Factsheet for Os02t0760300-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
cytosol 1
vacuole 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

extracellular: 18372294
extracellular: 28232208

msms PMID: 18372294 doi

T Aki, M Shigyo, R Nakano, T Yoneyama, S Yanagisawa

Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, 113-8657 Japan.

msms PMID: 28232208 doi

Y Wang, R Gupta, W Song, HH Huh, SE Lee, J Wu, GK Agrawal, R Rakwal, KY Kang, SR Park, ST Kim

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os06t0474200-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G64350.1	Os06t0474200-01	AT3G54170.1	9807817

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018134_P001	Maize	mitochondrion	89.29	89.29
EES07562	Sorghum	cytosol, mitochondrion, plastid	89.29	89.29
VIT_03s0017g01060.t01	Wine grape	cytosol, mitochondrion, plastid	80.36	80.36
CDY46798	Canola	cytosol	51.79	78.38
Solyc01g105710.2.1	Tomato	extracellular	77.68	77.68
PGSC0003DMT400083778	Potato	cytosol	77.68	77.68
KRH21780	Soybean	cytosol, mitochondrion, plastid	76.79	76.79
Bra037775.1-P	Field mustard	cytosol, mitochondrion, plastid	75.89	75.89
AT5G64350.1	Thale cress	cytosol, mitochondrion, plastid	74.11	74.11
CDX84517	Canola	cytosol, mitochondrion, plastid	74.11	74.11
Bra024287.1-P	Field mustard	cytosol, mitochondrion, plastid	72.32	72.32
CDY58272	Canola	cytosol, mitochondrion, plastid	72.32	72.32
CDX81222	Canola	cytosol, mitochondrion, plastid	70.54	70.54
CDY18714	Canola	endoplasmic reticulum, extracellular	75.0	65.12
KRH10589	Soybean	cytosol	78.57	62.86
GSMUA_Achr5P05550_001	Banana	cytosol, mitochondrion, plastid	62.5	57.85
TraesCS6A01G314100.1	Wheat	plastid	85.71	49.74
TraesCS6D01G293400.1	Wheat	cytosol	85.71	49.23
TraesCS6B01G344100.1	Wheat	plastid	85.71	49.23
CDY31323	Canola	extracellular	57.14	48.48
HORVU6Hr1G077340.1	Barley	mitochondrion	80.36	37.34
Os01t0844300-01	Rice	nucleus	38.39	23.24
Os05t0458100-01	Rice	nucleus	38.39	23.12
Os08t0525600-01	Rice	cytosol, extracellular, plasma membrane, plastid	45.54	8.79
Os04t0352400-01	Rice	mitochondrion, plasma membrane	45.54	8.72
Os01t0564300-01	Rice	cytosol, plasma membrane	31.25	8.29
Os11t0148300-01	Rice	cytosol	24.11	7.2
Os12t0145500-01	Rice	cytosol	23.21	7.03
Os02t0491400-01	Rice	plasma membrane	41.96	6.89
Os01t0562400-01	Rice	mitochondrion	27.68	5.38
Os03t0367000-01	Rice	plasma membrane	30.36	5.38
Os01t0563000-04	Rice	plasma membrane	30.36	5.21

Protein Annotations

MapMan:18.12.2	Gene3D:3.10.50.40	EntrezGene:4330800	EMBL:AK063850	EMBL:AK121481	ProteinID:BAD19404.1
ProteinID:BAF10102.1	ProteinID:BAS81027.1	ProteinID:EAZ24696.1	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755
GO:GO:0003824	GO:GO:0005488	GO:GO:0005528	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016853	GO:GO:0019538	GO:GO:0061077	InterPro:IPR001179	EnsemblPlantsGene:Os02g0760300	EnsemblPlants:Os02t0760300-01
PFAM:PF00254	InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom	PFscan:PS50059	PANTHER:PTHR10516	PANTHER:PTHR10516:SF214
UniProt:Q6K8D4	SUPFAM:SSF54534	UniParc:UPI000037585C	RefSeq:XP_015625368.1	:	:

Description

FK506 binding protein 12Similar to Immunophilin. (Os02t0760300-01)

Coordinates

chr2:-:32017761..32019838

Molecular Weight (calculated)

12086.5 Da

IEP (calculated)

8.211

GRAVY (calculated)

-0.204

Length

112 amino acids

Sequence
(BLAST)

001: MGFEKTILKA GTGPKPVKGQ KVTVHCTGFG KDNDLAKKFW STKDAGQEPF SFNIGQGSVI KGWDEGVMTM QVGEVARIQC TPDYAYGASG FPAWGIRPNS
101: VLVFEIEVLS AQ

Best Arabidopsis Sequence Match ( AT5G64350.1 )
(BLAST)

001: MGVEKQVIRP GNGPKPAPGQ TVTVHCTGFG KDGDLSQKFW STKDEGQKPF SFQIGKGAVI KGWDEGVIGM QIGEVARLRC SSDYAYGAGG FPAWGIQPNS
101: VLDFEIEVLS VQ

Arabidopsis Description

FKBP12Peptidyl-prolyl cis-trans isomerase FKBP12 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGG0]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.