CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plasma membrane 1
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG88759	Soybean	cytosol	91.94	92.1
PGSC0003DMT400027559	Potato	cytosol, nucleus, plastid	58.32	58.22
VIT_18s0001g08830.t01	Wine grape	cytosol	59.69	58.0
Solyc04g077660.2.1	Tomato	cytosol	56.43	56.34
AT1G58450.1	Thale cress	cytosol	15.44	54.88
KRH46622	Soybean	cytosol, nucleus	47.86	51.29
KRG99620	Soybean	cytosol	47.34	50.74
GSMUA_Achr8P04930_001	Banana	cytosol	53.69	49.29
KRH07424	Soybean	cytosol	47.68	48.43
KRH66151	Soybean	nucleus	48.03	48.11
KRH42713	Soybean	cytosol	46.48	47.54
KRH58815	Soybean	peroxisome	46.48	47.54
KRH66687	Soybean	cytosol	34.82	37.59
KRH21780	Soybean	cytosol, mitochondrion, plastid	5.49	28.57
KRH62430	Soybean	cytosol	27.1	25.4
KRH75755	Soybean	cytosol, endoplasmic reticulum	27.1	25.4
KRH30990	Soybean	cytosol	7.55	23.4
KRG97894	Soybean	cytosol	7.2	22.34
KRH23877	Soybean	cytosol, endoplasmic reticulum, nucleus	14.07	22.16
KRH10589	Soybean	cytosol	5.32	22.14
KRH39924	Soybean	endoplasmic reticulum	13.72	21.62
KRG95045	Soybean	cytosol	4.8	20.29

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100793684	MapMan:18.12.2	Gene3D:3.10.50.40	EMBL:ACUP02010758	ncoils:Coil
EnsemblPlantsGene:GLYMA_17G233800	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005528	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016853	GO:GO:0019538
GO:GO:0061077	InterPro:IPR001179	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	UniProt:K7MNJ9
EnsemblPlants:KRH05556	ProteinID:KRH05556	ProteinID:KRH05556.1	ProteinID:KRH05557.1	PFAM:PF00254	InterPro:PPIase_FKBP
InterPro:PPIase_FKBP_dom	PFscan:PS50005	PFscan:PS50059	PFscan:PS50293	PANTHER:PTHR10516	PANTHER:PTHR10516:SF393
SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF54534	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat
UniParc:UPI000233E512	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:+:38930183..38939083

Molecular Weight (calculated)

64261.9 Da

IEP (calculated)

4.541

GRAVY (calculated)

-0.276

Length

583 amino acids

Sequence
(BLAST)

001: MVVLLSEEDE FDEEPGEVVD SAPPQKVGEE REFSGFKKKL FKPGQGLEFP NFDDVVTVRC VGIGTLLDGT TFDSTRERDQ PRTFALGKDD IGAGLDRAII
101: TMKKGEVALF TLPGDGGDGD VSLDSDDSSA VRFEVELVSW ITVVDVCKDG GVVKKILEKG SGIERPGDLD EVLVKYRVVL GDGTVVVETL EGGVEFHMKD
201: GHLFPILPKV IMTMTRGEKA ELILQPQYAF GEKGREAGSG LCSIPPNSVL HVNIELVSFK PVINVTGDSK VIKKILKEGE GAFTANEGAN VTVSFTAMLE
301: DGTVFEKRGI GETLPLEFIT DEEQVITGLD RAVATMKKGE RAIISIHPDY AFGDVEVRRD IAIVPPGSNV VYDIEMMDFI KEKAPWELNS KEKIEVAGRM
401: KEEGNVLFKV GNYQRAGKKY EKAADFVDED GSFGFDEQKQ AQTLKVSCWL NSAACSLKLN DFPGAIKLCS QVLDVEFCNV KAFYRRAQAY IETGDYLLAD
501: VDIKKALVVD PQNRDVKVIQ KKLKQLQADS DKKDAKLYEN MLARKTKDPS MAIKRLKVEK DQGENEEVAR MEIDEVADSA VIQ

Best Arabidopsis Sequence Match ( AT1G58450.1 )
(BLAST)

001: MNNGEKIEAA NRKKEEGNLL YKTQKYERAA KKYNKAAECI ENGKFEGGDE KQVKALRVSC FLNGAACSLK LKNFLETIVL CSEVLDIEFQ NVKALYRRAQ
101: SYIEVGDLIS AEMDINRALE ADPENREVKS LYKAMKLSKA ESDRRDAKLY ANMFALSKVR THFP

Arabidopsis Description

TPR6Peptidylprolyl isomerase, putative [Source:UniProtKB/TrEMBL;Acc:Q9C650]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.