CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plasma membrane 1
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH66151	Soybean	nucleus	94.25	92.96
KRH46622	Soybean	cytosol, nucleus	81.36	85.85
KRG99620	Soybean	cytosol	80.49	84.93
VIT_00s0958g00020.t01	Wine grape	cytosol, peroxisome	48.95	82.16
KRH58815	Soybean	peroxisome	74.04	74.56
KRH42713	Soybean	cytosol	73.69	74.21
PGSC0003DMT400080935	Potato	cytosol	74.04	73.28
Solyc09g092690.2.1	Tomato	cytosol	73.0	72.12
KRH66687	Soybean	cytosol	50.17	53.33
KRG95045	Soybean	cytosol	11.67	48.55
KRG88759	Soybean	cytosol	48.61	47.94
KRH05556	Soybean	cytosol	48.43	47.68
KRH21780	Soybean	cytosol, mitochondrion, plastid	8.19	41.96
KRH30990	Soybean	cytosol	11.5	35.11
KRG97894	Soybean	cytosol	11.5	35.11
Os01t0562400-01	Rice	mitochondrion	34.49	34.38
KRH10589	Soybean	cytosol	8.19	33.57
Os01t0563000-04	Rice	plasma membrane	35.71	31.44
KRH23877	Soybean	cytosol, endoplasmic reticulum, nucleus	17.77	27.57
KRH39924	Soybean	endoplasmic reticulum	17.6	27.3
KRH75755	Soybean	cytosol, endoplasmic reticulum	29.09	26.85
KRH62430	Soybean	cytosol	29.09	26.85
Os01t0564300-01	Rice	cytosol, plasma membrane	18.47	25.12

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100803189	MapMan:18.12.2	Gene3D:3.10.50.40	Gene3D:3.30.1670.20	EMBL:ACUP02009988
ncoils:Coil	EnsemblPlantsGene:GLYMA_16G088000	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005528	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016853
GO:GO:0019538	GO:GO:0061077	UniProt:I1MM91	InterPro:IPR001179	InterPro:IPR011990	InterPro:IPR013026
InterPro:IPR019734	EnsemblPlants:KRH07424	ProteinID:KRH07424	ProteinID:KRH07424.1	PFAM:PF00254	PFAM:PF13181
InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom	PFscan:PS50005	PFscan:PS50059	PFscan:PS50293	PANTHER:PTHR10516
PANTHER:PTHR10516:SF338	SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF54534	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf
InterPro:TPR_repeat	UniParc:UPI0001EF071D	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr16:-:11140559..11146012

Molecular Weight (calculated)

63805.7 Da

IEP (calculated)

4.945

GRAVY (calculated)

-0.614

Length

574 amino acids

Sequence
(BLAST)

001: MDEDFDMAAA EPMGEDFDFA GSGSNPVLKV GEEKEIGKEG LKKKLLKEGE GWDTPEAGDE VQVHYTGTLL DGTKFDSSRD RGTPFSFTLG QGQVIKGWDQ
101: GIITMKKGEN ALFTIPAELA YGESGSPPTI PPNATLQFDV ELLSWTSVKD ICKDGGLFKK ILTEGEKWEN PKDPDEVLVK YEAHLEDGTL VAKSDGVEFT
201: VNDGHFCPAF SKAVKTMKKG EKVLLTVKPQ YGFGEKGKPA HGDEGAVPPN ATLQITLELV SWKTVSEVTD DKKVIKKILK EGEGYEHPNE GAIVKLKVIG
301: KLQDGTLFLK KGHDDEGGLF EFKTDEEQVI DGLDRAVLTM KKGEVALLTI APEYAFGSSE SQQELAVVPP NSTLYYEIEL VSFEKEKESW DMDTPEKIEA
401: AGKKKEEGNA LFKAGKYARA SKRYEKAVKF IEYDTAFSEE EKKSSKSLKV ACNLNNAACK LKLKDYKQAE KLCTKVLDLE STNVKALYRR TQAYIQLADL
501: DLAEFDIKKA LELEPNNRDV KLEYVTLKEK MKEYNKKEAK FYGNMFNKLH KLDSLDNSKP ASKDAQPINI DSKS

Best Arabidopsis Sequence Match ( AT3G25230.1 )
(BLAST)

001: MDANFEMPPV GGMNDDDDMD FGDGASFLKV GEEKEIQQGL KKKLLKEGEG YETPENGDEV EVHYTGTLLD GTKFDSSRDR ATPFKFTLGQ GQVIKGWDIG
101: IKTMKKGENA VFTIPAELAY GESGSPPTIP ANATLQFDVE LLKWDSVKDI CKDGGVFKKI LAVGEKWENP KDLDEVLVKF EAKLEDGTVV GKSDGVEFTV
201: KDGHFCPALT KAVKTMKKGE KVLLTVKPQY GFGEKGKPAS AGEGAVPPNA TLEINLELVS WKTVSEVTDD NKVVKKVLKE GDGYERPNEG AVVKVKLIGK
301: LQDGTVFLKK GHGENEEPFE FKTDEEQVVD GLDRAVMKMK KGEVALVTID PEYAFGSNES QQELAVVPPN STVTYEVDLL TFDKERESWD MNTEEKIEAA
401: SKKKEEGNSK FKGGKYSLAS KRYEKAVKFI EYDTSFSEEE KKQAKALKVA CNLNDAACKL KLKDYKQAEK LCTKVLELES TNVKALYRRA QAYMELSDLD
501: LAEFDVKKAL EIDPNNREVK LEQKRLKEKM KEFNKKEAKF YGNMFAKLSK E

Arabidopsis Description

ROF1Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:B3H746]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.