Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX73501 | Canola | nucleus | 78.18 | 79.88 |
| CDX67592 | Canola | nucleus | 82.42 | 79.07 |
| CDX78214 | Canola | nucleus | 77.58 | 79.01 |
| CDY07554 | Canola | nucleus | 81.82 | 78.26 |
| Bra007052.1-P | Field mustard | endoplasmic reticulum | 76.67 | 72.7 |
| Bra003174.1-P | Field mustard | endoplasmic reticulum, nucleus | 61.52 | 68.35 |
| VIT_17s0000g08940.t01 | Wine grape | nucleus | 68.79 | 65.99 |
| KRH57111 | Soybean | nucleus | 65.76 | 64.01 |
| PGSC0003DMT400046635 | Potato | nucleus | 65.76 | 63.45 |
| KRH03247 | Soybean | nucleus | 65.76 | 63.27 |
| Solyc03g112520.2.1 | Tomato | nucleus | 63.94 | 61.7 |
| TraesCS7A01G234600.1 | Wheat | nucleus | 63.33 | 59.38 |
| TraesCS7D01G234600.1 | Wheat | nucleus | 63.33 | 59.38 |
| KRH54345 | Soybean | nucleus | 61.52 | 59.18 |
| TraesCS7B01G132800.1 | Wheat | nucleus | 63.64 | 59.15 |
| KRH63594 | Soybean | nucleus | 62.73 | 58.47 |
| Os06t0474200-01 | Rice | nucleus | 62.12 | 58.24 |
| GSMUA_Achr6P08880_001 | Banana | nucleus | 62.12 | 58.07 |
| Zm00001d015194_P001 | Maize | nucleus | 57.27 | 51.08 |
| EES04471 | Sorghum | nucleus | 56.67 | 50.68 |
| HORVU7Hr1G048110.2 | Barley | plastid | 62.42 | 45.37 |
| CDX67590 | Canola | nucleus | 30.61 | 45.09 |
| Bra003173.1-P | Field mustard | nucleus | 30.0 | 44.39 |
| CDY51583 | Canola | nucleus | 29.39 | 42.92 |
Protein Annotations
| MapMan:16.5.1.1.3 | EntrezGene:824584 | UniProt:A0A178V9T4 | ProteinID:AEE79195.1 | EMBL:AF084570 | ArrayExpress:AT3G54170 |
| EnsemblPlantsGene:AT3G54170 | RefSeq:AT3G54170 | TAIR:AT3G54170 | RefSeq:AT3G54170-TAIR-G | EnsemblPlants:AT3G54170.1 | TAIR:AT3G54170.1 |
| Symbol:ATFIP37 | EMBL:AY063940 | EMBL:AY113943 | Unigene:At.930 | ProteinID:CAB70991.1 | ncoils:Coil |
| GO:GO:0000381 | GO:GO:0001510 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 | GO:GO:0006139 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009506 | GO:GO:0009987 | GO:GO:0010073 | GO:GO:0016607 | GO:GO:0043621 |
| GO:GO:0080009 | RefSeq:NP_190985.1 | ProteinID:OAP02666.1 | PFAM:PF17098 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PANTHER:PTHR15217 | UniProt:Q9ZSZ8 | UniParc:UPI00000A0E82 | InterPro:WTAP | InterPro:WTAP/Mum2 |
| SEG:seg | : | : | : | : | : |
Description
FIP37FIP37 [Source:UniProtKB/TrEMBL;Acc:A0A178V9T4]
Coordinates
chr3:+:20056664..20059583
Molecular Weight (calculated)
37216.8 Da
IEP (calculated)
4.635
GRAVY (calculated)
-0.806
Length
330 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFSSQDDDF GGDDSAANAT RASGNRRSFG DLEDDEDDIF GSTTVAPGVR TGMILSLRGS LKNCKDDLAS CQNELESAKT EIQKWKSAFQ NESFVPAGKS
101: PEPRFLIDYI QNLKSSEKSL KEQLEIAKRK EASCIVQYAK REQEMAELKS AVRDLKSQLK PASMQARRLL LDPAIHEEFS RLKNLVEEKD KKIKELQDNI
201: AAVTFTPQSK NGKMLMAKCR TLQEENEEIG HQAAEGKIHE LAIKLAMQKS QNAELRSQFE GLYKHMEELT NDVERSNETV IILQEKLEEK EKEIERVKKG
301: LEIVSELVGD KKDEVDEIDE DAKEEIAGGE
101: PEPRFLIDYI QNLKSSEKSL KEQLEIAKRK EASCIVQYAK REQEMAELKS AVRDLKSQLK PASMQARRLL LDPAIHEEFS RLKNLVEEKD KKIKELQDNI
201: AAVTFTPQSK NGKMLMAKCR TLQEENEEIG HQAAEGKIHE LAIKLAMQKS QNAELRSQFE GLYKHMEELT NDVERSNETV IILQEKLEEK EKEIERVKKG
301: LEIVSELVGD KKDEVDEIDE DAKEEIAGGE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.