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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • peroxisome 1
  • plasma membrane 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400048379 Potato golgi, peroxisome, plasma membrane 91.28 98.5
VIT_11s0016g03160.t01 Wine grape endoplasmic reticulum, golgi, plasma membrane 78.0 78.12
HORVU3Hr1G068650.8 Barley peroxisome, plasma membrane 66.01 65.8
CDY64952 Canola peroxisome, plasma membrane, vacuole 52.16 64.97
Bra025425.1-P Field mustard peroxisome, plasma membrane, vacuole 65.28 64.54
Solyc05g013890.1.1 Tomato cytosol, plasma membrane 39.04 50.21
Solyc07g064120.1.1 Tomato plasma membrane 47.27 46.07
Solyc07g018130.1.1 Tomato plasma membrane 47.11 45.33
Solyc02g087870.2.1 Tomato plasma membrane 43.19 42.43
Solyc03g005860.2.1 Tomato plasma membrane 41.56 40.51
Solyc08g076720.2.1 Tomato unclear 41.32 40.33
Solyc11g067300.1.1 Tomato plasma membrane 41.08 40.0
Solyc02g071350.2.1 Tomato plastid 40.83 39.67
Solyc06g009280.1.1 Tomato cytosol, peroxisome, plasma membrane 41.65 39.64
Solyc09g008240.2.1 Tomato peroxisome 42.3 39.5
Solyc02g071340.1.1 Tomato plasma membrane 39.85 38.72
Solyc12g098840.1.1 Tomato peroxisome 39.77 38.12
Solyc06g072960.1.1 Tomato peroxisome 30.97 36.97
Solyc06g009290.2.1 Tomato nucleus 41.73 36.57
Solyc04g010310.2.1 Tomato plasma membrane 34.64 33.07
Protein Annotations
MapMan:24.1.3.1.1Gene3D:3.40.50.300InterPro:AAA+_ATPaseInterPro:ABC1_TM_domInterPro:ABC1_TM_sfInterPro:ABC_transporter-like
InterPro:ABC_transporter_CSGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085InterPro:IPR003439InterPro:IPR011527
InterPro:IPR036640UniProt:K4BIP1InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664ScanProsite:PS00211
PFscan:PS50893PFscan:PS50929PANTHER:PTHR24221PANTHER:PTHR24221:SF228SMART:SM00382SUPFAM:SSF52540
SUPFAM:SSF90123EnsemblPlantsGene:Solyc03g093650.2EnsemblPlants:Solyc03g093650.2.1TMHMM:TMhelixUniParc:UPI00027692CDSEG:seg
Description
No Description!
Coordinates
chr3:-:55272930..55279358
Molecular Weight (calculated)
134317.0 Da
IEP (calculated)
8.234
GRAVY (calculated)
0.150
Length
1227 amino acids
Sequence
(BLAST)
0001: MSSSTEKAFE NKNKNSIGII FRYADGKDIL LMFLGTIGAI GDGISTNCLL VYVSQLFNSL GYGKTQQNDH NFMEQIEKCS LYFVLLGLGV MVVAFMEGYC
0101: WSKTSERQVL KIRYKYLEAI LRQEVGFFDS QEATTSEITN GISKDTSLIQ EVLSEKVPLF VMHTTVFISG VVFSAYFSWR LAIVALPTIF LLIIPGLIYG
0201: KYLLYLSGKS FKEYSKANGI VEQALSSIKT IYSFTAEKSV IERYSLILDG TIKLGMKQGI AKGLAVGSTG LSFAIWALLA WYGSHLIMHN GESGGRIYAA
0301: GVSFVLGGLS LGMALPEVKY FTEASVAASR IFDRIDRVPE IDGEDTRGLV LEDIRGEVEF RNVKFTYPSR PDTVVLKDFN LKIEAGKTVA LVGSSGSGKS
0401: TAIALIQRFY DASAGAICID SVEIKSLQLK WLRGKMGLVS QENALFGTSI KENIMFGKVD ATMDEVVAAA MTANAHNFIT QLPEGYETKI GERGALLSGG
0501: QKQRIAIARA IIKNPVILLL DEATSALDSE SETLVQNALD QAIVGRTTLV VAHKLSTVRN ADLIAVVSNG CISELGAHYE LMEKDGQYAR LAKFQRQFSS
0601: IDQEQSAEPR ISSVARSSAG MRASPAVSAS PLRIEDSPIQ ASPHPPPSFT RLLSLNLPEW KQGIIGILSA IAFGSVQPVY ALTIGGMISA FYSPSHEEMQ
0701: SRIQKYCMIF IILCLVSVVL NLCQHYNFAY MGERLTRRIR LQMLEKILSF EAAWFDEEQN SSGALCCRLS NEAAMVKSLV ADRVSLLVQS TSAVTVAMVM
0801: GLIVAWKLAL VMIVVQPLTI LCFYTRKVLL STMTAKFVKA QCRSTQIAVE AVYNHRIVTS FGSIDKVLDI FDEAQDEPRK EARKKSWLAG IGIGSAQGLT
0901: FICWALDFWY GGKLVNAGEI SAADVFKTFF ILVSTGKVIA EAGSMTSDLA KGSTVVASIF SILDRKSLIE GSNEAKNNSM GTKMTGRIEM KKVDFAYPSR
1001: PDRLVLHEFS LEVKAGTSIG LVGKSGCGKS TVIALIQRFY DADKGSLKID GMDIRLLDLG WYRRNMALVS QEPVIYSGSI RENILFGKLN ASENEVVEAA
1101: KAANAHEFIS SLKNGYETEC GDRGVTISGG QKQRIAIARA IIRNPSILLL DEATSALDVQ SEQLVQEALD QLMVGRTTVV VAHRLNTIRN LDSIAFISEG
1201: KVLEKGTYSY LKDKRGAFFN LVNLQST
Best Arabidopsis Sequence Match ( AT3G28345.1 )
(BLAST)
0001: MGKEEEKESG RNKMNCFGSV RSIFMHADGV DWLLMGLGLI GAVGDGFTTP LVLLITSKLM NNIGGSSFNT DTFMQSISKN SVALLYVACG SWVVCFLEGY
0101: CWTRTGERQT ARMREKYLRA VLRQDVGYFD LHVTSTSDVI TSVSSDSFVI QDVLSEKLPN FLMSASTFVG SYIVGFILLW RLAIVGLPFI VLLVIPGLMY
0201: GRALISISRK IREEYNEAGF VAEQAISSVR TVYAFSGERK TISKFSTALQ GSVKLGIKQG LAKGITIGSN GITFAMWGFM SWYGSRMVMY HGAQGGTVFA
0301: VAAAIAIGGV SLGGGLSNLK YFFEAASVGE RIMEVINRVP KIDSDNPDGH KLEKIRGEVE FKNVKFVYPS RLETSIFDDF CLRVPSGKTV ALVGGSGSGK
0401: STVISLLQRF YDPLAGEILI DGVSIDKLQV KWLRSQMGLV SQEPALFATT IKENILFGKE DASMDDVVEA AKASNAHNFI SQLPNGYETQ VGERGVQMSG
0501: GQKQRIAIAR AIIKSPTILL LDEATSALDS ESERVVQEAL ENASIGRTTI LIAHRLSTIR NADVISVVKN GHIVETGSHD ELMENIDGQY STLVHLQQIE
0601: KQDINVSVKI GPISDPSKDI RNSSRVSTLS RSSSANSVTG PSTIKNLSED NKPQLPSFKR LLAMNLPEWK QALYGCISAT LFGAIQPAYA YSLGSMVSVY
0701: FLTSHDEIKE KTRIYALSFV GLAVLSFLIN ISQHYNFAYM GEYLTKRIRE RMLSKVLTFE VGWFDRDENS SGAICSRLAK DANVVRSLVG DRMALVVQTV
0801: SAVTIAFTMG LVIAWRLALV MIAVQPVIIV CFYTRRVLLK SMSKKAIKAQ DESSKLAAEA VSNVRTITAF SSQERIMKML EKAQESPRRE SIRQSWFAGF
0901: GLAMSQSLTS CTWALDFWYG GRLIQDGYIT AKALFETFMI LVSTGRVIAD AGSMTTDLAK GSDAVGSVFA VLDRYTSIDP EDPDGYETER ITGQVEFLDV
1001: DFSYPTRPDV IIFKNFSIKI EEGKSTAIVG PSGSGKSTII GLIERFYDPL KGIVKIDGRD IRSYHLRSLR RHIALVSQEP TLFAGTIREN IIYGGVSDKI
1101: DEAEIIEAAK AANAHDFITS LTEGYDTYCG DRGVQLSGGQ KQRIAIARAV LKNPSVLLLD EATSALDSQS ERVVQDALER VMVGRTSVVI AHRLSTIQNC
1201: DAIAVLDKGK LVERGTHSSL LSKGPTGIYF SLVSLQTTSG
Arabidopsis Description
ABCB15ABC transporter B family member 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHD1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.