Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 2
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400069516 | Potato | peroxisome | 96.79 | 83.9 |
| TraesCS7A01G303200.1 | Wheat | cytosol | 48.35 | 63.55 |
| VIT_16s0098g00570.t01 | Wine grape | cytosol, plasma membrane, vacuole | 67.32 | 58.25 |
| KRH53669 | Soybean | plasma membrane | 69.65 | 57.1 |
| HORVU0Hr1G015570.6 | Barley | endoplasmic reticulum, plasma membrane | 56.03 | 52.8 |
| TraesCS7D01G298600.1 | Wheat | peroxisome | 63.81 | 52.15 |
| TraesCS7B01G203400.1 | Wheat | peroxisome | 63.62 | 51.99 |
| OQU79902 | Sorghum | nucleus, peroxisome, plasma membrane | 63.72 | 51.98 |
| HORVU7Hr1G071870.33 | Barley | peroxisome | 63.52 | 51.5 |
| Zm00001d024600_P002 | Maize | peroxisome | 63.23 | 51.46 |
| TraesCS7D01G298400.1 | Wheat | peroxisome | 57.88 | 47.07 |
| TraesCS7B01G203300.1 | Wheat | peroxisome | 57.78 | 46.99 |
| TraesCS7A01G303100.1 | Wheat | peroxisome | 57.59 | 46.84 |
| TraesCS6B01G170700.1 | Wheat | plasma membrane | 57.1 | 46.81 |
| TraesCS6D01G131900.1 | Wheat | plasma membrane | 57.0 | 46.69 |
| OQU79903 | Sorghum | peroxisome | 57.39 | 46.57 |
| Zm00001d049565_P001 | Maize | peroxisome | 57.2 | 46.52 |
| Solyc05g013890.1.1 | Tomato | cytosol, plasma membrane | 36.48 | 39.31 |
| Solyc02g087870.2.1 | Tomato | plasma membrane | 42.02 | 34.59 |
| Solyc08g076720.2.1 | Tomato | unclear | 40.56 | 33.17 |
| Solyc09g008240.2.1 | Tomato | peroxisome | 41.54 | 32.5 |
| Solyc02g071340.1.1 | Tomato | plasma membrane | 39.01 | 31.75 |
| Solyc02g071350.2.1 | Tomato | plastid | 38.81 | 31.59 |
| Solyc07g018130.1.1 | Tomato | plasma membrane | 38.72 | 31.22 |
| Solyc03g005860.2.1 | Tomato | plasma membrane | 38.13 | 31.14 |
| Solyc06g009280.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 39.01 | 31.11 |
| Solyc03g093650.2.1 | Tomato | plasma membrane | 36.97 | 30.97 |
| Solyc12g098840.1.1 | Tomato | peroxisome | 38.42 | 30.86 |
| Solyc07g064120.1.1 | Tomato | plasma membrane | 37.74 | 30.82 |
| Solyc11g067300.1.1 | Tomato | plasma membrane | 37.65 | 30.71 |
| Solyc04g010310.2.1 | Tomato | plasma membrane | 38.13 | 30.51 |
| Solyc06g009290.2.1 | Tomato | nucleus | 39.11 | 28.71 |
Protein Annotations
| MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like |
| InterPro:ABC_transporter_CS | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 |
| InterPro:IPR011527 | InterPro:IPR036640 | UniProt:K4C916 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 |
| ScanProsite:PS00211 | PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF305 | SMART:SM00382 |
| SUPFAM:SSF52540 | SUPFAM:SSF90123 | EnsemblPlantsGene:Solyc06g072960.1 | EnsemblPlants:Solyc06g072960.1.1 | TMHMM:TMhelix | UniParc:UPI0002765BBA |
Description
No Description!
Coordinates
chr6:+:44966412..44971635
Molecular Weight (calculated)
113073.0 Da
IEP (calculated)
7.402
GRAVY (calculated)
0.062
Length
1028 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAYLSEATSM VEETISQIRT VFAFVGENLS IKSFSDCIER QMRISKKEAL IKGLGTGTFQ TITFASWSLI VWVGAVVVTA KRSTGGDVIA AVMSILFGAI
0101: SLTYAAPDIQ IFNQAKAAGK EVFQIIDRKP TIDADSGGIT FEVIDGNINI RDVHFAYPSR QEKLVLQGFS LSIPAGTVVA LVGSSGCGKS TIMSLLMRFY
0201: DPVRGEILLD NHNIKDLDLK FLRRNIGVVS QEPSLFAGSI KDNIKMGNIN ANDQQIERAA LLANAHSFIS QLPNQYLTEV GQRGLQLSGG QKQRIAIARA
0301: ILKNPPILLL DEATSALDTE SEKQVQEALE TAAQGRTVIL IAHRMSTIVN ADMIAIVEDG KVVVTGTHNN LLDTSIFYNR LFCMQSITQD CQTRLEATNT
0401: KVISIQEDSS QDHKQPDEPN ESKTELKELP EREQIQIKER HIFFRIWFAL NEKEIIKTTI GSLAAAFAGI SKPVFGFFII TIGVAYYHPD SKEKVALYSA
0501: IFASIGVVSL FAHTLQHYLF GVIGEKAMTN LRQALYTATL RNELAWFEKP ENSIGSLTSK IASDTSTVKI IISDRMSVIV QCVSSILIAT TVSMKVNWRM
0601: GLVAWAVMPC HFIGGLIQAK SAKGFSGDSS LAHSKLVALT SESATNIKTV ASFCHEEQIL EKAKLSLKRP LRKGKSESIK FGIIQGISLC LWNIAHAVAL
0701: WYTTILVDRN QASFENGIRA YQIFSLTVPS ITELWTLIPT VISAIDVLKP VFQILDRSTE IVPDMPDIAK PETIKGEIEF LNVQFCYPSR PEVTVLNNFS
0801: LQIEAGLKVA LVGESGAGKS SIVALLLRFY DTNEGNVLID GKDIRDYNLR KLRAQIGLVQ QEPLLFSCSI RENICYGSER ASEAEIVEVS RSANIHEFIS
0901: NLPDGYDTLV GEKGSQLSGG QKQRVAIARA LLKKPRIMLL DEATSALDTE SERTVVSALE SMKLNSSGIT KVTQITVAHR LSTVINSDTI VVMDKGKIVE
1001: KGSHSNLMAE PEGVYSRFVR LQSMEKKY
0101: SLTYAAPDIQ IFNQAKAAGK EVFQIIDRKP TIDADSGGIT FEVIDGNINI RDVHFAYPSR QEKLVLQGFS LSIPAGTVVA LVGSSGCGKS TIMSLLMRFY
0201: DPVRGEILLD NHNIKDLDLK FLRRNIGVVS QEPSLFAGSI KDNIKMGNIN ANDQQIERAA LLANAHSFIS QLPNQYLTEV GQRGLQLSGG QKQRIAIARA
0301: ILKNPPILLL DEATSALDTE SEKQVQEALE TAAQGRTVIL IAHRMSTIVN ADMIAIVEDG KVVVTGTHNN LLDTSIFYNR LFCMQSITQD CQTRLEATNT
0401: KVISIQEDSS QDHKQPDEPN ESKTELKELP EREQIQIKER HIFFRIWFAL NEKEIIKTTI GSLAAAFAGI SKPVFGFFII TIGVAYYHPD SKEKVALYSA
0501: IFASIGVVSL FAHTLQHYLF GVIGEKAMTN LRQALYTATL RNELAWFEKP ENSIGSLTSK IASDTSTVKI IISDRMSVIV QCVSSILIAT TVSMKVNWRM
0601: GLVAWAVMPC HFIGGLIQAK SAKGFSGDSS LAHSKLVALT SESATNIKTV ASFCHEEQIL EKAKLSLKRP LRKGKSESIK FGIIQGISLC LWNIAHAVAL
0701: WYTTILVDRN QASFENGIRA YQIFSLTVPS ITELWTLIPT VISAIDVLKP VFQILDRSTE IVPDMPDIAK PETIKGEIEF LNVQFCYPSR PEVTVLNNFS
0801: LQIEAGLKVA LVGESGAGKS SIVALLLRFY DTNEGNVLID GKDIRDYNLR KLRAQIGLVQ QEPLLFSCSI RENICYGSER ASEAEIVEVS RSANIHEFIS
0901: NLPDGYDTLV GEKGSQLSGG QKQRVAIARA LLKKPRIMLL DEATSALDTE SERTVVSALE SMKLNSSGIT KVTQITVAHR LSTVINSDTI VVMDKGKIVE
1001: KGSHSNLMAE PEGVYSRFVR LQSMEKKY
0001: MDNTERSSNG NIQAETEAKE EKKNIKKESV SLMGLFSAAD KLDYFLMLLG GLGACIHGAT LPLFFVFFGK MLDSLGNLST DPKAISSRVS QNALYLVYLG
0101: LVNFVSAWIG VSCWMQTGER QTARLRINYL KSILAKDITF FDTEARDSNL IFHISSDAIL VQDAIGDKTD HVLRYLSQFI AGFVIGFLSV WQLTLLTLGV
0201: VPLIAIAGGG YAIVMSTISE KSETAYADAG KVAEEVMSQV RTVYAFVGEE KAVKSYSNSL KKALKLGKRS GLAKGLGVGL TYSLLFCAWA LLLWYASLLV
0301: RHGKTNGAKA FTTILNVIFS GFALGQAAPS LSAIAKGRVA AANIFRMIGN NNSESSQRLD EGTTLQNVAG RIEFQKVSFA YPSRPNMVFE NLSFTIRSGK
0401: TFAFVGPSGS GKSTIISMVQ RFYEPNSGEI LLDGNDIKSL KLKWFREQLG LVSQEPALFA TTIASNILLG KENANMDQII EAAKAANADS FIKSLPNGYN
0501: TQVGEGGTQL SGGQKQRIAI ARAVLRNPKI LLLDEATSAL DAESEKIVQQ ALDNVMEKRT TIVVAHRLST IRNVDKIVVL RDGQVRETGS HSELMLRGGD
0601: YATLVNCQET EPQENSRSIM SETCKSQAGS SSSRRVSSSR RTSSFRVDQE KTKNDDSKKD FSSSSMIWEL IKLNSPEWPY ALLGSIGAVL AGAQTPLFSM
0701: GIAYVLTAFY SPFPNVIKRD VEKVAIIFAG AGIVTAPIYL LQHYFYTLMG ERLTSRVRLS LFSAILSNEI GWFDLDENNT GSLTSILAAD ATLVRSALAD
0801: RLSTIVQNLS LTVTALALAF FYSWRVAAVV TACFPLLIAA SLTEQLFLKG FGGDYTRAYS RATSVAREAI ANIRTVAAYG AEKQISEQFT CELSKPTKNA
0901: FVRGHISGFG YGLSQFLAFC SYALGLWYVS VLINHKETNF GDSIKSFMVL IVTAFSVSET LALTPDIVKG TQALGSVFRV LHRETKISPD QPNSRMVSQV
1001: KGDIEFRNVS FVYPTRPEID IFKNLNLRVS AGKSLAVVGP SGSGKSTVIG LIMRFYDPSN GNLCIDGQDI KTLNLRSLRK KLALVQQEPA LFSTTIYENI
1101: KYGNENASEA EIMEAAKAAN AHEFIIKMEE GYKTHAGDKG VQLSGGQKQR VAIARAVLKD PSVLLLDEAT SALDTSSEKL VQEALDKLMK GRTTVLVAHR
1201: LSTIRKADTV AVLHKGRVVE KGSHRELVSI PNGFYKQLTS LQEVL
0101: LVNFVSAWIG VSCWMQTGER QTARLRINYL KSILAKDITF FDTEARDSNL IFHISSDAIL VQDAIGDKTD HVLRYLSQFI AGFVIGFLSV WQLTLLTLGV
0201: VPLIAIAGGG YAIVMSTISE KSETAYADAG KVAEEVMSQV RTVYAFVGEE KAVKSYSNSL KKALKLGKRS GLAKGLGVGL TYSLLFCAWA LLLWYASLLV
0301: RHGKTNGAKA FTTILNVIFS GFALGQAAPS LSAIAKGRVA AANIFRMIGN NNSESSQRLD EGTTLQNVAG RIEFQKVSFA YPSRPNMVFE NLSFTIRSGK
0401: TFAFVGPSGS GKSTIISMVQ RFYEPNSGEI LLDGNDIKSL KLKWFREQLG LVSQEPALFA TTIASNILLG KENANMDQII EAAKAANADS FIKSLPNGYN
0501: TQVGEGGTQL SGGQKQRIAI ARAVLRNPKI LLLDEATSAL DAESEKIVQQ ALDNVMEKRT TIVVAHRLST IRNVDKIVVL RDGQVRETGS HSELMLRGGD
0601: YATLVNCQET EPQENSRSIM SETCKSQAGS SSSRRVSSSR RTSSFRVDQE KTKNDDSKKD FSSSSMIWEL IKLNSPEWPY ALLGSIGAVL AGAQTPLFSM
0701: GIAYVLTAFY SPFPNVIKRD VEKVAIIFAG AGIVTAPIYL LQHYFYTLMG ERLTSRVRLS LFSAILSNEI GWFDLDENNT GSLTSILAAD ATLVRSALAD
0801: RLSTIVQNLS LTVTALALAF FYSWRVAAVV TACFPLLIAA SLTEQLFLKG FGGDYTRAYS RATSVAREAI ANIRTVAAYG AEKQISEQFT CELSKPTKNA
0901: FVRGHISGFG YGLSQFLAFC SYALGLWYVS VLINHKETNF GDSIKSFMVL IVTAFSVSET LALTPDIVKG TQALGSVFRV LHRETKISPD QPNSRMVSQV
1001: KGDIEFRNVS FVYPTRPEID IFKNLNLRVS AGKSLAVVGP SGSGKSTVIG LIMRFYDPSN GNLCIDGQDI KTLNLRSLRK KLALVQQEPA LFSTTIYENI
1101: KYGNENASEA EIMEAAKAAN AHEFIIKMEE GYKTHAGDKG VQLSGGQKQR VAIARAVLKD PSVLLLDEAT SALDTSSEKL VQEALDKLMK GRTTVLVAHR
1201: LSTIRKADTV AVLHKGRVVE KGSHRELVSI PNGFYKQLTS LQEVL
Arabidopsis Description
ABCB13PGP13 [Source:UniProtKB/TrEMBL;Acc:A0A178W4F4]
SUBAcon: [peroxisome,vacuole,plasma membrane]
SUBAcon: [peroxisome,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.