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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 1
PPI

Inferred distinct locusB in Crop

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr4P04430_001 Banana cytosol, peroxisome, plasma membrane 85.82 85.31
TraesCS7A01G284900.1 Wheat plasma membrane 73.72 79.69
AT2G36910.1 Thale cress peroxisome 73.27 76.75
KRG96023 Soybean cytosol, peroxisome, plasma membrane 75.95 76.4
VIT_08s0007g05060.t01 Wine grape cytosol, peroxisome, plasma membrane 76.61 76.22
Solyc09g008240.2.1 Tomato peroxisome 74.31 76.18
PGSC0003DMT400009924 Potato peroxisome 75.35 76.14
KRH67730 Soybean cytosol, peroxisome, plasma membrane 75.8 76.08
TraesCS7B01G181700.1 Wheat cytosol 77.06 75.88
KRH32507 Soybean cytosol, nucleus, plasma membrane 75.5 75.73
TraesCS7D01G284100.1 Wheat cytosol 77.21 75.64
KRH19897 Soybean cytosol, peroxisome, plasma membrane 75.06 75.39
CDY46744 Canola cytosol, peroxisome, plasma membrane 74.68 75.19
Os08t0564300-04 Rice plasma membrane 74.98 75.15
Bra023087.1-P Field mustard cytosol, nucleus, plasma membrane 74.68 75.13
CDX79704 Canola plasma membrane 74.61 74.94
Bra017216.1-P Field mustard cytosol, nucleus, plasma membrane 73.94 74.44
HORVU7Hr1G063020.3 Barley cytosol 77.06 73.56
Zm00001d031871_P001 Maize cytosol 77.21 73.45
OQU80682 Sorghum plasma membrane 74.02 64.7
GSMUA_Achr8P24160_001 Banana plasma membrane 45.29 54.13
GSMUA_Achr4P09980_001 Banana plasma membrane 40.46 47.64
GSMUA_Achr8P29860_001 Banana endoplasmic reticulum 36.01 43.85
GSMUA_Achr1P25070_001 Banana plasma membrane 28.8 42.83
GSMUA_Achr2P20180_001 Banana plasma membrane 28.95 40.0
GSMUA_Achr9P16700_001 Banana plasma membrane 37.64 39.92
GSMUA_Achr3P17720_001 Banana peroxisome 35.93 38.66
GSMUA_Achr4P17010_001 Banana peroxisome 20.79 25.34
GSMUA_Achr1P18340_001 Banana plasma membrane 36.08 23.23
Protein Annotations
Gene3D:1.20.1560.10MapMan:24.1.3.1.1Gene3D:3.40.50.300InterPro:AAA+_ATPaseInterPro:ABC1_TM_domInterPro:ABC1_TM_sf
InterPro:ABC_transporter-likeInterPro:ABC_transporter_CSGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215
GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085EnsemblPlantsGene:GSMUA_Achr4G12130_001
EnsemblPlants:GSMUA_Achr4P12130_001EnsemblPlants:GSMUA_Achr4T12130_001InterPro:IPR003439InterPro:IPR011527InterPro:IPR036640UniProt:M0SN78
InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664ScanProsite:PS00211PFscan:PS50893PFscan:PS50929
PANTHER:PTHR24221PANTHER:PTHR24221:SF119SMART:SM00382SUPFAM:SSF52540SUPFAM:SSF90123TMHMM:TMhelix
UniParc:UPI0002961966SEG:seg::::
Description
ABC transporter B family member 1 [Source:GMGC_GENE;Acc:GSMUA_Achr4G12130_001]
Coordinates
chr4:-:8881719..8887246
Molecular Weight (calculated)
145904.0 Da
IEP (calculated)
8.322
GRAVY (calculated)
0.079
Length
1347 amino acids
Sequence
(BLAST)
0001: MSQQQAFEHG EEEVIKGRVV VEEWSRPELQ AFHLHSPPHP SSADQDVPQE ELLVIEVAER GSGGVAGPVA AASGGAMSPA TTVSSSAAPG LEMEATNGNI
0101: KVEEPPVPPP SAAVATAPAA AGSGSQEDKK PAPPAPTVGF GKLFRFADGL DCVLMAVGTA GAIVHGCSLP IFLRFFADLV NSFGSNTGDP DTMVREVVKY
0201: AFYFLVVGAA IWASSWAEIS CWMWTGERQS TKMRIKYLEA ALNQDVRYFD TEVRTSDVVF AINADAVMVQ DAISEKLGNF IHYMATFVSG FVVGFTAAWQ
0301: LALVTLAVVP LIAVIGGIHT ATLAKLSSKS QDALSQASNI AEQALAQIRT VQSFVGESRV LQAYSASLGV AQKLGYRSGF AKGLGLGATY FTVFCCYALL
0401: LWYGGLLVRH HHTNGGLAIS TMFAVMIGGL ALGQSAPSMA AFAKARVAAA KIYRTIEHRP SIDRKNDTGI TIALVGSSGS GKSTVVSLIE RFYDPTAGQI
0501: LLDGHDIKSL KLRWLRQQIG LVSQEPALFA TTIKENLLLG REDATQVEME EAARVANAHS FIVKLPDGYD SQVGERGLQL SGGQKQRIAI ARAMLKNPAI
0601: LLLDEATSAL DSESEKLVQE ALDRFMIGRT TLVIAHRLST VRKADVVAVL QQGSVTEIGT HDELMGKGDN GLFAKLIRMQ EQAHEAALIN ARKSSARPSS
0701: ARNSVSSPII TRNSSYGRSP YSRRLSDFST SEFSFSVDPN HRMEKLAFRD QASSFLRLAK MNSPEWSYAL IGSIGSMVCG SMSAFFAYVL SAVLSAYYAQ
0801: DYKYMRREIG KYCYLMIGVS SVALLFNTMQ HLFWDVVGEN LTKRVREKML TSILRNEIAW FDREENASAR IAGRLTSDAH SVRSAIGDRI SVIVQNASLM
0901: LVAFTAGFVL QWRLALVLIA VFPVVVAATV LQKMFMNGFS GDLEVAHAKA TQIAGEAVSN VRTVAAFNSE AKITELFAAN LQSPLRRCFW KGQIAGSGFG
1001: IAQFLLYASY ALGLWYASWL VKHGISDFSK TIRVFMVLMV SANGAAEALT LAPDFIKGGR AMRSAFELID RKTEIEPDDL DAAPLPDRLR GEVEFKHVDF
1101: AYPSCPDMPV FRDLTLRARA GKMLALVGPS GCGKSTVISL IQRFYEPTSG RILIDGKDIR KYNLKALRRV ISVVPQEPFL FAASIFDNIA YGREAATEAE
1201: VVEAATMANA HKFISALPDG YRTWVGERGV QLSGGQRQRI AIARVLVKKA PIMLLDEATS ALDAEAERSV QEALERSGVG RTTIVVAHRL ATVRNAHVIA
1301: VIDDGKVVEQ GSHSHLLNHH PDGCYARMLQ LQRFSNNGVP QGPSSST
Best Arabidopsis Sequence Match ( AT2G36910.1 )
(BLAST)
0001: MDNDGGAPPP PPTLVVEEPK KAEIRGVAFK ELFRFADGLD YVLMGIGSVG AFVHGCSLPL FLRFFADLVN SFGSNSNNVE KMMEEVLKYA LYFLVVGAAI
0101: WASSWAEISC WMWSGERQTT KMRIKYLEAA LNQDIQFFDT EVRTSDVVFA INTDAVMVQD AISEKLGNFI HYMATFVSGF IVGFTAVWQL ALVTLAVVPL
0201: IAVIGGIHTT TLSKLSNKSQ ESLSQAGNIV EQTVVQIRVV MAFVGESRAS QAYSSALKIA QKLGYKTGLA KGMGLGATYF VVFCCYALLL WYGGYLVRHH
0301: LTNGGLAIAT MFAVMIGGLA LGQSAPSMAA FAKAKVAAAK IFRIIDHKPT IERNSESGVE LDSVTGLVEL KNVDFSYPSR PDVKILNNFC LSVPAGKTIA
0401: LVGSSGSGKS TVVSLIERFY DPNSGQVLLD GQDLKTLKLR WLRQQIGLVS QEPALFATSI KENILLGRPD ADQVEIEEAA RVANAHSFII KLPDGFDTQV
0501: GERGLQLSGG QKQRIAIARA MLKNPAILLL DEATSALDSE SEKLVQEALD RFMIGRTTLI IAHRLSTIRK ADLVAVLQQG SVSEIGTHDE LFSKGENGVY
0601: AKLIKMQEAA HETAMSNARK SSARPSSARN SVSSPIMTRN SSYGRSPYSR RLSDFSTSDF SLSIDASSYP NYRNEKLAFK DQANSFWRLA KMNSPEWKYA
0701: LLGSVGSVIC GSLSAFFAYV LSAVLSVYYN PDHEYMIKQI DKYCYLLIGL SSAALVFNTL QHSFWDIVGE NLTKRVREKM LSAVLKNEMA WFDQEENESA
0801: RIAARLALDA NNVRSAIGDR ISVIVQNTAL MLVACTAGFV LQWRLALVLV AVFPVVVAAT VLQKMFMTGF SGDLEAAHAK GTQLAGEAIA NVRTVAAFNS
0901: EAKIVRLYTA NLEPPLKRCF WKGQIAGSGY GVAQFCLYAS YALGLWYASW LVKHGISDFS KTIRVFMVLM VSANGAAETL TLAPDFIKGG QAMRSVFELL
1001: DRKTEIEPDD PDTTPVPDRL RGEVELKHID FSYPSRPDIQ IFRDLSLRAR AGKTLALVGP SGCGKSSVIS LIQRFYEPSS GRVMIDGKDI RKYNLKAIRK
1101: HIAIVPQEPC LFGTTIYENI AYGHECATEA EIIQAATLAS AHKFISALPE GYKTYVGERG VQLSGGQKQR IAIARALVRK AEIMLLDEAT SALDAESERS
1201: VQEALDQACS GRTSIVVAHR LSTIRNAHVI AVIDDGKVAE QGSHSHLLKN HPDGIYARMI QLQRFTHTQV IGMTSGSSSR VKEDDA
Arabidopsis Description
ABCB1ABC transporter B family member 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZR72]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.