Factsheet for VIT_00s0769g00010.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
cytosol 2
peroxisome 2
plasma membrane 1
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0958g00020.t01	Wine grape	cytosol, peroxisome	59.89	100.0
VIT_00s0260g00070.t01	Wine grape	cytosol	16.46	92.16
VIT_08s0040g00790.t01	Wine grape	cytosol	46.06	55.25
VIT_18s0001g08830.t01	Wine grape	cytosol	52.71	50.17
VIT_03s0017g01060.t01	Wine grape	cytosol, mitochondrion, plastid	7.88	40.18
VIT_13s0019g01900.t01	Wine grape	cytosol	11.91	36.17
VIT_13s0064g00580.t01	Wine grape	cytosol	18.39	28.77
VIT_08s0007g01460.t01	Wine grape	nucleus	30.47	28.06

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100249097	wikigene:100249097	EntrezGene:100266654	wikigene:100266654	MapMan:18.12.2
Gene3D:3.10.50.40	Gene3D:3.30.1670.20	ProteinID:CBI29552	ProteinID:CBI29552.3	ProteinID:CBI41091	ProteinID:CBI41091.3
ncoils:Coil	UniProt:D7TGC8	EMBL:FN595824	EMBL:FN596832	GO:GO:0000413	GO:GO:0003674
GO:GO:0003755	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005528	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016853	GO:GO:0019538	GO:GO:0061077	InterPro:IPR001179	InterPro:IPR011990
InterPro:IPR013026	InterPro:IPR019734	EntrezGene:LOC100249097	wikigene:LOC100249097	EntrezGene:LOC100266654	wikigene:LOC100266654
PFAM:PF00254	PFAM:PF00515	InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom	PFscan:PS50005	PFscan:PS50059
PFscan:PS50293	PANTHER:PTHR10516	PANTHER:PTHR10516:SF338	SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF54534
TIGR:TC52535	TIGR:TC61697	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_1	InterPro:TPR_repeat
UniParc:UPI0001BE30B2	ArrayExpress:VIT_00s0769g00010	EnsemblPlantsGene:VIT_00s0769g00010	EnsemblPlants:VIT_00s0769g00010.t01	unigene:Vvi.13488	unigene:Vvi.25231
unigene:Vvi.6717	RefSeq:XP_002263566	RefSeq:XP_002263566.2	SEG:seg	:	:

Description

Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:D7TGC8]

Coordinates

chrUn:-:35197800..35203152

Molecular Weight (calculated)

64044.0 Da

IEP (calculated)

4.830

GRAVY (calculated)

-0.678

Length

571 amino acids

Sequence
(BLAST)

001: MDEDFDIPAA EEMNDDMDLP DESPILKVGE EKEIGKQGLK KKLVKEGEGW DTPENGDEVE VHYTGTLLDG TQFDSSRDRG TPFKFTLGQG QVIKGWDQGI
101: KTMKKGENAI FTIPPELAYG ESGSSTTIPP NATLQFDVEL LSWTSVKDIC KDGGIFKKIV TEGDKWENPK DLDEVFVKYE ARLEDGTLVA KSDGVEFTVK
201: EDYFCPALSK AVKTMKKGEK VILTVKPQYG FGEKGKPASG EEGAVPPNAT LEITLELVSW KTVTEVTDDK KVIKKILKEG EGYERPNEGA VVKLKLIGKL
301: QDGTVFLKKG HGEGEDLFEF KTDDEQVIDG LDRAVMTMKK GEVALLTIHS DYAFGSSESS QELAVVPPNS TVYYEVELES FVKDKESWDM NTEEKIEAAG
401: KKKEEGNVLF KAGKYARASK RYEKAAKYIE YDSSFGEEEK KQAKTLKVTC NLNNAACKLK LKDYKEAEKL CTKVLDIQSK NVKALYRRAQ AYIHLADLDL
501: AEFDIKKALE IDPDNRDVKL EYRTLKEKMK EYNKKEAKFY GNMFARMNKL EALETNKATK EAEPMSIDSK A

Best Arabidopsis Sequence Match ( AT5G48570.1 )
(BLAST)

001: MEDDFDTQNQ FPEEEPEEMD MDLPDNDEAD SAPYLKIGEE MEIGKSGLKK KLVKECEKWD TPENGDEVEV HYTGTLLDGT KFDSSRDRGT PFKFTLGQGH
101: VIKGWDLGIK TMKKGENAIF TIPPELAYGE TGSPPTIPPN ATLQFDVELI AWRSVKDICG DGGVSKKIIV EGEKWEKPKD LDEVYVKYEA RLEDGTIVGK
201: SDGVEFTVKE GHFCPALSKA VKTMKRGEKV LLTVKPQYGF GEFGRPASDG LQAAIPPNAT LQIDLELVSW KTVVEVTDDR KVIKKILKEG EGYERPNEGA
301: IVKLKLIGKL QDGTTVFVKK GHEEDEEPFE FKIDEEQVIE GLEKAVMGMK KGEVALITIS PEYAFGSSES KQELAVIPPN STVYYEVELV SFIKEKESWD
401: MNTQERIEAA GKKKEEGNVL FKAGKYARAS KRYERGVKYI EYDSTFDEEE KKKSKDLKIA CNLNDAACKL KLKDYKEAAK LSTKVLEMDS RNVKAMYRRA
501: HAYLETADLD LAELDIKKAL EIDPDNKEVK IEYKKLKEKV KEYNKKDAKF YSNMLSKMLE PHKGTQKEAQ AMSIDTKA

Arabidopsis Description

FKBP65Peptidyl-prolyl cis-trans isomerase FKBP65 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJL3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.