84FF1RefSeq:XP_002457701.1SEG:seg
Description
hypothetical protein
Coordinates
chr3:-:13495227..13502017
Molecular Weight (calculated)
137873.0 Da
IEP (calculated)
8.743
GRAVY (calculated)
0.148
Length
1280 amino acids
Sequence
(BLAST)
0001: MPESWRPAEA NASSQPAAAG TSGPSAPSPG NGAKGGSPGA AEAAATATAT RVPFHKLFAF ADSTDVALML LGALGAVANG AAMPFMTVLF GNLIDAFGGA
0101: LSIHDVVNRV SMVSLEFIYL AIASAVASFV QVTCWMITGE RQAARIRNLY LKTILRQEIA FFDKYTSTGE VVGRMSGDTV LIQDAMGEKV GKFIQLVVTF
0201: LGGFIVAFAQ GWLLTLVMMA TIPPLVMAGA VMSNVVTKMA SLGQAAYAES SVVVEQTIGS IRTVASFTGE KRAVEKYNKS LKNAYKSGVR EGLATGLGMG
0301: TVMVLLFCGY SLGIWYGAKL ILEKGYTGAK VMNVIFAVLT GSLALGQASP SMKAFAGGQA AAYKMFETIN RTPEIDAYST TGRKLEDIRG DIEFRDVYFS
0401: YPTRPDEQIF KGFSLTIPSG MTIALVGQSG SGKSTVISLI ERFYDPQLGD VLIDGVNLKE FQLRWIRSKI GLVSQEPVLF AASIKENIAY GKDNATDLEI
0501: RAAAELANAA KFIDKMPQGF DTSVGEHGTQ LSGGQKQRIA IARAILKDPR ILLLDEATSA LDAESERIVQ EALDRVMTNR TTVIVAHRLS TVRNADTIAV
0601: IHQGTLVEKG PHNELLRDPE GAYSQLIRLQ EANQQNNRKG DANARPGKQT SINKSASRRS SRDNSSHHSF SVPFGMPLGI DIQDGSSNKL CDEIPQEVPL
0701: SRLASLNKPE IPVLILGSIA SVISGVIFPI FAILLSNVIK AFYEPPHLLR RDSQFWASMF LVFGAVYFLS LPVSSYLFSI AGCRLIRRIR LMTFEKVVNM
0801: EIEWFDHPEN SSGAIGARLS ADAAKVRGLV GDALQLVVQN SSTLVAGLVI AFVSNWELSL IILALIPLIG LNGWIQMKFI QGFSADAKMM YEEASQVAND
0901: AVSSIRTVAS FSAEEKVMDL YKKKCEGPLR TGIRTGIISG IGFGVSFFLL FGVYAASFYA GARLVEDRKT TFPKVFRVFL ALAMAAIGVS QSSTLTSDSS
1001: KAKSAASSIF AIVDRKSRID PSEDAGVTVE TLRGNIEFQH VSFRYPTRPD VQIFRDLCLT IHAGKTVALV GESGSGKSTA ISLLQRFYDP DVGNILLDGV
1101: DIQKFQLRWL RQQMGLVSQE PALFNDTIRA NIAYGKDGQA TESEIISAAE LANAHKFISS ALQGYDTMVG ERGAQLSGGQ KQRVAIARAI VKDPRILLLD
1201: EATSALDAES ERIVQDALDR VMVNRTTVIV AHRLSTIQNA DLIAVVRNGV IIEKGKHDAL INIKDGAYAS LVALHSAASS
Best Arabidopsis Sequence Match ( AT3G62150.3 )
(BLAST)
0001: MDSVIESEEG LKVDSPNRAD AETSNSKIHE EDEKELKTES DLKEEKKKTE KNKQEEDEKT KTVPFHKLFA FADSFDIILM ILGTIGAVGN GLGFPIMTIL
0101: FGDVIDVFGQ NQNSSDVSDK IAKVALKFVY LGLGTLVAAL LQVSGWMISG ERQAGRIRSL YLQTILRQDI AFFDVETNTG EVVGRMSGDT VLIQDAMGEK
0201: VGKAIQLVST FIGGFVIAFT EGWLLTLVMV SSIPLLVMSG AALAIVISKM ASRGQTSYAK AAVVVEQTVG SIRTVASFTG EKQAISNYNK HLVSAYRAGV
0301: FEGASTGLGL GTLNIVIFCT YALAVWYGGK MILEKGYTGG QVLIIIFAVL TGSMSLGQAS PCLSAFAAGQ AAAYKMFEAI KRKPEIDASD TTGKVLDDIR
0401: GDIELNNVNF SYPARPEEQI FRGFSLSISS GSTVALVGQS GSGKSTVVSL IERFYDPQSG EVRIDGINLK EFQLKWIRSK IGLVSQEPVL FTSSIKENIA
0501: YGKENATVEE IRKATELANA SKFIDKLPQG LDTMVGEHGT QLSGGQKQRI AVARAILKDP RILLLDEATS ALDAESERIV QEALDRIMVN RTTVVVAHRL
0601: STVRNADMIA VIHQGKIVEK GSHSELLRDP EGAYSQLIRL QEDTKQTEDS TDEQKLSMES MKRSSLRKSS LSRSLSKRSS SFSMFGFPAG IDTNNEAIPE
0701: KDIKVSTPIK EKKVSFFRVA ALNKPEIPML ILGSIAAVLN GVILPIFGIL ISSVIKAFFK PPEQLKSDTR FWAIIFMLLG VASMVVFPAQ TIFFSIAGCK
0801: LVQRIRSMCF EKVVRMEVGW FDETENSSGA IGARLSADAA TVRGLVGDAL AQTVQNLASV TAGLVIAFVA SWQLAFIVLA MLPLIGLNGY IYMKFMVGFS
0901: ADAKRMYEEA SQVANDAVGS IRTVASFCAE EKVMKMYKKK CEGPMRTGIR QGIVSGIGFG VSFFVLFSSY AASFYAGARL VDDGKTTFDS VFRVFFALTM
1001: AAVAISQSSS LSPDSSKASN AAASIFAVID RESKIDPSDE SGRVLDNVKG DIELRHISFK YPSRPDVQIF QDLCLSIRAG KTIALVGESG SGKSTVIALL
1101: QRFYDPDSGQ ITLDGVEIKT LQLKWLRQQT GLVSQEPVLF NETIRANIAY GKGGDATETE IVSAAELSNA HGFISGLQQG YDTMVGERGV QLSGGQKQRV
1201: AIARAIVKDP KVLLLDEATS ALDAESERVV QDALDRVMVN RTTVVVAHRL STIKNADVIA VVKNGVIVEK GKHETLINIK DGVYASLVQL HLSAST
Arabidopsis Description
ABCB21ABC transporter B family member 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1Q9]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.