Factsheet for VIT_08s0040g00790.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plasma membrane 1
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400018490	Potato	cytosol	60.08	59.96
Solyc10g078250.1.1	Tomato	cytosol	11.34	59.34
KRH66687	Soybean	cytosol	66.6	58.7
KRG95045	Soybean	cytosol	15.34	52.9
Solyc10g078260.1.1	Tomato	cytosol	44.96	49.54
VIT_00s0769g00010.t01	Wine grape	peroxisome	55.25	46.06
VIT_03s0017g01060.t01	Wine grape	cytosol, mitochondrion, plastid	9.87	41.96
VIT_00s0958g00020.t01	Wine grape	cytosol, peroxisome	30.04	41.81
VIT_00s0260g00070.t01	Wine grape	cytosol	7.56	35.29
VIT_18s0001g08830.t01	Wine grape	cytosol	44.12	35.0
VIT_13s0019g01900.t01	Wine grape	cytosol	10.5	26.6
VIT_08s0007g01460.t01	Wine grape	nucleus	31.09	23.87
VIT_13s0064g00580.t01	Wine grape	cytosol	13.45	17.53

Protein Annotations

Gene3D:1.25.40.10	MapMan:18.12.2	Gene3D:3.10.50.40	ProteinID:CCB57132	ProteinID:CCB57132.1	UniProt:F6HQQ1
EMBL:FN596008	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005528	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016853	GO:GO:0019538
GO:GO:0061077	InterPro:IPR001179	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	PFAM:PF00254
PFAM:PF13181	InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom	PFscan:PS50005	PFscan:PS50059	PFscan:PS50293
PANTHER:PTHR10516	PANTHER:PTHR10516:SF312	SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF54534	InterPro:TPR-contain_dom
InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI000210967E	ArrayExpress:VIT_08s0040g00790	EnsemblPlantsGene:VIT_08s0040g00790	EnsemblPlants:VIT_08s0040g00790.t01

Description

Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:F6HQQ1]

Coordinates

chr8:-:11738050..11743239

Molecular Weight (calculated)

53492.0 Da

IEP (calculated)

5.346

GRAVY (calculated)

-0.450

Length

476 amino acids

Sequence
(BLAST)

001: MESEARPDTD IGSQGLRKRI LQMGHSWLTP FPGDEVQVHY SGRVEGGAYF DSSRDRGAPF WFKLGQCEVI KGWEEGVATM KKGERAIFTI PPDLAYGETG
101: LPPLIPPNST LIYDIEMLSW NTIRDLTGDG GILKKIMTEG EGWATPKDGD EVLVKYEVRL ENGTEVSKCD EGSEFHLGDD LPCPAISKAV KTMRRGEKAE
201: LSVRFSYGFK QIGNEVTRTD GAIPPNSNLI ICLELISWKS VIDIMGDKKV LKKIMKVGEG FDRPSEGSLA KVAYIGKLEN GTVFERKGSR EEPLELLCFE
301: EQINEGLDRA IMTMRKGEQA LVTIQADGHE VSGMVSANSL HHYEVELIDF TKAEKYIEFD HSFTDEEKVQ ANALRISCNL NNAACKLKLG EYLEASKQCT
401: KVLELDPSNI KALYRRSQSY LRISELEKAE ADIRRALTID PSNRDVKLVY KELQVKQKEY IRHQTQIFST MLSRMG

Best Arabidopsis Sequence Match ( AT5G48570.1 )
(BLAST)

001: MEDDFDTQNQ FPEEEPEEMD MDLPDNDEAD SAPYLKIGEE MEIGKSGLKK KLVKECEKWD TPENGDEVEV HYTGTLLDGT KFDSSRDRGT PFKFTLGQGH
101: VIKGWDLGIK TMKKGENAIF TIPPELAYGE TGSPPTIPPN ATLQFDVELI AWRSVKDICG DGGVSKKIIV EGEKWEKPKD LDEVYVKYEA RLEDGTIVGK
201: SDGVEFTVKE GHFCPALSKA VKTMKRGEKV LLTVKPQYGF GEFGRPASDG LQAAIPPNAT LQIDLELVSW KTVVEVTDDR KVIKKILKEG EGYERPNEGA
301: IVKLKLIGKL QDGTTVFVKK GHEEDEEPFE FKIDEEQVIE GLEKAVMGMK KGEVALITIS PEYAFGSSES KQELAVIPPN STVYYEVELV SFIKEKESWD
401: MNTQERIEAA GKKKEEGNVL FKAGKYARAS KRYERGVKYI EYDSTFDEEE KKKSKDLKIA CNLNDAACKL KLKDYKEAAK LSTKVLEMDS RNVKAMYRRA
501: HAYLETADLD LAELDIKKAL EIDPDNKEVK IEYKKLKEKV KEYNKKDAKF YSNMLSKMLE PHKGTQKEAQ AMSIDTKA

Arabidopsis Description

FKBP65Peptidyl-prolyl cis-trans isomerase FKBP65 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJL3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.