Factsheet for Solyc10g078260.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, vacuole
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG95045	Soybean	cytosol	16.2	50.72
VIT_08s0040g00790.t01	Wine grape	cytosol	49.54	44.96
Solyc01g105710.2.1	Tomato	extracellular	10.65	41.07
KRH66687	Soybean	cytosol	49.31	39.44
Solyc09g057660.2.1	Tomato	cytosol	43.98	34.11
Solyc09g092690.2.1	Tomato	cytosol	45.14	33.56
Solyc06g083190.2.1	Tomato	extracellular	43.75	32.93
Solyc04g011620.2.1	Tomato	nucleus	11.81	27.42
Solyc04g077660.2.1	Tomato	cytosol	34.49	25.51
Solyc11g011420.1.1	Tomato	cytosol, plastid	27.08	20.03
Solyc10g078250.1.1	Tomato	cytosol	3.47	16.48
Solyc01g087470.2.1	Tomato	cytosol	5.79	7.69

Protein Annotations

Gene3D:1.25.40.10	MapMan:18.12.2	Gene3D:3.10.50.40	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005528	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016853	GO:GO:0019538	GO:GO:0061077	InterPro:IPR001179
InterPro:IPR011990	UniProt:K4D268	PFAM:PF00254	InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom	PFscan:PS50059
PANTHER:PTHR10516	PANTHER:PTHR10516:SF312	SUPFAM:SSF54534	EnsemblPlantsGene:Solyc10g078260.1	EnsemblPlants:Solyc10g078260.1.1	TMHMM:TMhelix
InterPro:TPR-like_helical_dom_sf	UniParc:UPI000276A237	SEG:seg	:	:	:

Description

Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:K4D268]

Coordinates

chr10:-:60093643..60096639

Molecular Weight (calculated)

49089.3 Da

IEP (calculated)

7.220

GRAVY (calculated)

-0.322

Length

432 amino acids

Sequence
(BLAST)

001: MGDFNSKKSN KVNFETKIQD SQEIVIGKEG LRKKILQKGN SWKTPFHGDE IQVHYRVKLQ DGEFFDSSYD RGKTFTFKLG QGEVIKGWDE GIATMKKSER
101: AILTIPPNLA YGEIGSPPLI PPNSILIFEI ELISWNSIRD ISGDGGILKK IIKEGQGWAT PRDVDEVLVK YVASSADGKI LSQSDDAVEF SLMEGHLYPA
201: MKKSLKTMRK GEIVELIVKP PYYFGNSSFD GDGIGILQSS NSNLIIHLEL ISWKSVVDVI GDNKVLKKLI KAGEGYDHPN EGSLAKVVYI GKLLDGTIFE
301: RKGSHEEPFE YVCLEGQLNE YVDRAIMTMK KGEEAIVTIN SHSMFYEIKL VDFNKEKPFW KMETKEKIEA CDKIKNEGNV LFKDGKFQCA SRKYEKECNS
401: FSFLFFFYSV LHMSITICLS LKQFKERLMF FM

Best Arabidopsis Sequence Match ( AT5G48570.1 )
(BLAST)

001: MEDDFDTQNQ FPEEEPEEMD MDLPDNDEAD SAPYLKIGEE MEIGKSGLKK KLVKECEKWD TPENGDEVEV HYTGTLLDGT KFDSSRDRGT PFKFTLGQGH
101: VIKGWDLGIK TMKKGENAIF TIPPELAYGE TGSPPTIPPN ATLQFDVELI AWRSVKDICG DGGVSKKIIV EGEKWEKPKD LDEVYVKYEA RLEDGTIVGK
201: SDGVEFTVKE GHFCPALSKA VKTMKRGEKV LLTVKPQYGF GEFGRPASDG LQAAIPPNAT LQIDLELVSW KTVVEVTDDR KVIKKILKEG EGYERPNEGA
301: IVKLKLIGKL QDGTTVFVKK GHEEDEEPFE FKIDEEQVIE GLEKAVMGMK KGEVALITIS PEYAFGSSES KQELAVIPPN STVYYEVELV SFIKEKESWD
401: MNTQERIEAA GKKKEEGNVL FKAGKYARAS KRYERGVKYI EYDSTFDEEE KKKSKDLKIA CNLNDAACKL KLKDYKEAAK LSTKVLEMDS RNVKAMYRRA
501: HAYLETADLD LAELDIKKAL EIDPDNKEVK IEYKKLKEKV KEYNKKDAKF YSNMLSKMLE PHKGTQKEAQ AMSIDTKA

Arabidopsis Description

FKBP65Peptidyl-prolyl cis-trans isomerase FKBP65 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJL3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.