Factsheet for Bra013224.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plasma membrane 1
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G25230.2	Thale cress	cytosol	88.18	88.97
KXG25560	Sorghum	cytosol	77.25	79.2
Solyc09g057660.2.1	Tomato	cytosol	77.25	78.64
GSMUA_Achr7P22780_001	Banana	cytosol	75.31	77.78
Solyc06g083190.2.1	Tomato	extracellular	78.66	77.7
PGSC0003DMT400051809	Potato	cytosol	78.66	77.7
TraesCS7D01G257300.1	Wheat	cytosol	74.07	75.13
TraesCS7A01G257100.1	Wheat	cytosol	74.07	75.13
Bra037477.1-P	Field mustard	cytosol	75.84	75.04
Zm00001d031569_P001	Maize	plasma membrane	76.72	75.0
Os08t0525600-01	Rice	cytosol, extracellular, plasma membrane, plastid	76.72	75.0
TraesCS7B01G153100.1	Wheat	golgi	73.9	74.96
GSMUA_Achr10P...	Banana	cytosol	73.9	74.56
HORVU7Hr1G053170.6	Barley	cytosol	73.9	74.03
GSMUA_AchrUn_...	Banana	cytosol	75.66	73.84
VIT_00s0260g00070.t01	Wine grape	cytosol	12.87	71.57
CDY00831	Canola	cytosol	22.75	67.89
PGSC0003DMT400053619	Potato	cytosol	76.9	57.67
Bra024287.1-P	Field mustard	cytosol, mitochondrion, plastid	7.58	38.39
Bra037775.1-P	Field mustard	cytosol, mitochondrion, plastid	7.41	37.5
Bra007173.1-P	Field mustard	nucleus	11.46	34.21
Bra006895.1-P	Field mustard	cytosol	17.28	26.85
Bra012823.1-P	Field mustard	cytosol	16.4	26.05
Bra014849.1-P	Field mustard	cytosol	29.1	25.7
Bra003166.1-P	Field mustard	cytosol	28.75	25.23

Protein Annotations

Gene3D:1.25.40.10	MapMan:18.12.2	Gene3D:3.10.50.40	Gene3D:3.30.1670.20	EnsemblPlantsGene:Bra013224	EnsemblPlants:Bra013224.1
EnsemblPlants:Bra013224.1-P	ncoils:Coil	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0005829	GO:GO:0006464	GO:GO:0006950	GO:GO:0006970	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0008289	GO:GO:0009408	GO:GO:0009611	GO:GO:0009628
GO:GO:0009719	GO:GO:0009735	GO:GO:0009791	GO:GO:0009845	GO:GO:0009987	GO:GO:0016853
GO:GO:0019538	GO:GO:0032266	GO:GO:0046686	GO:GO:0071944	GO:GO:0080025	InterPro:IPR001179
InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	UniProt:M4D9R4	PFAM:PF00254	PFAM:PF00515
InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom	PFscan:PS50005	PFscan:PS50059	PFscan:PS50293	PANTHER:PTHR10516
PANTHER:PTHR10516:SF386	SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF54534	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf
InterPro:TPR_1	InterPro:TPR_repeat	UniParc:UPI000254088C	SEG:seg	:	:

Description

AT3G25230 (E=9e-269) ROF1, ATFKBP62, FKBP62 | ROF1 (ROTAMASE FKBP 1); FK506 binding / calmodulin binding / peptidyl-prolyl cis-trans isomerase

Coordinates

chrA03:+:19772885..19776068

Molecular Weight (calculated)

62973.9 Da

IEP (calculated)

4.788

GRAVY (calculated)

-0.589

Length

567 amino acids

Sequence
(BLAST)

001: MDEDFEMPPV GGMNGDDEMD FGDDASFLKV GEEKEIQQGL KKKLLKEGQG FETPENGDEV EVHYTGTLLD GTKFDSSLDR GTPFKFTLGQ GQVIKGWDIG
101: IKTMKKGENA VFTIPSELAY GESGSPPTIP ANATLQFDVE LLSWSSVKDI CKDGGVFKKI VAAGEKWEMP KDLDEVLVKY VAKLEDGTVV GKSDGVEFTV
201: KDGYFCPALA KAVKTMKKAE KVLLTVKPQY GFGEKGKPAS GGEAAVPPNA TLEIELELVS WKTVSEVTDD NKVIKKILKE GEGYERPNEG AVVKVKLIGK
301: LGDGTVFLKK GHGDGEEPFE FKTDEEQVID GLDKALLKMK KGEVALVTID PEYAFGSTES KQELAVVPPN STLYYEVDLV SFDKERESWD MNTEEKIEAA
401: GKKKEEGNAK FKAGKYALAS KRYEKAVKYI EYDSSFSEEE KKQAKALKVA CNLNDAACKL KLKEYRQAEK LCTKVLELES TNVKALYRRA QAYMELADLD
501: LAEFDVKKAL EVDPDNREVK VEQRRLKEKM KEFNKKEAKF YGNMFAKLSD GSTSTKRPTL IDVTNEE

Best Arabidopsis Sequence Match ( AT3G25230.1 )
(BLAST)

001: MDANFEMPPV GGMNDDDDMD FGDGASFLKV GEEKEIQQGL KKKLLKEGEG YETPENGDEV EVHYTGTLLD GTKFDSSRDR ATPFKFTLGQ GQVIKGWDIG
101: IKTMKKGENA VFTIPAELAY GESGSPPTIP ANATLQFDVE LLKWDSVKDI CKDGGVFKKI LAVGEKWENP KDLDEVLVKF EAKLEDGTVV GKSDGVEFTV
201: KDGHFCPALT KAVKTMKKGE KVLLTVKPQY GFGEKGKPAS AGEGAVPPNA TLEINLELVS WKTVSEVTDD NKVVKKVLKE GDGYERPNEG AVVKVKLIGK
301: LQDGTVFLKK GHGENEEPFE FKTDEEQVVD GLDRAVMKMK KGEVALVTID PEYAFGSNES QQELAVVPPN STVTYEVDLL TFDKERESWD MNTEEKIEAA
401: SKKKEEGNSK FKGGKYSLAS KRYEKAVKFI EYDTSFSEEE KKQAKALKVA CNLNDAACKL KLKDYKQAEK LCTKVLELES TNVKALYRRA QAYMELSDLD
501: LAEFDVKKAL EIDPNNREVK LEQKRLKEKM KEFNKKEAKF YGNMFAKLSK E

Arabidopsis Description

ROF1Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:B3H746]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.