Factsheet for Solyc04g077660.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plasma membrane 1
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400027559	Potato	cytosol, nucleus, plastid	95.21	95.21
VIT_18s0001g08830.t01	Wine grape	cytosol	63.01	61.33
KRG88759	Soybean	cytosol	58.39	58.59
KRH05556	Soybean	cytosol	56.34	56.43
AT1G58450.1	Thale cress	cytosol	15.41	54.88
Solyc06g083190.2.1	Tomato	extracellular	50.51	51.39
GSMUA_Achr8P04930_001	Banana	cytosol	55.65	51.18
Solyc09g057660.2.1	Tomato	cytosol	48.8	51.17
Solyc09g092690.2.1	Tomato	cytosol	47.95	48.19
Solyc10g078250.1.1	Tomato	cytosol	6.51	41.76
Solyc01g105710.2.1	Tomato	extracellular	6.68	34.82
Solyc10g078260.1.1	Tomato	cytosol	25.51	34.49
Solyc11g011420.1.1	Tomato	cytosol, plastid	24.49	24.49
Solyc01g087470.2.1	Tomato	cytosol	13.01	23.38
Solyc04g011620.2.1	Tomato	nucleus	7.02	22.04

Protein Annotations

Gene3D:1.25.40.10	MapMan:18.12.2	Gene3D:3.10.50.40	Gene3D:3.30.1670.20	ncoils:Coil	GO:GO:0000413
GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005528
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016853	GO:GO:0019538	GO:GO:0061077	InterPro:IPR001179
InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	UniProt:K4BUK3	PFAM:PF00254	InterPro:PPIase_FKBP
InterPro:PPIase_FKBP_dom	PFscan:PS50005	PFscan:PS50059	PFscan:PS50293	PANTHER:PTHR10516	PANTHER:PTHR10516:SF393
SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF54534	EnsemblPlantsGene:Solyc04g077660.2	EnsemblPlants:Solyc04g077660.2.1	InterPro:TPR-contain_dom
InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0002766667	SEG:seg	:	:

Description

Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:K4BUK3]

Coordinates

chr4:+:62593857..62602559

Molecular Weight (calculated)

65333.2 Da

IEP (calculated)

5.029

GRAVY (calculated)

-0.441

Length

584 amino acids

Sequence
(BLAST)

001: MVEFSRANAQ AFIDEDDELE EEPGEEIDSA PPLNVGEERE INSNGLKKKL LKHGHGWETP EFGDEVTVHY VGILRDGTKS VSTWDKGEPF TFKLGQEKVS
101: AGLDRGIVTM RKGEGALFTL PLETAFGLSD SDAVSSNRVV QFEVELVSWI TVVDVCKDGG IIKKILEKGE MIGPPGDLDE VLVRYVVRLL DGITVAKTPE
201: HGVEFYVKDG HFCQALPKAI KTMRKGEKVN LLIQPRYASV DRDKDSESSV PSIPPSSILS IDLELVSFKP VINVTCDLGV LKKILKEGEG TLTADEGAAV
301: TIRYTAKLVD GTLLEKRGFD GENALKFITD EEQVVAGLDQ AVTTMKKGEH AIVTVKPDYG FGNTEVKRDL AMVPPCSTII FEVEMLEFTK EKDPREMNKH
401: ERIQMAQRKK EEGNLLFKNG KYQRAMKKYE KATDCINEDE HFEDDDQKIV KSLRVSCWLN GAAACLKQSY FQEAIKQCCK VLEVESCNVK ALYRRAQAFM
501: ETADLHLAEL DIKKALAIEP QNREVKLIQK TLKQLQSESN KRDAKLYTTM FARLSNENSS AAKKLKVEET ESKNEENVGE INMH

Best Arabidopsis Sequence Match ( AT3G25230.1 )
(BLAST)

001: MDANFEMPPV GGMNDDDDMD FGDGASFLKV GEEKEIQQGL KKKLLKEGEG YETPENGDEV EVHYTGTLLD GTKFDSSRDR ATPFKFTLGQ GQVIKGWDIG
101: IKTMKKGENA VFTIPAELAY GESGSPPTIP ANATLQFDVE LLKWDSVKDI CKDGGVFKKI LAVGEKWENP KDLDEVLVKF EAKLEDGTVV GKSDGVEFTV
201: KDGHFCPALT KAVKTMKKGE KVLLTVKPQY GFGEKGKPAS AGEGAVPPNA TLEINLELVS WKTVSEVTDD NKVVKKVLKE GDGYERPNEG AVVKVKLIGK
301: LQDGTVFLKK GHGENEEPFE FKTDEEQVVD GLDRAVMKMK KGEVALVTID PEYAFGSNES QQELAVVPPN STVTYEVDLL TFDKERESWD MNTEEKIEAA
401: SKKKEEGNSK FKGGKYSLAS KRYEKAVKFI EYDTSFSEEE KKQAKALKVA CNLNDAACKL KLKDYKQAEK LCTKVLELES TNVKALYRRA QAYMELSDLD
501: LAEFDVKKAL EIDPNNREVK LEQKRLKEKM KEFNKKEAKF YGNMFAKLSK E

Arabidopsis Description

ROF1Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:B3H746]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.