Factsheet for HORVU7Hr1G048110.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
TargetP:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU6Hr1G064940.1
HORVU6Hr1G072940.1
HORVU6Hr1G077340.1
HORVU7Hr1G017790.1
HORVU7Hr1G048110.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G54170.1	HORVU7Hr1G017790.1	AT1G19830.1	21798944
AT3G54170.1	HORVU6Hr1G072940.1	AT1G54770.1	21798944
AT3G54170.1	HORVU7Hr1G048110.2	AT3G54170.1	21798944
AT3G54170.1	HORVU6Hr1G064940.1	AT4G10760.1	18505803
AT3G54170.1	HORVU6Hr1G077340.1	AT5G64350.1	9807817

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G234600.1	Wheat	nucleus	76.21	98.3
TraesCS7D01G234600.1	Wheat	nucleus	75.55	97.44
TraesCS7B01G132800.1	Wheat	nucleus	75.77	96.9
Os06t0474200-01	Rice	nucleus	65.86	84.94
GSMUA_Achr6P08880_001	Banana	nucleus	56.17	72.24
VIT_17s0000g08940.t01	Wine grape	nucleus	52.64	69.48
EES04471	Sorghum	nucleus	56.17	69.11
Zm00001d015194_P001	Maize	nucleus	54.85	67.3
PGSC0003DMT400046635	Potato	nucleus	48.9	64.91
Solyc03g112520.2.1	Tomato	nucleus	48.68	64.62
KRH57111	Soybean	nucleus	48.24	64.6
KRH03247	Soybean	nucleus	48.24	63.85
KRH54345	Soybean	nucleus	47.58	62.97
CDX73501	Canola	nucleus	44.71	62.85
AT3G54170.1	Thale cress	nucleus	45.37	62.42
CDX78214	Canola	nucleus	44.05	61.73
CDX67592	Canola	nucleus	46.26	61.05
KRH63594	Soybean	nucleus	47.36	60.73
CDY07554	Canola	nucleus	45.37	59.71
Bra007052.1-P	Field mustard	endoplasmic reticulum	43.83	57.18
Bra003174.1-P	Field mustard	endoplasmic reticulum, nucleus	33.26	50.84
CDX67590	Canola	nucleus	19.38	39.29
Bra003173.1-P	Field mustard	nucleus	18.94	38.56
CDY51583	Canola	nucleus	18.5	37.17

Protein Annotations

MapMan:16.5.1.1.3	UniProt:A0A287WEB7	ncoils:Coil	GO:GO:0000381	GO:GO:0001510	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009506	GO:GO:0009987	GO:GO:0010073
GO:GO:0043621	GO:GO:0080009	EnsemblPlantsGene:HORVU7Hr1G048110	EnsemblPlants:HORVU7Hr1G048110.2	PFAM:PF17098	PANTHER:PTHR15217
UniParc:UPI000B460895	InterPro:WTAP	InterPro:WTAP/Mum2	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr7H:+:163999981..164007084

Molecular Weight (calculated)

50343.5 Da

IEP (calculated)

8.226

GRAVY (calculated)

-0.858

Length

454 amino acids

Sequence
(BLAST)

001: LCLKRPWKHK IRTREQAVAQ PVKQKRPWRS PSKKRGRGAV SCLVAARSPK RPTNRAPSPH RSHPAGEAPN PRRRSTTSSA AGPAAHPARV SAVCTTAAKA
101: MADPPSPRLD EDDTFGRDFN ASPSRNAAPV RSGEKRQFGD LDDDEDDVFA SKKGKTKVEE SAPGAATGMI LSLRENLQTC KENLESNQVE LEAAKSEIQK
201: WHSAFENIPX XPAGTNPEPV SVVTYLNNLK SSEESLKEQL EKAKKREAAF IVTFAKREQE IAELKLQSAV RDLKTQLRPP SMQTRRLLLD PAIHEEFTRL
301: KNLAEEKEKK IKELQENVAA VNFTPSSKHG KMLMAKCRTL QEENEEIGAM ASEGKIHELG MKIAVLKTQN NELRNQFDGL YKHMDGLTND VERSNEMVSI
401: LQEELEAKDV ELARLKEMLS QKEATEDDAV VEEREEAAND MNAPSDPQPI KAES

Best Arabidopsis Sequence Match ( AT3G54170.1 )
(BLAST)

001: MEFSSQDDDF GGDDSAANAT RASGNRRSFG DLEDDEDDIF GSTTVAPGVR TGMILSLRGS LKNCKDDLAS CQNELESAKT EIQKWKSAFQ NESFVPAGKS
101: PEPRFLIDYI QNLKSSEKSL KEQLEIAKRK EASCIVQYAK REQEMAELKS AVRDLKSQLK PASMQARRLL LDPAIHEEFS RLKNLVEEKD KKIKELQDNI
201: AAVTFTPQSK NGKMLMAKCR TLQEENEEIG HQAAEGKIHE LAIKLAMQKS QNAELRSQFE GLYKHMEELT NDVERSNETV IILQEKLEEK EKEIERVKKG
301: LEIVSELVGD KKDEVDEIDE DAKEEIAGGE

Arabidopsis Description

FIP37FIP37 [Source:UniProtKB/TrEMBL;Acc:A0A178V9T4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.