Factsheet for VIT_18s0001g08830.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plasma membrane 1
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400027559	Potato	cytosol, nucleus, plastid	62.5	64.21
Solyc04g077660.2.1	Tomato	cytosol	61.33	63.01
AT1G58450.1	Thale cress	cytosol	16.83	61.59
KRG88759	Soybean	cytosol	59.67	61.51
KRH05556	Soybean	cytosol	58.0	59.69
GSMUA_Achr8P04930_001	Banana	cytosol	57.0	53.86
VIT_00s0958g00020.t01	Wine grape	cytosol, peroxisome	30.33	53.22
VIT_00s0769g00010.t01	Wine grape	peroxisome	50.17	52.71
VIT_00s0260g00070.t01	Wine grape	cytosol	8.17	48.04
VIT_08s0040g00790.t01	Wine grape	cytosol	35.0	44.12
VIT_03s0017g01060.t01	Wine grape	cytosol, mitochondrion, plastid	6.17	33.04
VIT_08s0007g01460.t01	Wine grape	nucleus	25.67	24.84
VIT_13s0064g00580.t01	Wine grape	cytosol	14.83	24.38
VIT_13s0019g01900.t01	Wine grape	cytosol	7.5	23.94

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100250536	wikigene:100250536	MapMan:18.12.2	Gene3D:3.10.50.40	Gene3D:3.30.1670.20
ProteinID:CBI19379	ProteinID:CBI19379.3	UniProt:E0CP01	EMBL:FN595227	GO:GO:0000413	GO:GO:0003674
GO:GO:0003755	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005528	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016853	GO:GO:0019538	GO:GO:0061077	InterPro:IPR001179	InterPro:IPR011990
InterPro:IPR013026	InterPro:IPR019734	EntrezGene:LOC100250536	wikigene:LOC100250536	PFAM:PF00254	InterPro:PPIase_FKBP
InterPro:PPIase_FKBP_dom	PFscan:PS50005	PFscan:PS50059	PFscan:PS50293	PANTHER:PTHR10516	PANTHER:PTHR10516:SF393
SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF54534	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat
UniParc:UPI00015C815D	ArrayExpress:VIT_18s0001g08830	EnsemblPlantsGene:VIT_18s0001g08830	EnsemblPlants:VIT_18s0001g08830.t01	unigene:Vvi.13976	RefSeq:XP_002283423
RefSeq:XP_002283423.1	SEG:seg	:	:	:	:

Description

Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:E0CP01]

Coordinates

chr18:+:7324294..7332148

Molecular Weight (calculated)

66086.0 Da

IEP (calculated)

4.628

GRAVY (calculated)

-0.309

Length

600 amino acids

Sequence
(BLAST)

001: MVVVDGASNV SQLGEVDDLD EEPGEVIESA PPLCVGQERE LNNSGLKKRL LHKGIGWETP DFGDEVTVHY VGTLLDGGTF DSTRDRNEPS TFTLGRGEVV
101: DGLDQGIVTM TQEEIALFTV PPHLGYGEAG RQGVPPNSVV QFQVQLISWI TVVDVCRDGG IIKKILEKGN RNVQPGDLDE LLVKYKVKLV DDTIVAQTPE
201: EGIEFYMKDG QFCSAMPKAI KTMKSGEKVK LIVQPQYAFG DVGRDAENEF PLIPPSSVLI IDLELVSFKP VIDVTGDSKV FKKILVEGAN TIAANEGATV
301: TVRYTAKLED GTIFEKKGFD GENPLQFITD EEQVISGLDQ AVATMTKGER SIVTIHPEYG YGSIEVMQDI SIVPPSSIII YEVEMLDFVK EKAPWEMSDQ
401: EKIETAGRKK EEGNLLFKSG KYQRARKKYD KAADYVSECG IFGDGDHKVV ETLQVSCWLN GAACCLKLNN FPGAIKLCSK VLDIEFHNVK ALYRRAQAYM
501: KTADLDLAQL DIKKALEADP QNREVKLMQK NLKQLQGESN KRDAKLYSNM FAPMRNDTAV ATKKLKVEKA EDKKGDAEVV ATEMEKVAVS SDSGMAVDSC

Best Arabidopsis Sequence Match ( AT5G48570.1 )
(BLAST)

001: MEDDFDTQNQ FPEEEPEEMD MDLPDNDEAD SAPYLKIGEE MEIGKSGLKK KLVKECEKWD TPENGDEVEV HYTGTLLDGT KFDSSRDRGT PFKFTLGQGH
101: VIKGWDLGIK TMKKGENAIF TIPPELAYGE TGSPPTIPPN ATLQFDVELI AWRSVKDICG DGGVSKKIIV EGEKWEKPKD LDEVYVKYEA RLEDGTIVGK
201: SDGVEFTVKE GHFCPALSKA VKTMKRGEKV LLTVKPQYGF GEFGRPASDG LQAAIPPNAT LQIDLELVSW KTVVEVTDDR KVIKKILKEG EGYERPNEGA
301: IVKLKLIGKL QDGTTVFVKK GHEEDEEPFE FKIDEEQVIE GLEKAVMGMK KGEVALITIS PEYAFGSSES KQELAVIPPN STVYYEVELV SFIKEKESWD
401: MNTQERIEAA GKKKEEGNVL FKAGKYARAS KRYERGVKYI EYDSTFDEEE KKKSKDLKIA CNLNDAACKL KLKDYKEAAK LSTKVLEMDS RNVKAMYRRA
501: HAYLETADLD LAELDIKKAL EIDPDNKEVK IEYKKLKEKV KEYNKKDAKF YSNMLSKMLE PHKGTQKEAQ AMSIDTKA

Arabidopsis Description

FKBP65Peptidyl-prolyl cis-trans isomerase FKBP65 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJL3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.