Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15104 | Canola | cytosol | 40.9 | 52.71 |
| VIT_00s0260g00070.t01 | Wine grape | cytosol | 8.68 | 30.39 |
| CDY15103 | Canola | cytosol | 46.78 | 29.93 |
| CDY52281 | Canola | cytosol | 46.5 | 29.75 |
| AT3G25230.2 | Thale cress | cytosol | 45.66 | 29.0 |
| Solyc06g083190.2.1 | Tomato | extracellular | 43.98 | 27.35 |
| PGSC0003DMT400051809 | Potato | cytosol | 43.7 | 27.18 |
| KXG25560 | Sorghum | cytosol | 41.46 | 26.76 |
| Solyc09g057660.2.1 | Tomato | cytosol | 41.18 | 26.39 |
| GSMUA_Achr7P22780_001 | Banana | cytosol | 40.34 | 26.23 |
| GSMUA_AchrUn_... | Banana | cytosol | 42.3 | 25.99 |
| GSMUA_Achr10P... | Banana | cytosol | 40.9 | 25.98 |
| HORVU7Hr1G053170.6 | Barley | cytosol | 40.9 | 25.8 |
| TraesCS7A01G257100.1 | Wheat | cytosol | 40.34 | 25.76 |
| Os08t0525600-01 | Rice | cytosol, extracellular, plasma membrane, plastid | 41.74 | 25.69 |
| TraesCS7B01G153100.1 | Wheat | golgi | 40.06 | 25.58 |
| TraesCS7D01G257300.1 | Wheat | cytosol | 40.06 | 25.58 |
| Zm00001d031569_P001 | Maize | plasma membrane | 41.18 | 25.34 |
| CDX85348 | Canola | cytosol | 39.5 | 24.74 |
| CDX86295 | Canola | cytosol | 38.94 | 24.26 |
| CDY15096 | Canola | cytosol | 43.14 | 21.84 |
| PGSC0003DMT400053619 | Potato | cytosol | 41.18 | 19.44 |
| CDY46798 | Canola | cytosol | 3.92 | 18.92 |
| CDX84517 | Canola | cytosol, mitochondrion, plastid | 5.6 | 17.86 |
| CDY58272 | Canola | cytosol, mitochondrion, plastid | 5.6 | 17.86 |
| CDY00831 | Canola | cytosol | 8.96 | 16.84 |
| CDX81222 | Canola | cytosol, mitochondrion, plastid | 5.04 | 16.07 |
| CDY18714 | Canola | endoplasmic reticulum, extracellular | 5.6 | 15.5 |
| CDY31323 | Canola | extracellular | 4.76 | 12.88 |
| CDY40236 | Canola | nucleus | 6.72 | 12.63 |
| CDY41214 | Canola | nucleus | 6.44 | 12.11 |
| CDY13167 | Canola | cytosol | 18.77 | 10.44 |
| CDX76177 | Canola | cytosol | 18.21 | 10.27 |
| CDY07563 | Canola | cytosol | 17.93 | 9.97 |
| CDX67584 | Canola | cytosol | 17.65 | 9.71 |
| CDX73664 | Canola | cytosol | 9.24 | 8.85 |
| CDX78057 | Canola | cytosol | 8.12 | 8.19 |
| CDX90622 | Canola | cytosol | 8.96 | 8.1 |
| CDY29061 | Canola | cytosol | 7.84 | 7.84 |
| CDY02979 | Canola | mitochondrion | 2.24 | 6.78 |
| CDY34049 | Canola | cytosol | 1.68 | 5.94 |
| CDY64639 | Canola | endoplasmic reticulum, extracellular | 3.92 | 5.22 |
Protein Annotations
| EnsemblPlants:CDY00829 | EnsemblPlantsGene:GSBRNA2T00110750001 | Gene3D:3.10.50.40 | GO:A0A078EJ76 | InterPro:IPR001179 | InterPro:PPIase_FKBP |
| InterPro:PPIase_FKBP_dom | PANTHER:PTHR10516 | PANTHER:PTHR10516:SF386 | PFAM:PF00254 | PFscan:PS50059 | ProteinID:CDY00829 |
| ProteinID:CDY00829.1 | SEG:seg | SUPFAM:SSF54534 | UniParc:UPI0004EDE41D | MapMan:35.1 | : |
Description
BnaCnng00290D
Coordinates
chrLK031922:+:312683..317900
Molecular Weight (calculated)
39540.6 Da
IEP (calculated)
4.860
GRAVY (calculated)
-0.171
Length
357 amino acids
Sequence
(BLAST)
(BLAST)
001: MIRYIQVEKK TADVTEQQTG VSQVHQGSNQ VAKEMPPVGG MNDDDDMDLG DDASFLKVGE EKEIQQGLKK KLIKEGEGFE TPDKFKAMKL KVIKGWDIAG
101: VWGIWLPANA TLQFDVELLS WSSVKDICKD GGVFNKIREK WETPKDLDEV LVKYESKLED GTVVGKSDGV EFTVKDGYFC PALAKAVKTM KKAEKVLLMV
201: QPQLKLIGKL QDGTCLISSE AINQDEIGNC GYVVYLQVLL INTSLMFLHM RLICSIVEDS SDNLLYGDLP SQSVNSSSWT LCGKLSITCI FLPRPSSKWV
301: TICSFITPCK SSLCTTSIEA VAPSYHSRSS EGKAPFELGY FCSSNILNDE DPLCNLR
101: VWGIWLPANA TLQFDVELLS WSSVKDICKD GGVFNKIREK WETPKDLDEV LVKYESKLED GTVVGKSDGV EFTVKDGYFC PALAKAVKTM KKAEKVLLMV
201: QPQLKLIGKL QDGTCLISSE AINQDEIGNC GYVVYLQVLL INTSLMFLHM RLICSIVEDS SDNLLYGDLP SQSVNSSSWT LCGKLSITCI FLPRPSSKWV
301: TICSFITPCK SSLCTTSIEA VAPSYHSRSS EGKAPFELGY FCSSNILNDE DPLCNLR
001: MDANFEMPPV GGMNDDDDMD FGDGASFLKV GEEKEIQQGL KKKLLKEGEG YETPENGDEV EVHYTGTLLD GTKFDSSRDR ATPFKFTLGQ GQVIKGWDIG
101: IKTMKKGENA VFTIPAELAY GESGSPPTIP ANATLQFDVE LLKWDSVKDI CKDGGVFKKI LAVGEKWENP KDLDEVLVKF EAKLEDGTVV GKSDGVEFTV
201: KDGHFCPALT KAVKTMKKGE KVLLTVKPQY GFGEKGKPAS AGEGAVPPNA TLEINLELVS WKTVSEVTDD NKVVKKVLKE GDGYERPNEG AVVKVKLIGK
301: LQDGTVFLKK GHGENEEPFE FKTDEEQVVD GLDRAVMKMK KGEVALVTID PEYAFGSNES QQELAVVPPN STVTYEVDLL TFDKERESWD MNTEEKIEAA
401: SKKKEEGNSK FKGGKYSLAS KRYEKAVKFI EYDTSFSEEE KKQAKALKVA CNLNDAACKL KLKDYKQAEK LCTKVLELES TNVKALYRRA QAYMELSDLD
501: LAEFDVKKAL EIDPNNREVK LEQKRLKEKM KEFNKKEAKF YGNMFAKLSK E
101: IKTMKKGENA VFTIPAELAY GESGSPPTIP ANATLQFDVE LLKWDSVKDI CKDGGVFKKI LAVGEKWENP KDLDEVLVKF EAKLEDGTVV GKSDGVEFTV
201: KDGHFCPALT KAVKTMKKGE KVLLTVKPQY GFGEKGKPAS AGEGAVPPNA TLEINLELVS WKTVSEVTDD NKVVKKVLKE GDGYERPNEG AVVKVKLIGK
301: LQDGTVFLKK GHGENEEPFE FKTDEEQVVD GLDRAVMKMK KGEVALVTID PEYAFGSNES QQELAVVPPN STVTYEVDLL TFDKERESWD MNTEEKIEAA
401: SKKKEEGNSK FKGGKYSLAS KRYEKAVKFI EYDTSFSEEE KKQAKALKVA CNLNDAACKL KLKDYKQAEK LCTKVLELES TNVKALYRRA QAYMELSDLD
501: LAEFDVKKAL EIDPNNREVK LEQKRLKEKM KEFNKKEAKF YGNMFAKLSK E
Arabidopsis Description
ROF1Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:B3H746]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.