CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plasma membrane 1
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG95045	Soybean	cytosol	23.15	90.58
VIT_08s0040g00790.t01	Wine grape	cytosol	58.7	66.6
PGSC0003DMT400018490	Potato	cytosol	52.96	59.96
Solyc10g078250.1.1	Tomato	cytosol	9.81	58.24
KRH46622	Soybean	cytosol, nucleus	53.89	53.49
KRG99620	Soybean	cytosol	53.7	53.31
KRH07424	Soybean	cytosol	53.33	50.17
KRH66151	Soybean	nucleus	54.07	50.17
KRH58815	Soybean	peroxisome	52.41	49.65
Solyc10g078260.1.1	Tomato	cytosol	39.44	49.31
KRH42713	Soybean	cytosol	51.85	49.12
KRH21780	Soybean	cytosol, mitochondrion, plastid	8.7	41.96
KRG88759	Soybean	cytosol	38.33	35.57
KRH05556	Soybean	cytosol	37.59	34.82
KRH10589	Soybean	cytosol	8.7	33.57
KRG97894	Soybean	cytosol	9.63	27.66
KRH30990	Soybean	cytosol	9.44	27.13
KRH75755	Soybean	cytosol, endoplasmic reticulum	29.26	25.4
KRH62430	Soybean	cytosol	29.07	25.24
KRH39924	Soybean	endoplasmic reticulum	16.48	24.05
KRH23877	Soybean	cytosol, endoplasmic reticulum, nucleus	16.11	23.51

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100785412	MapMan:18.12.2	Gene3D:3.10.50.40	Gene3D:3.30.1670.20	EMBL:ACUP02002006
EnsemblPlantsGene:GLYMA_03G122100	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005528	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016853	GO:GO:0019538
GO:GO:0061077	InterPro:IPR001179	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	UniProt:K7KEL5
EnsemblPlants:KRH66687	ProteinID:KRH66687	ProteinID:KRH66687.1	ProteinID:KRH66688.1	PFAM:PF00254	PFAM:PF00515
InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom	PFscan:PS50005	PFscan:PS50059	PFscan:PS50293	PANTHER:PTHR10516
PANTHER:PTHR10516:SF312	SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF54534	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf
InterPro:TPR_1	InterPro:TPR_repeat	UniParc:UPI000295D2D3	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:-:33476187..33480739

Molecular Weight (calculated)

61085.9 Da

IEP (calculated)

5.245

GRAVY (calculated)

-0.543

Length

540 amino acids

Sequence
(BLAST)

001: MSMALSQLSH SLENELKGAE DSEFPLKEIG NEGLTKRILR KGVTWQTPFS GDEVEVHFNG QVENGASLES SYDKGSPFRF KLGQCEVIKG WDEGVATMKK
101: GERAIFKIPP NLAYGEEGSL PLIPPNATLI FDIEMLSWSS IRDLTGDGGV KKKIIREGEG WATPREADEV LVKYEARLEN GMLVSKSDQG VEFNVSDGYL
201: CPAMSIAVKT MRKGEVAELA MRFCYGLSQN SSRITELEGV LPPDSNLTSI KLELVSWKIV ADVTGDKKIL KKIKNLGEGF DRPNEGSQVK VIYLCKGEDG
301: TIIESKGSEE EPFEFTTQEE QVPEGLERAI MTMKKGEQAL VTVDAEYLCD YNNSKGNTAN NKVLYYEVEL VDFVKEKPFW KMDTQEKIEA CERKKHDGNL
401: LFKVENFRHA SKKYEKAVKY IEFDHSFSED EKCRANTLHL SCNLNNAACK LKLGEYIEAS RLCTKVLEQD PLNIKALYRR CQAYLKTSDL EKAEADIKRA
501: LIIDPNNRDI KLEYKELKLK QKEYSRHEAD IFSTMLSRMN

Best Arabidopsis Sequence Match ( AT3G25230.1 )
(BLAST)

001: MDANFEMPPV GGMNDDDDMD FGDGASFLKV GEEKEIQQGL KKKLLKEGEG YETPENGDEV EVHYTGTLLD GTKFDSSRDR ATPFKFTLGQ GQVIKGWDIG
101: IKTMKKGENA VFTIPAELAY GESGSPPTIP ANATLQFDVE LLKWDSVKDI CKDGGVFKKI LAVGEKWENP KDLDEVLVKF EAKLEDGTVV GKSDGVEFTV
201: KDGHFCPALT KAVKTMKKGE KVLLTVKPQY GFGEKGKPAS AGEGAVPPNA TLEINLELVS WKTVSEVTDD NKVVKKVLKE GDGYERPNEG AVVKVKLIGK
301: LQDGTVFLKK GHGENEEPFE FKTDEEQVVD GLDRAVMKMK KGEVALVTID PEYAFGSNES QQELAVVPPN STVTYEVDLL TFDKERESWD MNTEEKIEAA
401: SKKKEEGNSK FKGGKYSLAS KRYEKAVKFI EYDTSFSEEE KKQAKALKVA CNLNDAACKL KLKDYKQAEK LCTKVLELES TNVKALYRRA QAYMELSDLD
501: LAEFDVKKAL EIDPNNREVK LEQKRLKEKM KEFNKKEAKF YGNMFAKLSK E

Arabidopsis Description

ROF1Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:B3H746]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.