Factsheet for Zm00001d029272_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
nucleus 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047426_P003	Maize	cytosol	55.28	54.27
Zm00001d031569_P001	Maize	plasma membrane	15.37	17.07
Zm00001d004243_P001	Maize	cytosol	15.37	16.84
Zm00001d004930_P001	Maize	mitochondrion	8.7	14.97
Zm00001d016512_P002	Maize	cytosol	16.46	13.28
Zm00001d038368_P002	Maize	extracellular	1.86	4.78
Zm00001d018134_P001	Maize	mitochondrion	0.0	0.0

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:103635345	MapMan:18.12.2	MapMan:19.4.1.4	Gene3D:3.10.50.40	Gene3D:3.40.630.20
UniProt:A0A1D6K417	ncoils:Coil	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0006464	GO:GO:0006508	GO:GO:0006629	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016787	GO:GO:0016853	GO:GO:0016920
GO:GO:0019538	GO:GO:0030154	GO:GO:0042761	GO:GO:0099402	InterPro:IPR001179	InterPro:IPR011990
InterPro:IPR013026	InterPro:IPR019734	InterPro:IPR036440	ProteinID:ONL98382.1	InterPro:PAS1	PFAM:PF00254
PFAM:PF01470	PFAM:PF07719	PFAM:PF13181	InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom	PFscan:PS50005
PFscan:PS50059	PFscan:PS50293	PANTHER:PTHR10516	PANTHER:PTHR10516:SF268	InterPro:Peptidase_C15	InterPro:Peptidase_C15-like
InterPro:Peptidase_C15-like_sf	SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF53182	SUPFAM:SSF54534	InterPro:TPR-contain_dom
InterPro:TPR-like_helical_dom_sf	InterPro:TPR_2	InterPro:TPR_repeat	UniParc:UPI000844FB04	EnsemblPlantsGene:Zm00001d029272	EnsemblPlants:Zm00001d029272_P002
EnsemblPlants:Zm00001d029272_T002	SEG:seg	:	:	:	:

Description

Peptidyl-prolyl cis-trans isomerase PASTICCINO1

Coordinates

chr1:+:64438231..64479765

Molecular Weight (calculated)

71980.2 Da

IEP (calculated)

6.191

GRAVY (calculated)

-0.372

Length

644 amino acids

Sequence
(BLAST)

001: MGIGTMARKE KAIVFVSNTY LTKSSLMPEL EGLEEVHFYI ELVQFIQVRD MLGDGRLIKR RVVDGKGEFP MDCPLHDSLL RVHYKGILLD EPKSVFYDTR
101: ADNDGEPLEF CSGEGLVPEG FEMCVRLMLP GEKSVVTCPP DFAYDKFPRP ANVPEGAHVQ WEIELLGFEM PKDWTGLTFE EIMDEADKIK NTGNRLFKEG
201: KFELAKAKYD KVLREYNHVH PHDDEEGKIF ANSRNSLHLN VAFCYQKMGE YRKSIETCNK VLDTNPVHAK ALYRQGMSYM LLGEFDDARN DFEKMITVDK
301: SSEPDATAAL LKLKQKEQEA EKKARKQFKG LFDKKPGEIS EVGVESEGGK DAGDARGSGE ATSADRGANT MDSPTRESEV TLEIMVVKMN CPEGSRFSSG
401: RGRGHLLLLN ATLHIHTYRW VPTSEGPSPV TTTVHVTGFK KFHGVADNPT EKIVRNLASF MDTRGLPKGL VLGSCTVLEA AGQGALGPLY QLLESTVVSG
501: RGRGMPAQER VILLHFGANS GSHRFALENR AVNEATFRCP DELGWKPQRT PIISSDGNIL HARQTTLPLK EISKSLQQMG YDVMPSDDAG RFVCNYVYYH
601: SLKFAEKHGI TSLFVHFPLF LAIDEEVQMQ FVASLLEVLA SLNF

Best Arabidopsis Sequence Match ( AT1G56700.1 )
(BLAST)

001: MGSEGPTGVT IHITGFKKFH GVAENPTEKM ANNLKEYLAK NCVSKDVNLG SCTVLETAGQ GALASLYQLL QSAVNTKESE SLTGKTIWVH FGVNSGATKF
101: AIEQQAVNEA TFRCPDELGW KPQNLPIVPS DGPISTVRKT NLPVEEITKA LEKNGFEVIT SDDAGRFVCN YVYYHSLRFA EQNKTRSLFV HVPLFVAVDE
201: ETQMRFTVSL LEVLASICK

Arabidopsis Description

At1g56700 [Source:UniProtKB/TrEMBL;Acc:Q9FXC0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.