Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES04471 | Sorghum | nucleus | 77.84 | 78.05 |
| TraesCS7D01G234600.1 | Wheat | nucleus | 68.38 | 71.88 |
| TraesCS7A01G234600.1 | Wheat | nucleus | 68.38 | 71.88 |
| Os06t0474200-01 | Rice | nucleus | 67.84 | 71.31 |
| TraesCS7B01G132800.1 | Wheat | nucleus | 68.38 | 71.27 |
| GSMUA_Achr6P08880_001 | Banana | nucleus | 61.62 | 64.59 |
| VIT_17s0000g08940.t01 | Wine grape | nucleus | 58.11 | 62.5 |
| KRH57111 | Soybean | nucleus | 54.59 | 59.59 |
| KRH03247 | Soybean | nucleus | 54.59 | 58.89 |
| PGSC0003DMT400046635 | Potato | nucleus | 53.24 | 57.6 |
| Solyc03g112520.2.1 | Tomato | nucleus | 52.97 | 57.31 |
| CDX73501 | Canola | nucleus | 50.0 | 57.28 |
| AT3G54170.1 | Thale cress | nucleus | 51.08 | 57.27 |
| CDX78214 | Canola | nucleus | 49.73 | 56.79 |
| CDX67592 | Canola | nucleus | 51.35 | 55.23 |
| KRH54345 | Soybean | nucleus | 51.08 | 55.1 |
| HORVU7Hr1G048110.2 | Barley | plastid | 67.3 | 54.85 |
| KRH63594 | Soybean | nucleus | 52.43 | 54.8 |
| CDY07554 | Canola | nucleus | 49.73 | 53.33 |
| Bra007052.1-P | Field mustard | endoplasmic reticulum | 50.0 | 53.16 |
| Bra003174.1-P | Field mustard | endoplasmic reticulum, nucleus | 40.0 | 49.83 |
| CDX67590 | Canola | nucleus | 21.62 | 35.71 |
| Bra003173.1-P | Field mustard | nucleus | 21.08 | 34.98 |
| CDY51583 | Canola | nucleus | 20.54 | 33.63 |
Protein Annotations
| EntrezGene:100193941 | MapMan:16.5.1.1.3 | ProteinID:AQK68251.1 | UniProt:B4FGU4 | EMBL:BT036332 | ncoils:Coil |
| GO:GO:0000381 | GO:GO:0001510 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009506 | GO:GO:0009987 | GO:GO:0010073 | GO:GO:0043621 | GO:GO:0080009 | PFAM:PF17098 |
| PANTHER:PTHR15217 | UniParc:UPI00017B705F | InterPro:WTAP | InterPro:WTAP/Mum2 | EnsemblPlantsGene:Zm00001d015194 | EnsemblPlants:Zm00001d015194_P001 |
| EnsemblPlants:Zm00001d015194_T001 | SEG:seg | : | : | : | : |
Description
FKBP12-interacting protein of 37 kDa
Coordinates
chr5:+:78914630..78921774
Molecular Weight (calculated)
40818.0 Da
IEP (calculated)
4.604
GRAVY (calculated)
-0.712
Length
370 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSPWSPMSL EEEEEIQELD AEEQQDGEQP QQGDGLQQGS TAEARAQQTG KKRARSVANS STKSEAKIKV EESAPGAATG VILSLRESLQ DCKQSLASCQ
101: VELEAAKSEI EKWHSAFQSI PAVPSGTSPD PVSVVSYLSN LKSSEESLKE QLEKAKKREA AFIVTFAKRE QEIAELKSAV RDLKTQLRPP SMQTRRLLLD
201: PAIHEEFTRL KNLVEEKEKK IKELQDNVAA VNFTPSSKLG KMLMAKCRTL QEENEEIGAM ASEGKIHELG MKIAVLKSQN NELRNQFDVL YKHMDGVTND
301: VERSNELVAI LQEELEAKEL EVTRLKEETL SQKEGTQEAP APAPAPVEEG DGAGNDLKPA SDPLQVKLES
101: VELEAAKSEI EKWHSAFQSI PAVPSGTSPD PVSVVSYLSN LKSSEESLKE QLEKAKKREA AFIVTFAKRE QEIAELKSAV RDLKTQLRPP SMQTRRLLLD
201: PAIHEEFTRL KNLVEEKEKK IKELQDNVAA VNFTPSSKLG KMLMAKCRTL QEENEEIGAM ASEGKIHELG MKIAVLKSQN NELRNQFDVL YKHMDGVTND
301: VERSNELVAI LQEELEAKEL EVTRLKEETL SQKEGTQEAP APAPAPVEEG DGAGNDLKPA SDPLQVKLES
001: MEFSSQDDDF GGDDSAANAT RASGNRRSFG DLEDDEDDIF GSTTVAPGVR TGMILSLRGS LKNCKDDLAS CQNELESAKT EIQKWKSAFQ NESFVPAGKS
101: PEPRFLIDYI QNLKSSEKSL KEQLEIAKRK EASCIVQYAK REQEMAELKS AVRDLKSQLK PASMQARRLL LDPAIHEEFS RLKNLVEEKD KKIKELQDNI
201: AAVTFTPQSK NGKMLMAKCR TLQEENEEIG HQAAEGKIHE LAIKLAMQKS QNAELRSQFE GLYKHMEELT NDVERSNETV IILQEKLEEK EKEIERVKKG
301: LEIVSELVGD KKDEVDEIDE DAKEEIAGGE
101: PEPRFLIDYI QNLKSSEKSL KEQLEIAKRK EASCIVQYAK REQEMAELKS AVRDLKSQLK PASMQARRLL LDPAIHEEFS RLKNLVEEKD KKIKELQDNI
201: AAVTFTPQSK NGKMLMAKCR TLQEENEEIG HQAAEGKIHE LAIKLAMQKS QNAELRSQFE GLYKHMEELT NDVERSNETV IILQEKLEEK EKEIERVKKG
301: LEIVSELVGD KKDEVDEIDE DAKEEIAGGE
Arabidopsis Description
FIP37FIP37 [Source:UniProtKB/TrEMBL;Acc:A0A178V9T4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.