Factsheet for Solyc09g057660.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g083190.2.1	Tomato	extracellular	87.61	85.02
VIT_00s0260g00070.t01	Wine grape	cytosol	15.08	82.35
GSMUA_Achr7P22780_001	Banana	cytosol	77.56	78.69
CDY52281	Canola	cytosol	78.82	78.67
CDY15103	Canola	cytosol	78.64	78.49
KXG25560	Sorghum	cytosol	77.56	78.12
AT3G25230.2	Thale cress	cytosol	78.64	77.94
TraesCS7A01G257100.1	Wheat	cytosol	77.56	77.28
CDY15104	Canola	cytosol	38.42	77.26
Bra013224.1-P	Field mustard	cytosol	78.64	77.25
TraesCS7D01G257300.1	Wheat	cytosol	77.2	76.92
TraesCS7B01G153100.1	Wheat	golgi	77.02	76.74
GSMUA_Achr10P...	Banana	cytosol	77.02	76.33
CDX86295	Canola	cytosol	77.38	75.22
Bra037477.1-P	Field mustard	cytosol	77.2	75.04
HORVU7Hr1G053170.6	Barley	cytosol	76.12	74.91
Zm00001d031569_P001	Maize	plasma membrane	77.74	74.66
AT5G48570.1	Thale cress	cytosol	77.2	74.39
GSMUA_AchrUn_...	Banana	cytosol	77.56	74.35
CDX85348	Canola	cytosol	75.94	74.21
Os08t0525600-01	Rice	cytosol, extracellular, plasma membrane, plastid	75.94	72.93
Solyc09g092690.2.1	Tomato	cytosol	74.33	71.26
PGSC0003DMT400053619	Potato	cytosol	96.05	70.77
CDY00831	Canola	cytosol	20.29	59.47
Solyc04g077660.2.1	Tomato	cytosol	51.17	48.8
Solyc10g078250.1.1	Tomato	cytosol	7.54	46.15
Solyc10g078260.1.1	Tomato	cytosol	34.11	43.98
Solyc01g105710.2.1	Tomato	extracellular	8.62	42.86
CDY00829	Canola	cytosol	26.39	41.18
Solyc04g011620.2.1	Tomato	nucleus	12.03	36.02
Solyc11g011420.1.1	Tomato	cytosol, plastid	28.73	27.4
Solyc01g087470.2.1	Tomato	cytosol	13.82	23.69

Protein Annotations

Gene3D:1.25.40.10	MapMan:18.12.2	Gene3D:3.10.50.40	Gene3D:3.30.1670.20	ncoils:Coil	GO:GO:0000413
GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005528
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016853	GO:GO:0019538	GO:GO:0061077	InterPro:IPR001179
InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	UniProt:K4CTF7	PFAM:PF00254	PFAM:PF00515
InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom	PFscan:PS50005	PFscan:PS50059	PFscan:PS50293	PANTHER:PTHR10516
PANTHER:PTHR10516:SF338	SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF54534	EnsemblPlantsGene:Solyc09g057660.2	EnsemblPlants:Solyc09g057660.2.1
InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_1	InterPro:TPR_repeat	UniParc:UPI000276B36D	SEG:seg

Description

Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:K4CTF7]

Coordinates

chr9:-:50116368..50120559

Molecular Weight (calculated)

62068.1 Da

IEP (calculated)

4.931

GRAVY (calculated)

-0.599

Length

557 amino acids

Sequence
(BLAST)

001: MDDDFDIPGA EGMDDDMDLP DESPIMKVGD EKVIGKEGLK KKLVKEGEGW DTPEAGDEVE VHYTGTLLDG SKFDSSRDRG TPFKFTLGQG QVIKGWDQGI
101: KTMKKGENAI FTIPPELAYG ESGSPPTIPP NSTLQFDVEL LSWVSVKDIC KDGGIFKKIL TKGEKWENPK DLDEVLVKYE AQLEDGSLVG KSDGVEFTVQ
201: EGHFCPAIAK AVKTMKKGEK VQLTVKPQYG FGEKGKPASG DGGAVPPNAP LQISLELVTW KIVSSVTDDK KVIKKILKEG EGFEKPNEGA VVKMKLIGKL
301: QDGTVFIKKG HNGENEDELF EFMIDEEQVI DGLDRAAMSM KKGEVALLII APDYAFGLSE SKQDLGVVPP NSTVYYEVEL VSFVKEKESW DMNTQEKIEA
401: TGKKKEEGNA LFKAGKYARA SKRYEKAAKF IEYDTDFSEE EKKQAKALKI SCNLNDAACK LKLKDYKQAE KLCTKVLETE STNVKALYRR AQAYMNMADL
501: DLAEFDIKKA LEIDPNNRDV KLEYKALKEK VKEFNKKDAK FYGNMFAKLN KLDTNYM

Best Arabidopsis Sequence Match ( AT3G25230.1 )
(BLAST)

001: MDANFEMPPV GGMNDDDDMD FGDGASFLKV GEEKEIQQGL KKKLLKEGEG YETPENGDEV EVHYTGTLLD GTKFDSSRDR ATPFKFTLGQ GQVIKGWDIG
101: IKTMKKGENA VFTIPAELAY GESGSPPTIP ANATLQFDVE LLKWDSVKDI CKDGGVFKKI LAVGEKWENP KDLDEVLVKF EAKLEDGTVV GKSDGVEFTV
201: KDGHFCPALT KAVKTMKKGE KVLLTVKPQY GFGEKGKPAS AGEGAVPPNA TLEINLELVS WKTVSEVTDD NKVVKKVLKE GDGYERPNEG AVVKVKLIGK
301: LQDGTVFLKK GHGENEEPFE FKTDEEQVVD GLDRAVMKMK KGEVALVTID PEYAFGSNES QQELAVVPPN STVTYEVDLL TFDKERESWD MNTEEKIEAA
401: SKKKEEGNSK FKGGKYSLAS KRYEKAVKFI EYDTSFSEEE KKQAKALKVA CNLNDAACKL KLKDYKQAEK LCTKVLELES TNVKALYRRA QAYMELSDLD
501: LAEFDVKKAL EIDPNNREVK LEQKRLKEKM KEFNKKEAKF YGNMFAKLSK E

Arabidopsis Description

ROF1Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:B3H746]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.