Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G25230.2 | Thale cress | cytosol | 69.47 | 23.49 |
| CDY52281 | Canola | cytosol | 68.95 | 23.48 |
| CDY15103 | Canola | cytosol | 68.42 | 23.3 |
| Bra013224.1-P | Field mustard | cytosol | 67.89 | 22.75 |
| Solyc09g057660.2.1 | Tomato | cytosol | 59.47 | 20.29 |
| Solyc06g083190.2.1 | Tomato | extracellular | 59.47 | 19.69 |
| KXG25560 | Sorghum | cytosol | 56.84 | 19.53 |
| PGSC0003DMT400051809 | Potato | cytosol | 58.95 | 19.51 |
| TraesCS7B01G153100.1 | Wheat | golgi | 56.84 | 19.32 |
| TraesCS7D01G257300.1 | Wheat | cytosol | 56.84 | 19.32 |
| GSMUA_Achr10P... | Banana | cytosol | 56.84 | 19.22 |
| TraesCS7A01G257100.1 | Wheat | cytosol | 56.32 | 19.14 |
| CDX86295 | Canola | cytosol | 57.37 | 19.02 |
| GSMUA_AchrUn_... | Banana | cytosol | 57.89 | 18.93 |
| CDX85348 | Canola | cytosol | 56.32 | 18.77 |
| GSMUA_Achr7P22780_001 | Banana | cytosol | 54.21 | 18.76 |
| HORVU7Hr1G053170.6 | Barley | cytosol | 55.79 | 18.73 |
| Os08t0525600-01 | Rice | cytosol, extracellular, plasma membrane, plastid | 55.79 | 18.28 |
| Zm00001d031569_P001 | Maize | plasma membrane | 55.26 | 18.1 |
| PGSC0003DMT400053619 | Potato | cytosol | 60.0 | 15.08 |
| CDY64639 | Canola | endoplasmic reticulum, extracellular | 17.89 | 12.69 |
| CDX78057 | Canola | cytosol | 17.89 | 9.6 |
| CDY29061 | Canola | cytosol | 17.89 | 9.52 |
| CDY00829 | Canola | cytosol | 16.84 | 8.96 |
| CDY34049 | Canola | cytosol | 4.74 | 8.91 |
| CDX73664 | Canola | cytosol | 17.37 | 8.85 |
| CDX90622 | Canola | cytosol | 17.89 | 8.61 |
| CDY07563 | Canola | cytosol | 23.68 | 7.01 |
| CDX76177 | Canola | cytosol | 22.11 | 6.64 |
| CDY13167 | Canola | cytosol | 22.11 | 6.54 |
| CDX67584 | Canola | cytosol | 22.11 | 6.47 |
| CDY15096 | Canola | cytosol | 20.0 | 5.39 |
| CDY15104 | Canola | cytosol | 6.32 | 4.33 |
| CDY41214 | Canola | nucleus | 4.21 | 4.21 |
| CDY40236 | Canola | nucleus | 4.21 | 4.21 |
| VIT_00s0260g00070.t01 | Wine grape | cytosol | 0.53 | 0.98 |
| CDY02979 | Canola | mitochondrion | 0.0 | 0.0 |
| CDY58272 | Canola | cytosol, mitochondrion, plastid | 0.0 | 0.0 |
| CDY18714 | Canola | endoplasmic reticulum, extracellular | 0.0 | 0.0 |
| CDX84517 | Canola | cytosol, mitochondrion, plastid | 0.0 | 0.0 |
| CDX81222 | Canola | cytosol, mitochondrion, plastid | 0.0 | 0.0 |
| CDY46798 | Canola | cytosol | 0.0 | 0.0 |
| CDY31323 | Canola | extracellular | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | GO:A0A078EI94 | EnsemblPlants:CDY00831 | ProteinID:CDY00831 | ProteinID:CDY00831.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00110752001 | InterPro:IPR001179 |
| InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | PFAM:PF00254 | PFAM:PF00515 | InterPro:PPIase_FKBP |
| InterPro:PPIase_FKBP_dom | PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR43811 | PANTHER:PTHR43811:SF15 | SMART:SM00028 |
| SUPFAM:SSF48452 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_1 | InterPro:TPR_repeat | UniParc:UPI0004EE599B |
Description
BnaCnng00310D
Coordinates
chrLK031922:+:318567..320037
Molecular Weight (calculated)
21831.6 Da
IEP (calculated)
9.665
GRAVY (calculated)
-0.625
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MTAHIDSLSK HKSRADTFPV LPTYVSVEKP IGKLVHTTLS KTSSNTVFLK KGRGEGEEPF EFKTDEEKVI DGLDRAVMKM KKQAKALKVA CNLNDAACKL
101: KLQDYKQLCT KVLELESANV KALYRRAQAY MELADFDLAE FDVKKALEID PNNREVKVEQ RRLKEKMKEF NKKEAKFLRE HVCEAKCKYL
101: KLQDYKQLCT KVLELESANV KALYRRAQAY MELADFDLAE FDVKKALEID PNNREVKVEQ RRLKEKMKEF NKKEAKFLRE HVCEAKCKYL
001: MNNGEKIEAA NRKKEEGNLL YKTQKYERAA KKYNKAAECI ENGKFEGGDE KQVKALRVSC FLNGAACSLK LKNFLETIVL CSEVLDIEFQ NVKALYRRAQ
101: SYIEVGDLIS AEMDINRALE ADPENREVKS LYKAMKLSKA ESDRRDAKLY ANMFALSKVR THFP
101: SYIEVGDLIS AEMDINRALE ADPENREVKS LYKAMKLSKA ESDRRDAKLY ANMFALSKVR THFP
Arabidopsis Description
TPR6Peptidylprolyl isomerase, putative [Source:UniProtKB/TrEMBL;Acc:Q9C650]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.