Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037775.1-P | Field mustard | cytosol, mitochondrion, plastid | 86.05 | 99.11 |
| CDX84517 | Canola | cytosol, mitochondrion, plastid | 81.4 | 93.75 |
| CDY46798 | Canola | cytosol | 52.71 | 91.89 |
| CDX81222 | Canola | cytosol, mitochondrion, plastid | 79.07 | 91.07 |
| AT5G64350.1 | Thale cress | cytosol, mitochondrion, plastid | 78.29 | 90.18 |
| CDY58272 | Canola | cytosol, mitochondrion, plastid | 78.29 | 90.18 |
| KRH21780 | Soybean | cytosol, mitochondrion, plastid | 72.87 | 83.93 |
| Solyc01g105710.2.1 | Tomato | extracellular | 69.77 | 80.36 |
| PGSC0003DMT400083778 | Potato | cytosol | 68.99 | 79.46 |
| VIT_03s0017g01060.t01 | Wine grape | cytosol, mitochondrion, plastid | 67.44 | 77.68 |
| Zm00001d018134_P001 | Maize | mitochondrion | 66.67 | 76.79 |
| EES07562 | Sorghum | cytosol, mitochondrion, plastid | 65.89 | 75.89 |
| Os02t0760300-01 | Rice | extracellular | 65.12 | 75.0 |
| KRH10589 | Soybean | cytosol | 72.09 | 66.43 |
| CDY31323 | Canola | extracellular | 59.69 | 58.33 |
| CDY02979 | Canola | mitochondrion | 44.96 | 49.15 |
| TraesCS6A01G314100.1 | Wheat | plastid | 67.44 | 45.08 |
| TraesCS6D01G293400.1 | Wheat | cytosol | 67.44 | 44.62 |
| TraesCS6B01G344100.1 | Wheat | plastid | 67.44 | 44.62 |
| HORVU6Hr1G077340.1 | Barley | mitochondrion | 64.34 | 34.44 |
| CDY40236 | Canola | nucleus | 32.56 | 22.11 |
| CDY41214 | Canola | nucleus | 31.78 | 21.58 |
| CDY15104 | Canola | cytosol | 32.56 | 15.16 |
| CDY34049 | Canola | cytosol | 7.75 | 9.9 |
| CDX78057 | Canola | cytosol | 23.26 | 8.47 |
| CDX73664 | Canola | cytosol | 24.03 | 8.31 |
| CDY29061 | Canola | cytosol | 22.48 | 8.12 |
| CDX90622 | Canola | cytosol | 24.81 | 8.1 |
| CDX86295 | Canola | cytosol | 34.11 | 7.68 |
| CDX85348 | Canola | cytosol | 33.33 | 7.54 |
| CDY52281 | Canola | cytosol | 32.56 | 7.53 |
| CDY15103 | Canola | cytosol | 32.56 | 7.53 |
| CDY15096 | Canola | cytosol | 31.78 | 5.82 |
| CDY00829 | Canola | cytosol | 15.5 | 5.6 |
| CDX76177 | Canola | cytosol | 25.58 | 5.21 |
| CDY13167 | Canola | cytosol | 25.58 | 5.14 |
| CDY07563 | Canola | cytosol | 24.81 | 4.98 |
| CDX67584 | Canola | cytosol | 24.03 | 4.78 |
| CDY64639 | Canola | endoplasmic reticulum, extracellular | 3.88 | 1.87 |
| CDY00831 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:18.12.2 | Gene3D:3.10.50.40 | GO:A0A078FZT9 | UniProt:A0A078FZT9 | EnsemblPlants:CDY18714 | ProteinID:CDY18714 |
| ProteinID:CDY18714.1 | GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016853 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00005798001 |
| InterPro:IPR001179 | PFAM:PF00254 | InterPro:PPIase_FKBP | InterPro:PPIase_FKBP_dom | PFscan:PS50059 | PANTHER:PTHR10516 |
| PANTHER:PTHR10516:SF214 | SUPFAM:SSF54534 | UniParc:UPI0004EDD50B | SEG:seg | : | : |
Description
BnaA09g06810DPeptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:A0A078FZT9]
Coordinates
chrLK032087:+:660859..662381
Molecular Weight (calculated)
14123.0 Da
IEP (calculated)
7.182
GRAVY (calculated)
-0.097
Length
129 amino acids
Sequence
(BLAST)
(BLAST)
001: MYNLGFKIFQ CLKFIQIFLV EKQVIRPGTG PKPTPGQTVT VHCTGFGKGG DLSQQFWSTK DAGQEPFSFQ IGKGDVIKGW DEGVMGMQIG EVARLRCSPD
101: YAYGAGGFPA WGIQPNSVLD FEIEVLSVK
101: YAYGAGGFPA WGIQPNSVLD FEIEVLSVK
001: MGVEKQVIRP GNGPKPAPGQ TVTVHCTGFG KDGDLSQKFW STKDEGQKPF SFQIGKGAVI KGWDEGVIGM QIGEVARLRC SSDYAYGAGG FPAWGIQPNS
101: VLDFEIEVLS VQ
101: VLDFEIEVLS VQ
Arabidopsis Description
FKBP12Peptidyl-prolyl cis-trans isomerase FKBP12 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGG0]
SUBAcon: [mitochondrion,plastid,cytosol]
SUBAcon: [mitochondrion,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.