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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d008420_P001 Maize cytosol 77.82 94.04
Zm00001d053311_P001 Maize nucleus 73.59 61.11
Zm00001d027753_P001 Maize nucleus 87.32 58.63
Zm00001d051802_P001 Maize mitochondrion 22.18 54.78
Zm00001d045423_P001 Maize cytosol 23.24 52.8
Os06t0137400-00 Rice mitochondrion 21.83 52.1
KXG19242 Sorghum mitochondrion 22.89 51.18
Zm00001d033729_P001 Maize nucleus 64.08 49.73
Zm00001d004578_P001 Maize plastid 21.13 48.39
TraesCS4A01G375500.1 Wheat mitochondrion 19.37 46.22
TraesCS7A01G077000.1 Wheat mitochondrion 19.37 45.83
GSMUA_Achr5P11350_001 Banana mitochondrion 15.49 44.9
GSMUA_Achr11P... Banana mitochondrion 16.2 44.66
GSMUA_Achr1P02500_001 Banana mitochondrion 15.49 44.44
TraesCS7D01G072600.1 Wheat mitochondrion 19.01 43.2
GSMUA_Achr1P19860_001 Banana mitochondrion 15.85 42.45
VIT_18s0001g13980.t01 Wine grape mitochondrion 15.49 42.31
Bra008207.1-P Field mustard cytosol, mitochondrion 14.08 42.11
Zm00001d012222_P001 Maize cytosol 22.18 42.0
GSMUA_Achr7P06520_001 Banana mitochondrion 15.14 41.75
Solyc01g110580.2.1 Tomato mitochondrion 14.08 41.67
PGSC0003DMT400004186 Potato mitochondrion 14.08 41.67
PGSC0003DMT400004089 Potato cytosol 14.79 41.58
GSMUA_Achr3P11290_001 Banana mitochondrion 14.79 41.18
Zm00001d051962_P001 Maize cytosol 22.89 40.62
KRH51448 Soybean cytosol 15.14 40.57
KRH60748 Soybean cytosol 15.14 40.57
GSMUA_Achr1P06110_001 Banana mitochondrion 14.08 40.4
VIT_03s0038g00950.t01 Wine grape mitochondrion 14.79 40.38
KRH24349 Soybean mitochondrion 14.79 40.0
KRH51719 Soybean mitochondrion 14.08 40.0
KRH61056 Soybean mitochondrion 14.08 40.0
Solyc01g110590.2.1 Tomato mitochondrion 14.79 40.0
PGSC0003DMT400004090 Potato mitochondrion 14.79 40.0
CDX68122 Canola mitochondrion 15.14 39.81
CDX85905 Canola mitochondrion 15.14 39.81
Bra003746.1-P Field mustard mitochondrion 15.14 39.81
PGSC0003DMT400004187 Potato mitochondrion 14.44 39.05
Solyc01g110570.2.1 Tomato mitochondrion 14.44 39.05
CDY13560 Canola mitochondrion 14.79 38.89
Solyc01g110620.1.1 Tomato mitochondrion 14.08 38.1
AT1G75580.1 Thale cress mitochondrion 14.44 37.96
CDY39041 Canola mitochondrion 14.44 37.96
Solyc04g081270.1.1 Tomato mitochondrion 14.44 37.96
PGSC0003DMT400004167 Potato mitochondrion 14.44 37.96
PGSC0003DMT400009665 Potato mitochondrion 14.44 37.96
PGSC0003DMT400004165 Potato mitochondrion 14.08 37.74
Solyc10g054720.1.1 Tomato mitochondrion 14.44 37.61
KRH39815 Soybean mitochondrion 13.73 37.5
CDY47511 Canola mitochondrion 14.08 37.04
CDX73181 Canola mitochondrion 14.08 37.04
Bra015832.1-P Field mustard mitochondrion 14.08 37.04
Solyc01g110610.2.1 Tomato cytosol, mitochondrion, nucleus 14.08 37.04
PGSC0003DMT400068694 Potato mitochondrion 14.08 36.7
AT1G19830.1 Thale cress mitochondrion 14.79 35.9
PGSC0003DMT400087067 Potato mitochondrion 13.73 35.45
CDY29398 Canola cytosol, mitochondrion 14.08 35.4
CDY44482 Canola mitochondrion 14.08 35.4
CDY55152 Canola cytosol, mitochondrion 14.08 35.4
Bra025770.1-P Field mustard cytosol, mitochondrion 14.08 35.4
HORVU7Hr1G017790.1 Barley extracellular, mitochondrion, plastid 19.37 30.56
Zm00001d003018_P001 Maize mitochondrion 12.32 27.56
Protein Annotations
EnsemblPlants:Zm00001d021237_P001EnsemblPlants:Zm00001d021237_T001EnsemblPlantsGene:Zm00001d021237GO:GO:0003674GO:GO:0005488GO:GO:0005515
GO:GO:0008150GO:GO:0009719GO:GO:0009733GO:GO:0046983InterPro:IPR011598InterPro:SAUR_fam
InterPro:bHLH_domPANTHER:PTHR31374PANTHER:PTHR31374:SF35PFAM:PF02519PFscan:PS50888ProteinID:ONM56592.1
SEG:segUniParc:UPI000842A9EDUniProt:A0A1D6I988MapMan:15.5.32::
Description
SAUR-like auxin-responsive protein family
Coordinates
chr7:+:146666554..146668407
Molecular Weight (calculated)
31017.0 Da
IEP (calculated)
5.544
GRAVY (calculated)
-0.555
Length
284 amino acids
Sequence
(BLAST)
001: MRLPSDVPRD HFAVYVGEWW RRFVVPIALL DRPEFRSLLR CAEEEFGFAG AGGALVLPYE EVAFHSLTFA LACARPDDDL VELLWHNGSV VAQPQAHHRP
101: AQPSDRDRPG TSGLTAEETA AWFLNTLDDP LEKDLYTQLW YNTIADAALQ HEGTFPGPTS HPSSPPPPVG SSGVESSWVG DFCSTFCDSN QVPRTPTGIR
201: GKDAALQSEV PSDAGAHDGT SSSGGSGSNY GGSGLPSDSV HGHKRKGMCR DESDSRSERR RDRIKEKMRA LQELIPHCNK VQVP
Best Arabidopsis Sequence Match ( AT4G38860.1 )
(BLAST)
001: MAVKRSSKLT QTAMLKQILK RCSSLGKKQC YDEEGLPLDV PKGHFPVYVG EKRTRYIVPI SFLTHPEFLI LLQQAEEEFG FRHDMGGLTI PCEEVVFLSL
101: TSMIR
Arabidopsis Description
At4g38860 [Source:UniProtKB/TrEMBL;Acc:Q9T0J3]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.