Factsheet for VIT_00s0260g00070.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY15104	Canola	cytosol	68.63	25.27
VIT_03s0017g01060.t01	Wine grape	cytosol, mitochondrion, plastid	19.61	17.86
VIT_00s0769g00010.t01	Wine grape	peroxisome	92.16	16.46
Solyc09g057660.2.1	Tomato	cytosol	82.35	15.08
PGSC0003DMT400051809	Potato	cytosol	80.39	14.29
GSMUA_Achr7P22780_001	Banana	cytosol	75.49	14.03
Solyc06g083190.2.1	Tomato	extracellular	78.43	13.94
GSMUA_AchrUn_...	Banana	cytosol	77.45	13.6
CDY15103	Canola	cytosol	73.53	13.44
CDY52281	Canola	cytosol	73.53	13.44
GSMUA_Achr10P...	Banana	cytosol	72.55	13.17
TraesCS7B01G153100.1	Wheat	golgi	71.57	13.06
TraesCS7A01G257100.1	Wheat	cytosol	71.57	13.06
KXG25560	Sorghum	cytosol	70.59	13.02
AT3G25230.2	Thale cress	cytosol	71.57	12.99
HORVU7Hr1G053170.6	Barley	cytosol	71.57	12.9
TraesCS7D01G257300.1	Wheat	cytosol	70.59	12.88
Bra013224.1-P	Field mustard	cytosol	71.57	12.87
Zm00001d031569_P001	Maize	plasma membrane	69.61	12.24
Os08t0525600-01	Rice	cytosol, extracellular, plasma membrane, plastid	69.61	12.24
PGSC0003DMT400053619	Potato	cytosol	85.29	11.51
VIT_13s0019g01900.t01	Wine grape	cytosol	19.61	10.64
CDY00829	Canola	cytosol	30.39	8.68
VIT_18s0001g08830.t01	Wine grape	cytosol	48.04	8.17
VIT_08s0040g00790.t01	Wine grape	cytosol	35.29	7.56
VIT_13s0064g00580.t01	Wine grape	cytosol	23.53	6.58
VIT_08s0007g01460.t01	Wine grape	nucleus	30.39	5.0
VIT_00s0958g00020.t01	Wine grape	cytosol, peroxisome	6.86	2.05
CDY00831	Canola	cytosol	0.98	0.53

Protein Annotations

MapMan:18.12.2	Gene3D:3.30.1670.20	ProteinID:CCB62822	ProteinID:CCB62822.1	UniProt:F6I7A4	EMBL:FN596771
GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016853	GO:GO:0019538	InterPro:IPR001179	PFAM:PF00254
InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom	PFscan:PS50059	PANTHER:PTHR10516	PANTHER:PTHR10516:SF338	SUPFAM:SSF54534
UniParc:UPI0002108EEB	ArrayExpress:VIT_00s0260g00070	EnsemblPlantsGene:VIT_00s0260g00070	EnsemblPlants:VIT_00s0260g00070.t01	SEG:seg	:

Description

Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:F6I7A4]

Coordinates

chrUn:+:18589445..18590826

Molecular Weight (calculated)

11613.5 Da

IEP (calculated)

4.347

GRAVY (calculated)

-1.200

Length

102 amino acids

Sequence
(BLAST)

001: MDEDFDIPAA EEMNDDMDLP DESPILKVGE EKEIGKQGLK KKLVKEGEGW DTPENGDEVE VHYTGTLLDG TQFDSSRDRG TPFKFTLGQE KKKKQKGRQY
101: TF

Best Arabidopsis Sequence Match ( AT5G48570.1 )
(BLAST)

001: MEDDFDTQNQ FPEEEPEEMD MDLPDNDEAD SAPYLKIGEE MEIGKSGLKK KLVKECEKWD TPENGDEVEV HYTGTLLDGT KFDSSRDRGT PFKFTLGQGH
101: VIKGWDLGIK TMKKGENAIF TIPPELAYGE TGSPPTIPPN ATLQFDVELI AWRSVKDICG DGGVSKKIIV EGEKWEKPKD LDEVYVKYEA RLEDGTIVGK
201: SDGVEFTVKE GHFCPALSKA VKTMKRGEKV LLTVKPQYGF GEFGRPASDG LQAAIPPNAT LQIDLELVSW KTVVEVTDDR KVIKKILKEG EGYERPNEGA
301: IVKLKLIGKL QDGTTVFVKK GHEEDEEPFE FKIDEEQVIE GLEKAVMGMK KGEVALITIS PEYAFGSSES KQELAVIPPN STVYYEVELV SFIKEKESWD
401: MNTQERIEAA GKKKEEGNVL FKAGKYARAS KRYERGVKYI EYDSTFDEEE KKKSKDLKIA CNLNDAACKL KLKDYKEAAK LSTKVLEMDS RNVKAMYRRA
501: HAYLETADLD LAELDIKKAL EIDPDNKEVK IEYKKLKEKV KEYNKKDAKF YSNMLSKMLE PHKGTQKEAQ AMSIDTKA

Arabidopsis Description

FKBP65Peptidyl-prolyl cis-trans isomerase FKBP65 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJL3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.