Factsheet for PGSC0003DMT400068694

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g054720.1.1	Tomato	mitochondrion	95.41	95.41
PGSC0003DMT400004089	Potato	cytosol	80.73	87.13
VIT_03s0038g00950.t01	Wine grape	mitochondrion	82.57	86.54
PGSC0003DMT400004187	Potato	mitochondrion	82.57	85.71
PGSC0003DMT400004090	Potato	mitochondrion	78.9	81.9
PGSC0003DMT400004167	Potato	mitochondrion	80.73	81.48
PGSC0003DMT400004165	Potato	mitochondrion	77.98	80.19
PGSC0003DMT400004186	Potato	mitochondrion	68.81	78.12
KRH39815	Soybean	mitochondrion	74.31	77.88
PGSC0003DMT400009665	Potato	mitochondrion	77.06	77.78
KRH51448	Soybean	cytosol	75.23	77.36
KRH60748	Soybean	cytosol	75.23	77.36
KRH24349	Soybean	mitochondrion	74.31	77.14
GSMUA_Achr1P02500_001	Banana	mitochondrion	69.72	76.77
GSMUA_Achr5P11350_001	Banana	mitochondrion	68.81	76.53
GSMUA_Achr11P...	Banana	mitochondrion	69.72	73.79
PGSC0003DMT400087067	Potato	mitochondrion	73.39	72.73
PGSC0003DMT400058186	Potato	cytosol	65.14	71.0
PGSC0003DMT400075050	Potato	cytosol	62.39	70.83
GSMUA_Achr3P11290_001	Banana	mitochondrion	62.39	66.67
PGSC0003DMT400009439	Potato	mitochondrion	61.47	66.34
GSMUA_Achr7P06520_001	Banana	mitochondrion	60.55	64.08
GSMUA_Achr1P06110_001	Banana	mitochondrion	57.8	63.64
GSMUA_Achr1P19860_001	Banana	mitochondrion	60.55	62.26
Os02t0445600-01	Rice	cytosol, mitochondrion	53.21	59.79
Os02t0445100-01	Rice	mitochondrion	47.71	54.17
Zm00001d051802_P001	Maize	mitochondrion	54.13	51.3
Os06t0137400-00	Rice	mitochondrion	55.96	51.26
KXG19242	Sorghum	mitochondrion	57.8	49.61
Zm00001d045423_P001	Maize	cytosol	55.96	48.8
TraesCS4A01G375500.1	Wheat	mitochondrion	53.21	48.74
TraesCS7A01G077000.1	Wheat	mitochondrion	53.21	48.33
TraesCS7D01G072600.1	Wheat	mitochondrion	53.21	46.4
Zm00001d004578_P001	Maize	plastid	45.87	40.32
Zm00001d012222_P001	Maize	cytosol	47.71	34.67
PGSC0003DMT400067154	Potato	cytosol	33.03	34.29
Zm00001d051962_P001	Maize	cytosol	49.54	33.75
HORVU7Hr1G017790.1	Barley	extracellular, mitochondrion, plastid	52.29	31.67
PGSC0003DMT400055533	Potato	cytosol	31.19	28.1
PGSC0003DMT400080544	Potato	cytosol	30.28	27.05
Zm00001d008420_P001	Maize	cytosol	37.61	17.45
Zm00001d021237_P001	Maize	cytosol	36.7	14.08
Zm00001d033729_P001	Maize	nucleus	44.95	13.39
Zm00001d027753_P001	Maize	nucleus	37.61	9.69
Zm00001d053311_P001	Maize	nucleus	21.1	6.73

Protein Annotations

EnsemblPlants:PGSC0003DMT400068694	EnsemblPlantsGene:PGSC0003DMG400026709	EntrezGene:102590858	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF2	PFAM:PF02519	PGSC:PGSC0003DMG400026709	RefSeq:XP_006365926.1
UniParc:UPI000294FE8E	UniProt:M1CJD2	MapMan:35.1	:	:	:

Description

SAUR family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400026709]

Coordinates

chr10:-:46163894..46164411

Molecular Weight (calculated)

12391.8 Da

IEP (calculated)

6.241

GRAVY (calculated)

-0.336

Length

109 amino acids

Sequence
(BLAST)

001: MAIRKSNKLS QSAMLKQILK RCSSLGKKNN SYDDDENSLP IDVPKGHFAV YVGENRTRYI VPISFLSYPE FQCLLHRAEE EFGFDHDMGI TIPCEEIVFQ
101: SLTSSMLGN

Best Arabidopsis Sequence Match ( AT1G75580.1 )
(BLAST)

001: MAMKKANKLT QTAMIKQILK RCSSLGKKQS NVYGEDENGS PLNVPKGHFV VYVGENRVRY VVPISFLTRP EFQLLLQQAE EEFGFDHDMG LTIPCEEVVF
101: RSLTSMLR

Arabidopsis Description

At1g75580 [Source:UniProtKB/TrEMBL;Acc:Q9LR00]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.