Factsheet for Zm00001d031569_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568
plasma membrane: 23508561
mitochondrion: 27297264
plasma membrane: 27341663

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG25560	Sorghum	cytosol	91.9	96.38
TraesCS7D01G257300.1	Wheat	cytosol	85.34	88.55
TraesCS7A01G257100.1	Wheat	cytosol	85.0	88.19
TraesCS7B01G153100.1	Wheat	golgi	85.0	88.19
HORVU7Hr1G053170.6	Barley	cytosol	83.62	85.69
Os08t0525600-01	Rice	cytosol, extracellular, plasma membrane, plastid	85.17	85.17
GSMUA_Achr7P22780_001	Banana	cytosol	78.97	83.42
CDY15104	Canola	cytosol	38.28	80.14
GSMUA_Achr10P...	Banana	cytosol	77.07	79.54
CDY52281	Canola	cytosol	75.34	78.32
PGSC0003DMT400051809	Potato	cytosol	77.41	78.22
GSMUA_AchrUn_...	Banana	cytosol	78.28	78.14
CDY15103	Canola	cytosol	75.17	78.14
Solyc06g083190.2.1	Tomato	extracellular	77.24	78.05
Solyc09g057660.2.1	Tomato	cytosol	74.66	77.74
Bra013224.1-P	Field mustard	cytosol	75.0	76.72
AT3G25230.2	Thale cress	cytosol	73.97	76.33
CDX86295	Canola	cytosol	72.93	73.82
CDX85348	Canola	cytosol	72.41	73.68
Bra037477.1-P	Field mustard	cytosol	72.59	73.47
Zm00001d004243_P001	Maize	cytosol	73.79	72.79
AT5G48570.1	Thale cress	cytosol	71.72	71.97
VIT_00s0260g00070.t01	Wine grape	cytosol	12.24	69.61
PGSC0003DMT400053619	Potato	cytosol	74.83	57.41
CDY00831	Canola	cytosol	18.1	55.26
Zm00001d016512_P002	Maize	cytosol	68.79	50.0
Zm00001d018134_P001	Maize	mitochondrion	8.62	44.64
CDY00829	Canola	cytosol	25.34	41.18
Zm00001d004930_P001	Maize	mitochondrion	18.28	28.34
Zm00001d038368_P002	Maize	extracellular	12.07	27.89
Zm00001d047426_P003	Maize	cytosol	28.97	25.61
Zm00001d029272_P002	Maize	cytosol	17.07	15.37

Protein Annotations

Gene3D:1.25.40.10	MapMan:18.12.2	Gene3D:3.10.50.40	Gene3D:3.30.1670.20	UniProt:A0A1D6KJP4	GO:GO:0000413
GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016853	GO:GO:0019538	InterPro:IPR001179
InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	ProteinID:ONM03151.1	PFAM:PF00254	PFAM:PF14559
InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom	PFscan:PS50005	PFscan:PS50059	PFscan:PS50293	PANTHER:PTHR10516
PANTHER:PTHR10516:SF386	SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF54534	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf
InterPro:TPR_repeat	UniParc:UPI000843C33F	EnsemblPlantsGene:Zm00001d031569	EnsemblPlants:Zm00001d031569_P001	EnsemblPlants:Zm00001d031569_T001	SEG:seg

Description

Peptidyl-prolyl isomerase

Coordinates

chr1:+:194687973..194691805

Molecular Weight (calculated)

64595.0 Da

IEP (calculated)

5.012

GRAVY (calculated)

-0.631

Length

580 amino acids

Sequence
(BLAST)

001: MDEDFEMPPA GADEMMGDDE MGDFGGDEGP VMKVGEEKEV GKEGLKKKLL KEGEGWETPE VGDEVEVHYT GTLLDGTKFD SSRDRGEPFK FKLGQGQVIK
101: GWDQGIKTMK KGENAIFTIP PELAYGASGS PPTIPPNATL QFDVELLSWT SVKDICKDGG IFKKILKEGE KWENPKDPDE VLVKYEARLE DGTVVSKSEG
201: VEFTVKDGYF CPALAKAVKT MKKAEKVLLT VKPQYGFGEK GRPAAGEEGA VPPNASLLID LELISWKTVT EIGDDKKILK KVLKEGEGYE RPNEGAVVEV
301: KIIGKLQDGA VFTKKGHDEE PFKFKTDEEE VIAGLDRAVL NMKKGEVALV TIPPEYAFGS TESKQDLAVV PPNSTVIYEV ELISFVKDKE SWDLNNEEKI
401: EAAGKKKEEG NALFKSGKYA RASKRYEKAA KYIEYDTSFS EDEKKQSKQL KISCNLNNAA CKLKLKDYKE AAKLCTKVLE LDSQNVKALY RRVQAYIQLA
501: DLELAEADIK KALEIDPDNR YSLGNGFCKA GSTLITYHAD NFGNNPRDVK LEYKILKEKI KEYNKKDAKF YSNMFAKMTK

Best Arabidopsis Sequence Match ( AT3G25230.1 )
(BLAST)

001: MDANFEMPPV GGMNDDDDMD FGDGASFLKV GEEKEIQQGL KKKLLKEGEG YETPENGDEV EVHYTGTLLD GTKFDSSRDR ATPFKFTLGQ GQVIKGWDIG
101: IKTMKKGENA VFTIPAELAY GESGSPPTIP ANATLQFDVE LLKWDSVKDI CKDGGVFKKI LAVGEKWENP KDLDEVLVKF EAKLEDGTVV GKSDGVEFTV
201: KDGHFCPALT KAVKTMKKGE KVLLTVKPQY GFGEKGKPAS AGEGAVPPNA TLEINLELVS WKTVSEVTDD NKVVKKVLKE GDGYERPNEG AVVKVKLIGK
301: LQDGTVFLKK GHGENEEPFE FKTDEEQVVD GLDRAVMKMK KGEVALVTID PEYAFGSNES QQELAVVPPN STVTYEVDLL TFDKERESWD MNTEEKIEAA
401: SKKKEEGNSK FKGGKYSLAS KRYEKAVKFI EYDTSFSEEE KKQAKALKVA CNLNDAACKL KLKDYKQAEK LCTKVLELES TNVKALYRRA QAYMELSDLD
501: LAEFDVKKAL EIDPNNREVK LEQKRLKEKM KEFNKKEAKF YGNMFAKLSK E

Arabidopsis Description

ROF1Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:B3H746]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.